##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841212.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 14216995 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 35.88843725414548 37.0 35.0 39.0 30.0 39.0 2 36.74115127704554 38.0 35.0 39.0 32.0 39.0 3 37.026242817135405 38.0 37.0 39.0 33.0 39.0 4 37.52445759459014 39.0 37.0 40.0 33.0 41.0 5 38.13556753730307 39.0 37.0 41.0 33.0 41.0 6 38.14520480593824 40.0 37.0 41.0 33.0 41.0 7 38.10600636773101 40.0 37.0 41.0 33.0 41.0 8 38.04433060572927 39.0 37.0 41.0 33.0 41.0 9 37.992706334918175 39.0 37.0 40.0 33.0 41.0 10 37.83947486793095 39.0 37.0 40.0 33.0 41.0 11 37.762417022725266 39.0 37.0 40.0 33.0 41.0 12 37.69510680702919 39.0 36.0 40.0 33.0 41.0 13 37.611596895124464 39.0 36.0 40.0 32.0 41.0 14 37.49754276483884 39.0 36.0 40.0 32.0 41.0 15 37.46314984284653 39.0 36.0 40.0 32.0 41.0 16 37.40538186867197 39.0 36.0 40.0 32.0 41.0 17 37.38334718412717 39.0 36.0 40.0 32.0 41.0 18 37.29872655930455 39.0 36.0 40.0 32.0 41.0 19 37.1834055649594 38.0 36.0 40.0 31.0 41.0 20 37.08436290510055 38.0 35.0 40.0 31.0 41.0 21 36.876794006046985 38.0 35.0 40.0 31.0 41.0 22 36.86581665112775 38.0 35.0 40.0 31.0 41.0 23 36.87859297974009 38.0 35.0 40.0 31.0 41.0 24 36.88521125596513 38.0 35.0 40.0 31.0 41.0 25 36.88611232868945 38.0 35.0 40.0 31.0 41.0 26 36.91718700942837 38.0 35.0 40.0 31.0 41.0 27 36.95537905704845 38.0 35.0 40.0 31.0 41.0 28 36.940846289600486 38.0 35.0 40.0 31.0 41.0 29 36.966797426620545 38.0 35.0 40.0 31.0 41.0 30 37.0114950535764 38.0 35.0 40.0 31.0 41.0 31 36.97729250027876 38.0 35.0 40.0 31.0 41.0 32 36.907973216465294 38.0 35.0 40.0 31.0 41.0 33 36.846076392172776 38.0 35.0 40.0 31.0 41.0 34 36.81713237008382 38.0 35.0 40.0 31.0 41.0 35 36.72943561554561 38.0 35.0 40.0 31.0 41.0 36 36.639191161361964 38.0 35.0 40.0 31.0 41.0 37 36.5784809276856 38.0 35.0 40.0 31.0 41.0 38 36.49275533288219 38.0 35.0 40.0 31.0 41.0 39 36.36641845691747 38.0 34.0 40.0 31.0 41.0 40 36.240069500730485 37.0 34.0 40.0 31.0 41.0 41 36.09444130034959 37.0 34.0 40.0 30.0 41.0 42 35.95881113111646 37.0 34.0 40.0 30.0 41.0 43 35.8354043593748 37.0 34.0 40.0 30.0 41.0 44 35.73648660538708 36.0 34.0 40.0 30.0 41.0 45 35.64526027355799 36.0 34.0 39.0 30.0 41.0 46 35.56776363803718 36.0 34.0 39.0 30.0 41.0 47 35.538166964852124 36.0 34.0 39.0 30.0 41.0 48 35.54871439894145 36.0 34.0 39.0 30.0 40.0 49 35.58353750243511 36.0 34.0 39.0 30.0 40.0 50 36.0257674505369 37.0 34.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 18.0 21 55.0 22 139.0 23 399.0 24 1070.0 25 2604.0 26 6908.0 27 17464.0 28 43104.0 29 99130.0 30 201760.0 31 364981.0 32 591718.0 33 876546.0 34 1211418.0 35 1434065.0 36 1767361.0 37 2061432.0 38 2230022.0 39 2186094.0 40 1120707.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 42.58058049538598 32.11645639602462 25.302963108589406 2 30.06656469950225 26.429959354983247 23.595204190477663 19.90827175503684 3 26.178408306396676 20.035225446727665 24.93806883944181 28.848297407433847 4 21.72504808505595 21.498741471035192 29.7744213879234 27.00178905598546 5 24.075214206659002 22.98283849716484 25.640945924226603 27.301001371949557 6 26.149850935447326 23.53531108367134 25.18907828271727 25.125759698164064 7 31.155606371107258 21.706359184905107 22.43613365552988 24.70190078845776 8 29.025993186323834 20.25389331571123 24.977584925647086 25.742528572317845 9 