ERR841202.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR841202.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6219446
Sequences flagged as poor quality	0
Sequence length	24-50
%GC	53

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATTCCTGCTCACCGCAGTGTAGACAGGGAAACTTTCTTTGCAGTTCAGG	16715	0.26875384077617204	No Hit
CGGCAAGTTTGAATTTCGTGGAGGCTCGGG	13984	0.22484317735052287	No Hit
CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGAC	12977	0.20865202463370533	No Hit
CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCC	10701	0.17205712534524778	No Hit
CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCCG	10368	0.16670295071297347	No Hit
CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGA	10207	0.1641142957105826	No Hit
CGGCAAGTTTGAATTTCGTGGAGGCTCGGGTTGTGAGGGTTCCTGCTT	9659	0.15530322154095397	No Hit
AAGCAGTGGTATCAACGCAGAGTGCAG	8282	0.1331629858993872	No Hit
CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGG	7638	0.12280836588982363	No Hit
TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACCTG	7583	0.1219240427523609	No Hit
TCGCTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATC	7463	0.11999461045244222	No Hit
CTCTTTCCCTTCGGTGTGCCACTGAAGATCCTGGTGTCGCCATGGGCCG	7421	0.11931930914747069	No Hit
ATTCCTGCTCACCGCAGTGTAGACAGGGAAACTTTCTTTGCAGTTCAGGA	7350	0.1181777283700188	No Hit
CGGCAAGTTTGAATTTCGTGGAGGCTCGGGTTGTGAGGG	6767	0.10880390311291392	No Hit
ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTG	6326	0.10171323941071278	Illumina Single End Adapter 1 (100% over 32bp)
CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTAG	6292	0.10116656692573582	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTATACG	370	100.852516	44
TAAGCCA	1685	62.831863	44
ATGTTCT	1490	59.98891	44
AATCCCG	1685	58.994835	43
TTCAGGA	2540	57.739502	44
TCGTGCG	1835	55.365593	43
CGCTACC	830	51.231613	44
TTAAGCC	1205	47.607162	43
ACGCTAC	1435	47.605896	43
TTTGGAC	2665	46.83124	43
CACATGC	2225	46.412712	44
CGTGCGC	1615	46.21106	44
ATTAAGC	1235	45.47957	42
ACTTCTA	1155	44.32922	44
TACGCTA	1210	43.825974	42
AACGACA	970	43.791325	43
CTAATCC	5300	42.378635	41
CGGTCAC	825	42.075188	44
CTATCAT	875	41.654438	44
CTCGTGC	2055	41.53243	42