##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841197.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2801962 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 35.350884487369925 37.0 35.0 39.0 30.0 39.0 2 36.36373227045906 37.0 35.0 39.0 32.0 39.0 3 36.5900608216671 38.0 35.0 39.0 32.0 39.0 4 36.80018751146518 38.0 35.0 39.0 33.0 40.0 5 37.57424333377826 39.0 36.0 40.0 33.0 41.0 6 37.641590428421225 39.0 36.0 40.0 33.0 41.0 7 37.06424855155066 38.0 35.0 40.0 31.0 41.0 8 37.31938370327649 38.0 35.0 40.0 33.0 41.0 9 37.34097571630165 39.0 35.0 40.0 33.0 41.0 10 36.46320078573514 38.0 35.0 40.0 30.0 41.0 11 36.76859250767855 38.0 35.0 40.0 31.0 41.0 12 36.81081256633745 38.0 35.0 40.0 31.0 41.0 13 36.784756538454126 38.0 35.0 40.0 31.0 41.0 14 36.752943830073356 38.0 35.0 40.0 31.0 41.0 15 36.72795598227242 38.0 35.0 40.0 31.0 41.0 16 36.54217187813396 38.0 35.0 40.0 31.0 41.0 17 36.37277950236299 38.0 34.0 40.0 31.0 41.0 18 36.35736066370636 38.0 34.0 40.0 31.0 41.0 19 36.26231512061905 38.0 34.0 40.0 30.0 41.0 20 36.05394612774906 38.0 34.0 40.0 30.0 41.0 21 35.83469476031438 37.0 34.0 40.0 30.0 41.0 22 35.69781995615929 37.0 34.0 40.0 30.0 41.0 23 35.223839224086554 37.0 33.0 39.0 28.0 41.0 24 35.49112336284361 37.0 33.0 39.0 30.0 41.0 25 35.5427213982381 37.0 33.0 39.0 30.0 41.0 26 35.6341471685442 37.0 34.0 39.0 30.0 41.0 27 35.645389014176764 37.0 34.0 39.0 30.0 41.0 28 35.34399220234934 36.0 33.0 39.0 29.0 41.0 29 35.38678892550124 36.0 33.0 39.0 29.0 41.0 30 35.52288068446922 36.0 34.0 39.0 30.0 41.0 31 35.4637411787179 36.0 34.0 39.0 30.0 41.0 32 35.46077935212419 36.0 34.0 39.0 30.0 41.0 33 35.40288980699084 36.0 34.0 39.0 30.0 41.0 34 35.34697389585794 35.0 34.0 39.0 30.0 40.0 35 35.2323961620605 35.0 34.0 39.0 30.0 40.0 36 35.1047129983554 35.0 33.0 39.0 30.0 40.0 37 35.01924972648337 35.0 33.0 38.0 30.0 40.0 38 34.94942616772542 35.0 33.0 38.0 30.0 40.0 39 34.792485338793696 35.0 33.0 38.0 29.0 40.0 40 34.62677960451793 35.0 33.0 38.0 29.0 40.0 41 34.47936448515112 35.0 33.0 37.0 29.0 40.0 42 34.315835543119256 35.0 33.0 37.0 29.0 40.0 43 34.21146674328132 35.0 33.0 37.0 29.0 40.0 44 34.11156457279598 35.0 33.0 36.0 29.0 39.0 45 34.0223350401208 35.0 33.0 36.0 29.0 39.0 46 33.9568498954526 35.0 33.0 36.0 29.0 39.0 47 33.937855824722995 35.0 33.0 36.0 29.0 39.0 48 33.911912451085314 35.0 33.0 36.0 29.0 39.0 49 33.860742372798306 35.0 33.0 36.0 29.0 39.0 50 34.02817065833311 35.0 33.0 36.0 29.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 5.0 21 14.0 22 68.0 23 242.0 24 679.0 25 1903.0 26 4423.0 27 10487.0 28 22626.0 29 44405.0 30 79001.0 31 127153.0 32 188438.0 33 264392.0 34 349222.0 35 339176.0 36 391449.0 37 387610.0 38 312915.0 39 210381.0 40 67373.