28.18011119790082 22.219688478472417 25.170593363787496 24.429606959839262 10 27.079280818485202 20.642301695963177 26.759930632317168 25.518486853234457 11 28.484655160953494 22.263741388387633 25.028390317363126 24.223213133295747 12 28.40883745123354 22.124780939994704 24.94342862187122 24.52295298690054 13 27.939736913461672 20.28996985649921 23.765465205551525 28.004828024487594 14 26.603005768799946 22.85791758384947 23.29489459622093 27.244182051129652 15 25.8215537108932 23.715609381588727 24.21274678650446 26.25009012101362 16 27.28228433645788 23.729226886553732 23.786496372827028 25.201992404161356 17 28.570186597097347 22.258487113486357 21.201372019895906 27.969954269520386 18 28.455858639607033 21.875881647282004 21.69661732314037 27.971642389970597 19 26.544132568098956 22.03097771364483 24.318824055294385 27.106065662961825 20 29.81715193681928 19.92206510588208 23.921159147907133 26.339623809391504 21 29.904673948327336 23.005860239804544 22.82686320140086 24.26260261046726 22 28.830325958474347 21.43146283725921 23.58006737710747 26.158143827158973 23 28.81736260018379 22.232736242785485 24.224809813888236 24.725091343142484 24 30.280048631936634 21.42600458113687 22.917972468865607 25.375974318060884 25 26.933168413738624 23.886982803451687 24.116478063801516 25.063370719008176 26 27.97773373445057 23.186746870038718 23.342152434826993 25.493366960683716 27 28.114499700207098 22.995630783289325 23.899500422299038 24.990369094204542 28 27.617489537428053 22.114089110312804 24.34094920014422 25.927472152114923 29 28.978967968228865 21.909861038098562 24.35043373135603 24.760737262316542 30 26.8606332695255 23.65149485475651 24.868272552684857 24.61959932303313 31 27.44742771661816 22.198505877783706 26.129455669859308 24.224610735738825 32 26.739039995842827 22.642316607169185 25.778782057944184 24.839861339043804 33 25.35418461911199 21.959267003613505 27.230291964869046 25.456256412405466 34 25.062985125644072 22.52742898148367 28.04873925386454 24.360846639007715 35 26.858460273689943 21.95447599118828 25.347531637409805 25.83953209771197 36 25.734502850978313 23.27036273273216 24.870059563271845 26.125074853017676 37 24.80028514483939 24.614007867191823 25.938206345647025 24.64750064232176 38 26.59693947716068 24.304448484308377 23.22129870263093 25.87731333590001 39 25.992930175862178 25.058834828467813 24.837265583621154 24.110969412048853 40 25.61884363878861 24.079506051311416 24.576078214343116 25.725572095556853 41 25.824777398776895 25.034478084180336 23.87393699677445 25.266807520268326 42 25.093329353797607 25.093902353012854 24.854927974419965 24.957840318769577 43 23.692568677294904 25.124017168426477 26.01362009814729 25.169794056131334 44 23.579888086454517 24.15280548002062 24.960477619848145 27.306828813676713 45 25.132248201386627 24.078133934611763 26.038433122658883 24.751184741342726 46 24.518097486744235 24.835334196900245 25.097603884133136 25.54896443222238 47 27.884041101202527 23.934801788980153 23.732017371618873 24.44913973819844 48 23.813687816560336 25.47117746242091 24.29881696131862 26.41631775970013 49 25.85394797542523 24.31867121691145 23.267476039046592 26.559904768616725 50 23.311550524069908 27.543662776462906 24.326695503142087 24.8180911963251 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 21545.0 1 21218.0 2 16556.0 3 11990.0 4 11365.5 5 9621.5 6 7329.0 7 6647.0 8 6963.0 