##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841200.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4012829 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 35.36658576779624 37.0 35.0 39.0 30.0 39.0 2 36.16333015934644 37.0 35.0 39.0 32.0 39.0 3 36.39845679943003 37.0 35.0 39.0 32.0 39.0 4 36.80614773268435 38.0 35.0 39.0 33.0 40.0 5 37.46004252860015 39.0 35.0 40.0 33.0 41.0 6 37.52495757980218 39.0 35.0 40.0 33.0 41.0 7 37.499826930078505 39.0 35.0 40.0 33.0 41.0 8 37.38337840959582 39.0 35.0 40.0 33.0 41.0 9 37.33603500174067 38.0 35.0 40.0 33.0 41.0 10 37.25003482580494 39.0 35.0 40.0 32.0 41.0 11 37.13044388385351 38.0 35.0 40.0 32.0 41.0 12 37.06791517904202 38.0 35.0 40.0 32.0 41.0 13 36.978049401058456 38.0 35.0 40.0 32.0 41.0 14 36.90731152511109 38.0 35.0 40.0 31.0 41.0 15 36.83720163505597 38.0 35.0 40.0 31.0 41.0 16 36.817836244704175 38.0 35.0 40.0 31.0 41.0 17 36.80774062388405 38.0 35.0 40.0 31.0 41.0 18 36.695573123100935 38.0 35.0 40.0 31.0 41.0 19 36.59449106852049 38.0 35.0 40.0 31.0 41.0 20 36.498899155682935 38.0 35.0 40.0 31.0 41.0 21 36.306872533068315 38.0 34.0 40.0 31.0 41.0 22 36.249548635139945 38.0 34.0 40.0 30.0 41.0 23 36.31900312722022 38.0 34.0 40.0 31.0 41.0 24 36.319603451829124 38.0 34.0 40.0 31.0 41.0 25 36.29949989797687 38.0 34.0 40.0 31.0 41.0 26 36.303171141829914 38.0 34.0 40.0 31.0 41.0 27 36.34974142541273 38.0 34.0 40.0 31.0 41.0 28 36.34836682398729 38.0 34.0 40.0 31.0 41.0 29 36.38963946443517 38.0 35.0 40.0 31.0 41.0 30 36.422980435191604 38.0 35.0 40.0 31.0 41.0 31 36.37935714229081 38.0 35.0 40.0 31.0 41.0 32 36.31618066933396 37.0 34.0 40.0 31.0 41.0 33 36.217696050091526 37.0 34.0 40.0 31.0 41.0 34 36.20126648072573 37.0 34.0 40.0 31.0 41.0 35 36.131927942373736 37.0 34.0 40.0 31.0 41.0 36 36.064497210731325 37.0 34.0 40.0 31.0 41.0 37 35.98754506498068 37.0 34.0 40.0 31.0 41.0 38 35.89317127687871 36.0 34.0 40.0 31.0 41.0 39 35.767411654951665 36.0 34.0 40.0 30.0 41.0 40 35.65954580295227 36.0 34.0 40.0 30.0 41.0 41 35.54200887974354 35.0 34.0 39.0 30.0 41.0 42 35.43176323271379 35.0 34.0 39.0 30.0 41.0 43 35.345121106994114 35.0 34.0 39.0 30.0 41.0 44 35.24379411198202 35.0 34.0 39.0 30.0 40.0 45 35.188833088509035 35.0 34.0 39.0 30.0 40.0 46 35.1204152029927 35.0 33.0 39.0 30.0 40.0 47 35.11977172833064 35.0 33.0 39.0 30.0 40.0 48 35.17367114012482 35.0 33.0 39.0 30.0 40.0 49 35.25037114523482 35.0 33.0 39.0 30.0 40.0 50 35.79497671599019 36.0 34.0 39.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 3.0 21 27.0 22 166.0 23 501.0 24 1312.0 25 3189.0 26 6994.0 27 14266.0 28 28145.0 29 52303.0 30 91783.0 31 149529.0 32 228238.0 33 335520.0 34 489065.0 35 354483.0 36 426208.0 37 501265.0 38 533091.0 39 519077.0 40 277663.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 57.12329132390141 13.864732337211477 29.011976338887102 2 28.19940745045453 22.74537489636364 30.11311969685227 18.94209795632956 3 28.629328585892893 17.409189377369433 24.58365407546646 29.377827961271212 4 23.238617942603586 19.51972037682144 29.606046008937838 27.635615671637144 5 23.465465386140302 21.997598203162905 26.4311038422021 28.105832568494694 6 25.76361963093867 24.113810979735245 24.649193872950978 25.473375516375107 7 31.208930158748355 23.21524291216994 21.128086943151576 24.447739985930124 8 28.85821947558692 20.37415499140382 25.491243210214044 25.276382322795214 9 26.875054979915664 23.153490966098982 24.49862677926221 25.47282727472314 10 28.882715909399575 20.535587237831464 25.326820554775697 25.254876297993263 