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 57.8203416034907 18.75649990970613 23.423158486803175 2 24.482344871200965 32.47299570800746 17.991714377282776 25.0529450435088 3 37.52988084777738 16.93338453555045 21.023804034458713 24.512930582213464 4 19.15971736947182 17.567939893546022 25.356982000469667 37.91536073651249 5 20.040849947286937 30.837570245420885 23.013516957046527 26.108062850245652 6 36.09549308663001 18.589259954274898 22.14323391966058 23.17201303943451 7 28.79243187452221 18.734229800404144 29.770603598478495 22.70273472659515 8 37.71696404162512 17.269506153188374 22.170857420621694 22.842672384564818 9 36.84286225152233 18.221838840069925 21.585053616001932 23.350245292405823 10 26.0472126317202 18.107954354841358 33.20077145942736 22.64406155401108 11 29.02476907252846 27.87050645226452 21.996800813144503 21.10792366206251 12 28.51034382336377 18.212202735083487 30.452732763684875 22.824720677867866 13 25.64096158334767 18.070480613227446 22.177245801334923 34.11131200208997 14 23.794398353724997 29.359820011834564 19.832531633191312 27.013250001249123 15 22.53549477116392 30.234278694714632 21.607823375192098 25.62240315892935 16 24.55179620565875 21.774064030846958 20.972554231641972 32.701585531852324 17 35.54130998207685 20.547530623184755 17.274110070015226 26.63704932472318 18 23.969739775200377 19.981106096371043 21.807968844688112 34.241185283740464 19 24.545479203500975 28.514733604524256 22.193627179811863 24.746160012162907 20 35.34173554102446 17.519366786558844 21.80511370246991 25.333783969946772 21 28.014940959227857 28.06183667016184 20.706811869682742 23.216410500927566 22 34.452537186442925 19.785778679368242 21.548936066941664 24.212748067247166 23 26.129654863270808 21.062990861403545 28.109517545205826 24.697836730119825 24 37.44940152650179 19.23691327719648 19.857871020377864 23.45581417592387 25 27.479771466447854 21.773736956747676 21.608572697348578 29.137918879455892 26 27.10196941510977 27.523710495868286 20.56295541641679 24.811364672605148 27 32.594825741560435 21.368061413837232 21.345169769735453 24.691943074866877 28 27.806941187391665 22.717581693478063 26.250949216354368 23.224527902775897 29 30.195009370741676 21.446522253859648 23.839384477139046 24.51908389825963 30 27.7031349212906 22.382628304539708 23.087185007014487 26.8270517671552 31 29.04650028033884 20.549336238360343 25.690866388872124 24.713297092428693 32 27.871698758454812 20.84017936987155 26.229419851837925 25.05870201983571 33 25.267298331015297 20.51341453013882 28.243498569816566 25.975788569029312 34 25.76290683146364 21.097368354486544 28.169674642644328 24.970050171405493 35 28.995309110492595 19.968198923242888 25.30526013800879 25.73123182825573 36 26.964521127197383 22.553549268045646 23.819137578188496 26.66279202656848 37 25.272721647304923 22.554271457411765 27.59118868221278 24.581818213070527 38 27.808804876161595 22.27861097901411 22.95546442552873 26.957119719295562 39 27.402534697013486 22.726015182806915 25.28384060167335 24.587609518506248 40 25.83618679250932 22.39286625524425 25.014042012987915 26.75690493925852 41 25.98928692663326 24.910637522587052 23.213849495776724 25.886226055002965 42 25.20873440621721 23.204570999167043 25.868700268305382 25.717994326310368 43 23.573558959750166 24.73742479301409 26.067075881263506 25.621940365972236 44 