9 7177.0 10 7346.0 11 7495.0 12 7730.5 13 8165.0 14 8910.5 15 10123.0 16 11511.5 17 13584.5 18 16174.0 19 19932.5 20 24205.0 21 29919.0 22 36608.5 23 45690.5 24 55911.0 25 66093.5 26 77984.0 27 93037.5 28 109802.5 29 126810.0 30 146549.0 31 175022.0 32 207706.5 33 232456.5 34 265123.0 35 312713.5 36 348297.5 37 376711.0 38 411226.5 39 462561.0 40 527661.5 41 612953.0 42 723339.0 43 842277.5 44 909345.5 45 880715.0 46 867143.0 47 897042.5 48 961868.5 49 1054681.0 50 1181554.0 51 1294553.5 52 1347785.5 53 1350497.5 54 1266883.0 55 1128555.5 56 1003749.5 57 941731.0 58 915672.5 59 888964.5 60 867679.0 61 838786.5 62 796459.0 63 743366.0 64 661666.5 65 585879.5 66 526701.0 67 482279.0 68 431406.0 69 369686.0 70 318226.0 71 280413.5 72 258776.5 73 236873.0 74 200154.0 75 164509.0 76 140033.5 77 109473.5 78 85488.5 79 71507.5 80 56103.5 81 41559.5 82 31017.5 83 23860.0 84 18122.0 85 13633.0 86 10082.5 87 6962.5 88 4647.5 89 3354.5 90 2481.0 91 1750.0 92 1276.5 93 1053.5 94 673.5 95 268.0 96 158.0 97 145.0 98 85.5 99 25.0 100 24.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 143066.0 25 126552.0 26 119498.0 27 126659.0 28 119080.0 29 102603.0 30 116507.0 31 123254.0 32 139193.0 33 116962.0 34 131194.0 35 130829.0 36 118880.0 37 124850.0 38 139513.0 39 156037.0 40 158013.0 41 156924.0 42 164969.0 43 166543.0 44 170308.0 45 207962.0 46 597616.0 47 1494768.0 48 2566517.0 49 3067858.0 50 3430840.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.09691496659457 #Duplication Level Percentage of deduplicated Percentage of total 1 57.24311662551155 12.076531638712732 2 12.068365263792995 5.092105515120889 3 6.76688005908046 4.282808795866947 4 4.602702557981416 3.8841129792904496 5 3.287470235667108 3.46777400085398 6 2.6123501363812482 3.3067517214124154 7 2.095224191937245 3.094193662927632 8 1.6166488776827237 2.7285043122650374 9 1.3483660093678742 2.5601726739132453 >10 7.761391715915932 27.919169081282107 >50 0.3517175718972267 5.108045696483429 >100 0.2052786195704461 8.338502624674945 >500 0.02059802155289072 2.99693156074175 >1k 0.016857231510180135 7.400840528679943 >5k 0.0016927714330018993 2.4697851538801636 >10k+ 0.0013401107177931704 5.273770053894305 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCG 52537 0.36953660038566516 No Hit TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA 46239 0.3252375062381326 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTG 37067 0.2607231696993633 Illumina Single End Adapter 1 (100% over 32bp) ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGT 36390 0.2559612632627359 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 31906 0.22442154618468954 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAA 27356 0.19241759598283603 No Hit ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTG 26039 0.18315403501232153 No Hit TCGGAAGAGCTCGTATGCCGTCTTCTGCTTG 22521 0.15840900274636097 Illumina Single End Adapter 1 (100% over 31bp) AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTG 22342 0.1571499462439144 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAA 21338 0.15008797569387905 Illumina Single End Adapter 1 (100% over 32bp) CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGA 20563 0.14463675340675017 No Hit TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGC 18817 0.13235567713148946 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAA 17557 