11 28.235292358582935 21.390096612639116 24.742394953784476 25.632216074993476 12 29.04541907965677 19.73834419557873 25.27919829128029 25.937038433484204 13 26.700190813014956 19.538883914565012 24.60914731228268 29.15177796013735 14 26.793342053698275 21.995828877831574 23.1771401173586 28.033688951111547 15 24.530923196577774 22.878099216288557 25.130973684649906 27.46000390248376 16 26.064654138015847 26.712875131235347 22.728055444176665 24.494415286572142 17 28.212739690627238 22.836083969688218 20.97024318753677 27.980933152147774 18 27.96924563693095 21.779946267334093 22.371872810927155 27.8789352848078 19 26.149706354295187 21.353115221206785 24.073839179292214 28.423339245205813 20 28.616145866170722 19.524629631614008 23.983703267694686 27.875521234520583 21 29.929035102168573 22.322356621724975 22.875931169755802 24.872677106350658 22 27.414549685521113 21.94347180006923 24.01071662909135 26.631261885318313 23 27.92299397756545 23.326984528869783 22.843784272890773 25.906237220673994 24 29.51037784067051 21.390370733465094 23.033500804544623 26.065750621319772 25 26.852009100815206 23.862668567743732 24.1210349044895 25.164287426951564 26 27.682413076875616 22.761878865291656 23.698599983395702 25.857108074437026 27 27.894285605302105 22.198988639409475 24.17496389735046 25.73176185793796 28 28.46083428980349 22.01107595018404 23.628865830342587 25.899223929669883 29 29.317863287511354 21.237742423008587 24.37859083166673 25.06580345781333 30 26.559385925055985 23.899692427984704 25.228713778796553 24.31220786816276 31 27.275201983228193 22.576954486710203 26.31739051147941 23.830453018582194 32 27.216659656598218 21.847116141409394 25.747985861087557 25.188238340904828 33 25.993782303949907 22.008824019435632 26.630916579559695 25.366477097054762 34 24.78018657872767 22.84522338669255 27.938429619502486 24.436160415077296 35 27.23226696091437 22.772733596999114 24.993559887535664 25.001439554550853 36 26.245957773238942 23.410428597115594 23.39144564892457 26.952167980720898 37 25.47852476290832 24.24949771689498 25.680449596066033 24.591527924130663 38 27.327695081333385 24.457358696667324 22.61165581284705 25.60329040915224 39 26.09829571435465 24.92825088408238 24.6016746438969 24.371778757666068 40 26.44177767453045 24.16645488348723 23.181859598959804 26.209907843022524 41 25.79048713522672 24.89561050891573 23.420471077120204 25.893431278737346 42 25.327819540786788 25.116930119131613 24.82592661406579 24.72932372601581 43 24.940997061128467 25.094251840918936 24.872406239282686 25.09234485866991 44 23.627920300620893 24.226058227509558 25.1453786162164 27.000642855653144 45 26.133114541381318 23.218673868222844 26.24514381703834 24.4030677733575 46 24.89038679003234 24.75886994339581 24.722157991263884 25.628585275307962 47 28.029271836357815 24.086733557272716 23.924239181238015 23.959755425131455 48 24.63567671235403 24.794537494218005 23.887744015539543 26.682041777888422 49 26.50918217427169 24.48170013879871 22.322060214163837 26.687057472765762 50 23.64378679746126 28.803743811597 23.588952265483638 23.963517125458104 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 6902.0 1 6861.5 2 4612.5 3 2394.5 4 2345.0 5 1897.5 6 1329.0 7 1302.5 8 1547.0 9 1730.0 10 1818.0 11 1821.5 12 1777.5 13 1794.5 14 1944.0 15 2203.0 16 2468.5 17 2916.5 18 3473.5 19 4388.5 20 5555.0 21 7244.0 22 9253.5 23 11634.0 24 14129.5 25 16798.0 26 20086.5 27 24940.0 28 30178.0 29 35352.0 30 41302.5 31 48987.0 32 57327.5 33 65625.5 34 75112.0 35 86413.5 36 98078.0 37 107979.0 38 