23.411098155062973 23.05981065570496 25.66733687268051 27.86175431655155 45 26.424022146293304 22.11677136468789 26.08969829547104 25.369508193547762 46 24.423826815877355 23.013191226031633 25.024696139784357 27.53828581830665 47 27.961915022725464 21.65270623079671 24.433267313964993 25.95211143251283 48 24.564540363498807 24.15519009617881 24.00869568282021 27.27157385750217 49 26.504383323012508 23.132134991311077 23.5738043121051 26.789677373571312 50 23.55743881647058 22.99040794151115 25.827614916760638 27.624538325257635 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1837.0 1 1848.0 2 1623.5 3 1374.0 4 1301.5 5 1103.0 6 880.0 7 821.0 8 854.0 9 871.5 10 917.5 11 974.0 12 976.0 13 1011.5 14 1131.5 15 1331.0 16 1529.5 17 1727.5 18 2043.0 19 2572.0 20 3117.0 21 3936.5 22 4888.0 23 5970.5 24 7255.5 25 8691.5 26 10418.0 27 12980.5 28 15863.5 29 18018.0 30 20234.0 31 24292.5 32 29207.0 33 33376.0 34 38986.5 35 47090.0 36 53312.5 37 57076.0 38 60732.0 39 67777.5 40 77321.5 41 91450.0 42 110895.5 43 129362.5 44 140046.0 45 142324.0 46 146283.0 47 156439.5 48 191916.5 49 234893.5 50 289031.0 51 355009.0 52 384041.5 53 376582.5 54 342227.0 55 273289.0 56 212272.5 57 192567.0 58 187080.5 59 180124.0 60 171745.0 61 166731.5 62 165652.5 63 158888.0 64 141555.5 65 125154.5 66 112281.0 67 100480.5 68 90790.0 69 80711.0 70 70481.5 71 63255.5 72 57778.5 73 50988.5 74 42227.5 75 34434.5 76 28895.0 77 23175.0 78 18233.0 79 14395.5 80 10762.0 81 8084.5 82 6177.5 83 4713.0 84 3541.5 85 2644.5 86 1907.5 87 1287.5 88 823.0 89 569.0 90 381.0 91 231.5 92 163.5 93 139.0 94 98.0 95 46.5 96 28.0 97 24.0 98 15.0 99 6.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 50156.0 25 38767.0 26 35206.0 27 49349.0 28 55582.0 29 31020.0 30 39553.0 31 34356.0 32 29125.0 33 27315.0 34 27337.0 35 30429.0 36 26669.0 37 26600.0 38 30562.0 39 32009.0 40 31464.0 41 34684.0 42 34677.0 43 34266.0 44 36576.0 45 44689.0 46 98398.0 47 220719.0 48 518763.0 49 404192.0 50 779499.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.186502321776562 #Duplication Level Percentage of deduplicated Percentage of total 1 60.92154413437785 17.17165245189855 2 14.709161553694953 8.291996325692187 3 7.550249460245293 6.384453718235887 4 4.560626658205752 5.141924555610901 5 2.9263341442368485 4.124156207541298 6 1.993896948282344 3.3720588577286095 7 1.3973906469473119 2.7571288300226486 8 1.0439591565729291 2.3540445752466215 9 0.7895716398841911 2.0029736574724213 >10 3.69512289264911 17.52053998499525 >50 0.2116655684865943 4.146046010718899 >100 0.16445967388193486 9.328435036167157 >500 0.019414649693554453 3.8272963541612732 >1k 0.014192778396667381 7.605983493395713 >5k 0.001874517901446635 3.705811056917897 >10k+ 5.355765432704672E-4 2.265498884194641 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAGCAGTGGTATCAACGCAGAGTGCAG 22025 0.786056341948963 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGA 14595 0.5208850084333763 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCG 12193 0.43515936333183675 