0.12349304476789925 Illumina Single End Adapter 1 (100% over 32bp) ATTCCTGCTCACCGCAGTGTAGACAGGGAAACTTTCTTTGCAGTTCAGG 17485 0.12298660863283696 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGAC 16917 0.11899139023401217 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 16447 0.11568548768568884 No Hit ATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGC 16119 0.11337838973707172 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCC 15534 0.10926359613969057 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA 15003 0.10552862964360611 No Hit AAGCAGTGGTATCAACGCAGAGTGCAG 14613 0.10278543391201866 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCGC 14575 0.10251814817406914 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAA 14498 0.10197654286296086 Illumina Single End Adapter 1 (100% over 32bp) >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.3578322985975588 0.0 0.0 0.0 0.0 2 0.8141945608055711 0.0 0.0 0.0 0.0 3 1.049469314718054 0.0 0.0 0.0 0.0 4 1.2281498305373253 0.0 0.0 0.0 0.0 5 1.5006757757177238 0.0 0.0 0.0 0.0 6 1.7263141753936047 0.0 0.0 0.0 0.0 7 1.9477744769552217 0.0 0.0 0.0 0.0 8 2.127313120670015 0.0 0.0 0.0 0.0 9 2.280622592889707 0.0 0.0 0.0 0.0 10 2.4175150937311294 0.0 0.0 0.0 0.0 11 2.552986759860294 0.0 0.0 0.0 0.0 12 2.672758905802527 0.0 0.0 0.0 0.0 13 2.758642033706842 0.0 0.0 0.0 0.0 14 2.8510736621909203 0.0 0.0 0.0 0.0 15 2.9561099233698824 0.0 0.0 0.0 0.0 16 3.030345020167764 6.330451688278712E-5 0.0 0.0 0.0 17 3.1068379780677984 6.330451688278712E-5 0.0 0.0 0.0 18 3.1860741316994203 6.330451688278712E-5 0.0 0.0 0.0 19 3.3592963913963536 6.330451688278712E-5 0.0 0.0 0.0 20 3.4139633586422446 6.330451688278712E-5 0.0 0.0 0.0 21 3.5030750169075815 6.330451688278712E-5 0.0 0.0 0.0 22 3.536999204121546 6.330451688278712E-5 0.0 0.0 0.0 23 3.5693759475894873 6.330451688278712E-5 0.0 0.0 0.0 24 3.595647322095844 6.330451688278712E-5 0.0 0.0 0.0 25 3.637203220511789 6.330451688278712E-5 0.0 0.0 0.0 26 3.769376017927839 6.330451688278712E-5 0.0 0.0 0.0 27 3.7968642459253874 6.330451688278712E-5 0.0 0.0 0.0 28 3.819555398310262 6.330451688278712E-5 0.0 0.0 0.0 29 3.83993241891131 6.330451688278712E-5 0.0 0.0 0.0 30 3.8602179996546386 6.330451688278712E-5 0.0 0.0 0.0 31 3.879532911139098 6.330451688278712E-5 0.0 0.0 0.0 32 3.8980529992449178 6.330451688278712E-5 0.0 0.0 0.0 33 3.91506081278076 6.330451688278712E-5 0.0 0.0 0.0 34 3.9333698858303037 6.330451688278712E-5 0.0 0.0 0.0 35 3.951981413793843 6.330451688278712E-5 0.0 0.0 0.0 36 3.96780754301454 6.330451688278712E-5 0.0 7.033835209198569E-6 0.0 37 3.983289014309986 6.330451688278712E-5 0.0 1.4067670418397137E-5 0.0 38 3.9933192633183032 6.330451688278712E-5 0.0 1.4771053939316995E-4 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAGCCA 7275 0.0 108.98502 44 TTAAGCC 6100 0.0 71.28332 43 ATTAGTC 1820 0.0 67.998024 44 CTATCAT 4350 0.0 64.675766 44 TCGTGCG 11020 0.0 60.747295 43 CGTGCGC 4160 0.0 60.29158 44 AATCGCA 635 0.0 58.467594 44 ACTTCTA 3200 0.0 56.20603 44 ATTAAGC 7800 0.0 54.76586 42 AACGACA 1925 0.0 51.101067 43 CGCTACC 1915 0.0 48.683983 44 TACGCTA 3475 0.0 45.31276 42 CTCGTGC 12715 0.0 42.473248 42 AATCCCG 1790 0.0 41.8242 43 ACCTTAG 5590 0.0 41.220814 42 ATGTTCT 3430 0.0 41.131866 44 GATTAAG 9665 0.0 41.10679 41 CTAATCC 7600 0.0 40.799873 41 TGTGTTA 5160 0.0 40.305107 42 AGATTAA 8940 0.0 40.152565 40 >>END_MODULE