116369.0 39 130735.5 40 149351.5 41 177832.5 42 218529.5 43 256017.5 44 269091.5 45 249749.5 46 237281.5 47 240740.5 48 256165.5 49 280454.0 50 308039.5 51 327276.5 52 341296.0 53 351160.5 54 337185.0 55 308410.5 56 279802.5 57 264344.0 58 256381.5 59 251601.5 60 252861.0 61 249224.5 62 242583.0 63 230874.5 64 200621.5 65 171731.5 66 154382.5 67 142282.5 68 129897.5 69 115087.0 70 100722.5 71 89511.5 72 84086.5 73 77958.5 74 65255.5 75 52842.0 76 44338.5 77 34735.5 78 27474.5 79 22900.5 80 17563.5 81 12467.0 82 9116.5 83 7019.5 84 5531.5 85 4333.0 86 3109.5 87 2081.0 88 1421.5 89 1055.0 90 776.0 91 529.5 92 395.0 93 345.5 94 223.0 95 84.5 96 50.0 97 45.0 98 27.5 99 10.0 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 38240.0 25 35850.0 26 32516.0 27 32605.0 28 29975.0 29 27301.0 30 32612.0 31 34361.0 32 46068.0 33 34394.0 34 39312.0 35 36897.0 36 33948.0 37 36027.0 38 41147.0 39 46459.0 40 44929.0 41 42462.0 42 44077.0 43 43197.0 44 45221.0 45 58221.0 46 180907.0 47 373195.0 48 780845.0 49 733333.0 50 1088730.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.172007431688755 #Duplication Level Percentage of deduplicated Percentage of total 1 57.21713897638938 13.25835969580863 2 12.422884140972517 5.757263272752471 3 6.7914465860660895 4.721143522927219 4 4.694289226906756 4.351044194095192 5 3.453331916420078 4.001031641568701 6 2.6568629431595747 3.693890871832327 7 2.0592450594795455 3.340178927534986 8 1.687703667883704 3.128598554775165 9 1.3534924289244372 2.822682295959437 >10 7.173646249445276 27.805694700368445 >50 0.27642831240222443 4.406404620841299 >100 0.17616499986812945 8.022773761649308 >500 0.021737786274716345 3.490370715938375 >1k 0.013277674859096561 6.242305290951082 >5k 0.001645021663958866 2.532590098545813 >10k+ 7.050092845537998E-4 2.425667834451578 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCG 17684 0.44068660787688685 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTG 17418 0.4340578679031676 Illumina Single End Adapter 1 (100% over 32bp) ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGT 15068 0.37549569144361744 No Hit TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA 14864 0.37041199612542675 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 12510 0.31175013936551993 No Hit ATTCCTGCTCACCGCAGTGTAGACAGGGAAACTTTCTTTGCAGTTCAGG 11545 0.28770226690447065 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAA 9436 0.23514582854141058 Illumina Single End Adapter 1 (100% over 32bp) CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA 9080 0.22627428180966594 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTG 8023 0.199933762440413 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAA 7598 0.18934273052751563 Illumina Single End Adapter 1 (100% over 32bp) ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAA 7012 0.17473956652526185 Illumina Single End Adapter 1 (100% over 32bp) CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCC 6857 0.17087695488644047 No Hit TCGGAAGAGCTCGTATGCCGTCTTCTGCTTG 6599 0.16444757551343453 Illumina Single End Adapter 1 (100% over 31bp) AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAA 6098 0.15196261789376025 No Hit TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGC 6075 0.15138945616670932 No Hit ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTC 5374 0.13392048352920097 No Hit ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTG 5361 0.13359652255304177 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGA 5266 0.13122911541957058 