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGTGC 11216 0.40029093899203483 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGATCGGAAGAGCTCGTATGCCGTC 8869 0.31652820416550975 Illumina Single End Adapter 2 (100% over 25bp) AAGCAGTGGTATCAACGCAGAGTGCAGT 8480 0.30264507512949856 No Hit AAGCAGTGGTATCAACGCAGATCGGAAGAGCTCGTATGCCGTCTTCTGCT 8050 0.2872986857066584 Illumina Single End Adapter 2 (100% over 32bp) AAGCAGTGGTATCAACGCAGAGTG 8041 0.2869774822071106 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGATCGGAAGAGCTCGTATGCCG 7793 0.2781265413306819 Illumina Single End Adapter 2 (100% over 23bp) AAGCAGTGGTATCAACGCAGAGTGCAGTGCT 7763 0.2770558629988558 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCGC 7372 0.26310135540738955 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGG 7072 0.25239457208912897 No Hit AAGCAGTGGTATCAACGCAGATCGGAAGAGCTCGTATGCCGTCTTCTG 6118 0.2183470011370604 Illumina Single End Adapter 2 (100% over 30bp) AAGCAGTGGTATCAACGCAGAGTGCAGTG 6032 0.21527772325249236 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAAT 5980 0.21342188081066052 No Hit AAGCAGTGGTATCAACGCAGAGCG 5710 0.20378577582422602 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTG 5598 0.1997885767187421 No Hit ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGT 5315 0.18968851112184962 No Hit AAGCAGTGGTATCAACGCAGAGTGCA 4915 0.17541280003083554 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAA 4155 0.14828894895790878 No Hit AAGCAGTGGTATCAACGCAGAGTGC 4113 0.14678999929335232 No Hit AAGCAGTGGTATCAACGCAGAGATCGGAAGAGCTCGTATGCCGTCTTCTG 3864 0.13790336913919604 Illumina Single End Adapter 2 (100% over 30bp) ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGC 3611 0.12887398187412963 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGC 3596 0.1283386427082166 No Hit AAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTG 3584 0.1279103713754862 Illumina Single End Adapter 2 (100% over 34bp) AAGCAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTG 3566 0.12726796437639054 Illumina Single End Adapter 2 (100% over 34bp) CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCCG 3329 0.1188096055549647 No Hit ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTG 3294 0.11756048083450096 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAA 3176 0.11334914606265181 No Hit ACTACTTCTCCCCCGGACTCCTTGGTAGTCTGTTAGTGGGAGATCCTTGT 3162 0.11284949617446631 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGGATCGGAAGAGCTCGTATGCCGT 2931 0.1046052730194057 Illumina Single End Adapter 2 (95% over 24bp) CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGAC 2915 0.10403424457576511 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGA 2838 0.10128617019074491 No Hit ACTCCTTGGTAGTCTGTTAGTGGGAGATCCTTGTTGCCGTCCCTTCGCCT 2838 0.10128617019074491 No Hit AAGCAGTGGTATCAACGCAGAGATCGGAAGAGCTCGTATGCCGTCTTC 2822 0.10071514174710436 Illumina Single End Adapter 2 (100% over 28bp) CGGCAAGTTTGAATTTCGTGGAGGCTCGGG 2821 0.10067945246937682 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.18497752646181498 0.0 0.0 0.0 0.0 2 1.2719301689316271 0.0 0.0 0.0 0.0 3 1.5319622464544487 0.0 0.0 0.0 0.0 4 1.6507004734539583 0.0 0.0 0.0 0.0 5 2.500569243979754 3.568927772753521E-5 0.0 0.0 0.0 6 2.695611146760734 3.568927772753521E-5 0.0 0.0 0.0 7 2.833907097954933 3.568927772753521E-5 0.0 0.0 0.0 8 2.941189066803904 3.568927772753521E-5 0.0 0.0 0.0 9 3.0132457185357975 3.568927772753521E-5 0.0 0.0 0.0 10 3.09226177942456 3.568927772753521E-5 0.0 0.0 0.0 11 3.265212019292196 3.568927772753521E-5 0.0 0.0 0.0 12 3.321494010268519 3.568927772753521E-5 0.0 0.0 0.0 13 3.367426110703857 3.568927772753521E-5 0.0 0.0 0.0 14 3.4510460884194716 3.568927772753521E-5 0.0 1.0706783318260561E-4 0.0 15 3.653047400357321 3.568927772753521E-5 0.0 1.0706783318260561E-4 0.0 16 3.700585518290398 3.568927772753521E-5 0.0 1.0706783318260561E-4 0.0 17 3.827639347000423 3.568927772753521E-5 0.0 1.0706783318260561E-4 0.0 18 3.890416786523158 3.568927772753521E-5 0.0 1.0706783318260561E-4 0.0 19 4.62768588581858 3.568927772753521E-5 0.0 1.0706783318260561E-4 0.0 20 4.687144222512654 3.568927772753521E-5 0.0 1.0706783318260561E-4 0.0 21 5.04557163873029 3.568927772753521E-5 0.0 1.0706783318260561E-4 0.0 22 5.077085270963703 3.568927772753521E-5 0.0 1.0706783318260561E-4 0.0 23 5.115237108854439 3.568927772753521E-5 0.0 1.0706783318260561E-4 0.0 24 5.142039756427818 3.568927772753521E-5 0.0 1.0706783318260561E-4 0.0 25 5.204388924617821 3.568927772753521E-5 0.0 1.0706783318260561E-4 0.0 26 6.077562793499697 3.568927772753521E-5 0.0 1.0706783318260561E-4 0.0 27 6.1079343688458305 3.568927772753521E-5 0.0 1.0706783318260561E-4 0.0 28 6.133916163031476 3.568927772753521E-5 0.0 1.0706783318260561E-4 0.0 29 6.159933646494849 3.568927772753521E-5 0.0 1.0706783318260561E-4 0.0 30 6.176600539193608 3.568927772753521E-5 0.0 1.0706783318260561E-4 0.0 31 6.190376600396436 3.568927772753521E-5 0.0 1.0706783318260561E-4 0.0 32 6.203189051100622 3.568927772753521E-5 0.0 1.0706783318260561E-4 0.0 33 6.215751676860714 3.568927772753521E-5 0.0 1.0706783318260561E-4 0.0 34 6.2297775630076355 3.568927772753521E-5 0.0 1.0706783318260561E-4 0.0 35 6.243946206265467 3.568927772753521E-5 0.0 1.0706783318260561E-4 0.0 36 6.257615199635113 3.568927772753521E-5 0.0 1.0706783318260561E-4 0.0 37 6.27053471817248 3.568927772753521E-5 0.0 1.0706783318260561E-4 0.0 38 6.2797425518261845 3.568927772753521E-5 0.0 1.0706783318260561E-4 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTGCG 2540 0.0 71.814835 43 CGTGCGC 1425 0.0 70.39925 44 CCAGAAT 1235 0.0 68.90536 44 AATCCCG 705 0.0 68.56534 43 AATCGCA 240 0.0 66.302734 44 CTATACG 100 1.6370905E-11 62.26692 44 TAATCGC 195 0.0 53.78747 43 CTATCAT 490 0.0 53.65403 44 ATAAGAT 960 0.0 49.402622 43 ATGTTCT 585 0.0 48.488953 44 CTAATCG 225 0.0 48.08544 42 TAAGCCA 625 0.0 45.385662 44 TGTGTTA 1005 0.0 44.328106 42 CAATGAA 1055 0.0 44.089542 43 CTCGTGC 3560 0.0 43.620136 42 AGGTCGA 75 1.8774335E-7 42.562256 43 TAATCCA 1915 0.0 41.588776 40 CATAAGA 945 0.0 41.418133 42 TCCAGAA 2340 0.0 41.315014 43 TACGCTA 455 0.0 41.26272 42 >>END_MODULE