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAA 5184 0.12918566926225863 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTAG 5053 0.1259211394255773 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGG 4910 0.12235756868782598 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA 4896 0.1220086876365776 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCGC 4871 0.12138568575934833 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGGTTGTGAGGGTTCCTGCTT 4343 0.10822788611226644 No Hit ATTCCTGCTCACCGCAGTGTAGACAGGGAAACTTTCTTTGCAGTTCA 4339 0.10812820581190974 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGA 4175 0.10404131349728582 Illumina Single End Adapter 1 (100% over 32bp) ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAA 4070 0.10142470561292295 Illumina Single End Adapter 1 (100% over 32bp) TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACCTG 4029 0.10040298253426697 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.4747523505237826 0.0 0.0 0.0 0.0 2 0.8264992104074208 0.0 0.0 0.0 0.0 3 1.0114809277943315 0.0 0.0 0.0 0.0 4 1.1566902053389267 0.0 0.0 0.0 0.0 5 1.396346567471477 0.0 0.0 0.0 0.0 6 1.5528944791816446 0.0 0.0 0.0 0.0 7 1.698004076425883 0.0 0.0 0.0 0.0 8 1.8019706296979014 0.0 0.0 2.492007508917026E-5 0.0 9 1.897489277514691 0.0 0.0 2.492007508917026E-5 0.0 10 1.9801242465103797 0.0 0.0 2.492007508917026E-5 0.0 11 2.058647403116355 0.0 0.0 2.492007508917026E-5 0.0 12 2.117807661378045 0.0 0.0 2.492007508917026E-5 0.0 13 2.1585270640737493 0.0 0.0 2.492007508917026E-5 0.0 14 2.2049282438897846 0.0 0.0 2.492007508917026E-5 0.0 15 2.2598520893863157 0.0 0.0 2.492007508917026E-5 0.0 16 2.299350408402651 0.0 0.0 2.492007508917026E-5 0.0 17 2.3363567199100683 0.0 0.0 2.492007508917026E-5 0.0 18 2.3662358899419837 0.0 0.0 2.492007508917026E-5 0.0 19 2.4415941970116344 0.0 0.0 2.492007508917026E-5 0.0 20 2.4656669895477727 0.0 0.0 2.492007508917026E-5 0.0 21 2.50930204102891 0.0 0.0 2.492007508917026E-5 0.0 22 2.5272195750180235 0.0 0.0 2.492007508917026E-5 0.0 23 2.546457872986863 0.0 0.0 2.492007508917026E-5 0.0 24 2.5627306820200912 0.0 0.0 2.492007508917026E-5 0.0 25 2.582193260664733 0.0 0.0 2.492007508917026E-5 0.0 26 2.644842329438907 0.0 0.0 2.492007508917026E-5 0.0 27 2.6602180157689252 0.0 0.0 2.492007508917026E-5 0.0 28 2.6749208600715355 0.0 0.0 2.492007508917026E-5 0.0 29 2.689723384674503 0.0 0.0 2.492007508917026E-5 0.0 30 2.7041770282262214 0.0 0.0 2.492007508917026E-5 0.0 31 2.7183814710270484 0.0 0.0 1.246003754458513E-4 0.0 32 2.731937991875557 0.0 0.0 1.246003754458513E-4 0.0 33 2.7449213509970147 0.0 0.0 1.246003754458513E-4 0.0 34 2.757231868091065 0.0 0.0 1.246003754458513E-4 0.0 35 2.7704893480385033 0.0 0.0 1.246003754458513E-4 0.0 36 2.784893151440044 0.0 0.0 1.246003754458513E-4 0.0 37 2.796929547708113 0.0 0.0 1.246003754458513E-4 0.0 38 2.804654770985756 0.0 0.0 1.246003754458513E-4 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAGCCA 2180 0.0 103.47429 44 CTATACG 295 0.0 79.44492 44 TCGTGCG 3100 0.0 72.48681 43 TTAAGCC 2005 0.0 70.402885 43 CGTGCGC 1500 0.0 63.961437 44 ATTAAGC 2695 0.0 50.550556 42 AATCCCG 600 0.0 49.104736 43 TACGCTA 565 0.0 48.33295 42 CTCGTGC 3745 0.0 47.3563 42 CTAATCC 2550 0.0 45.151783 41 TGTGTTA 2055 0.0 44.643795 42 ATTAGTC 390 0.0 43.191814 44 CCTTAGC 2955 0.0 42.858284 43 ACGCTAC 870 0.0 42.45803 43 ACCTTAG 2155 0.0 42.429775 42 AACGACA 315 0.0 41.88037 43 GATTAAG 2995 0.0 41.310635 41 CAATGAA 1665 0.0 40.673008 43 ATAAGAT 1490 0.0 40.432823 43 AACCTTA 2695 0.0 40.033634 41 >>END_MODULE