##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841196.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1686064 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.1765496446161 38.0 35.0 39.0 31.0 39.0 2 36.85018421602027 39.0 35.0 39.0 32.0 39.0 3 37.1298776321658 39.0 37.0 39.0 33.0 39.0 4 37.443384118277834 39.0 37.0 40.0 33.0 41.0 5 38.017191518234185 39.0 37.0 41.0 33.0 41.0 6 38.059562982188105 40.0 37.0 41.0 33.0 41.0 7 37.994538166997216 40.0 37.0 41.0 33.0 41.0 8 37.920561141214094 39.0 37.0 41.0 33.0 41.0 9 37.80177205610226 39.0 36.0 41.0 33.0 41.0 10 37.62796667267672 39.0 36.0 40.0 33.0 41.0 11 37.49274642006472 39.0 36.0 40.0 32.0 41.0 12 37.35020556752294 39.0 36.0 40.0 32.0 41.0 13 37.21281635809791 39.0 35.0 40.0 32.0 41.0 14 37.150669844086586 38.0 35.0 40.0 32.0 41.0 15 37.078911595289384 38.0 35.0 40.0 31.0 41.0 16 37.00891840404635 38.0 35.0 40.0 31.0 41.0 17 36.94417471697397 38.0 35.0 40.0 31.0 41.0 18 36.8258399443912 38.0 35.0 40.0 31.0 41.0 19 36.74778181611137 38.0 35.0 40.0 31.0 41.0 20 36.594781692747134 38.0 35.0 40.0 31.0 41.0 21 36.35982145398989 38.0 35.0 40.0 30.0 41.0 22 36.33252415092191 38.0 34.0 40.0 30.0 41.0 23 36.27164034105467 38.0 34.0 40.0 30.0 41.0 24 36.22681464048814 38.0 34.0 40.0 30.0 41.0 25 36.204116647326885 38.0 34.0 40.0 30.0 41.0 26 36.17193114605046 37.0 34.0 40.0 30.0 41.0 27 36.15338583733107 37.0 34.0 40.0 31.0 41.0 28 36.101203651186 37.0 34.0 40.0 31.0 41.0 29 36.083262916128454 37.0 34.0 40.0 31.0 41.0 30 36.09670141633924 37.0 34.0 40.0 31.0 41.0 31 35.99229128862634 37.0 34.0 40.0 31.0 41.0 32 35.91901492161607 36.0 34.0 40.0 31.0 41.0 33 35.795944293412845 36.0 34.0 39.0 31.0 41.0 34 35.74631389703707 36.0 34.0 39.0 31.0 41.0 35 35.63848648705156 36.0 34.0 39.0 30.0 41.0 36 35.523804183995544 35.0 34.0 39.0 30.0 41.0 37 35.42869498398294 35.0 34.0 39.0 30.0 41.0 38 35.371585986756706 35.0 34.0 39.0 30.0 41.0 39 35.218574220789876 35.0 34.0 39.0 30.0 40.0 40 35.038473055742905 35.0 33.0 39.0 30.0 40.0 41 34.872991106691174 35.0 33.0 38.0 30.0 40.0 42 34.78740761832537 35.0 33.0 38.0 30.0 40.0 43 34.6678631454983 35.0 33.0 38.0 29.0 40.0 44 34.56724280968442 35.0 33.0 37.0 29.0 40.0 45 34.513336173400056 35.0 33.0 37.0 29.0 40.0 46 34.40620488124744 35.0 33.0 37.0 29.0 40.0 47 34.37728269998242 35.0 33.0 37.0 29.0 40.0 48 34.40296922788066 35.0 33.0 37.0 29.0 40.0 49 34.51542934598059 35.0 33.0 37.0 29.0 40.0 50 34.9211263257701 35.0 33.0 38.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 21 6.0 22 24.0 23 74.0 24 250.0 25 661.0 26 1722.0 27 4301.0 28 9346.0 29 19133.0 30 35066.0 31 59236.0 32 90203.0 33 129811.0 34 178013.0 35 198191.0 36 232772.0 37 251470.0 38 223986.0 39 176068.0 40 75731.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 59.20854724375825 13.834290987767961 26.957161768473792 2 28.783604892815458 17.617540022205564 34.699572495468736 18.899282589510243 3 41.331111986259124 13.85493077368356 19.823268867611194 24.990688372446122 4 22.94029170897427 20.08873921749115 26.571589216067714 30.399379857466858 5 25.185046356484687 21.426648098767306 25.42204803613623 27.966257508611776 6 28.69641959024094 21.302097666517998 22.162207365793943 27.83927537744712 7 32.79851773123678 23.662387667372055 20.466720124502984 23.072374476888186 8 30.753577562892037 19.124422323233283 23.474197895216314 26.647802218658367 9 29.890383757674677 19.866683589709524 24.430863834350298 25.812068818265498 10 33.00699143093026 18.50908387819205 24.86673103749324 23.61719365338445 11 34.06982178612437 17.887755150456922 23.824718397403657 24.21770466601505 12 32.75367957562702 18.383584490268458 24.928769014699323 23.933966919405194 13 28.978733903339375 17.50959631425616 25.854831133337765 27.6568386490667 14 26.77258988982625 21.508614145133283 22.50999962041773 29.208796344622744 15 25.187418745670392 21.955631577449015 25.577024359692157 27.279925317188436 16 27.26379307072567 24.656596665369758 24.469059300240087 23.610550963664487 17 29.646027671547465 23.574372028582545 19.32405887321003 27.455541426659963 18 28.064889589007297 22.43853139619848 22.142753774471196 27.353825240323026 19 29.873183936078345 19.49753983241443 24.51004232342307 26.119233908084155 20 30.10757598762562 19.24405004792226 22.648962316970174 27.99941164748195 21 30.660639216542197 21.703624536197914 21.99157327361239 25.6441629736475 22 31.182742766585374 20.404029740270833 22.48396264910466 25.929264844039135 23 29.688374818512226 20.92524364436937 23.02166465804382 26.364716879074578 24 33.042577268715775 20.748204101386424 21.849111303011036 24.360107326886762 25 28.527602767914857 21.49321470270555 25.1915956126956 24.787586916683992 26 28.672420213666328 21.1046882783369 23.94460538470095 26.278286123295818 27 29.54501953660752 19.97293524574675 24.76894380406093 25.7131014135848 28 30.891253074336504 20.28114722734526 23.97748705979623 24.850112638522006 29 31.48145390744139 20.557729079265577 23.34296218813244 24.617854825160595 30 28.823500369661854 22.312952038952297 23.318944748208093 25.544602843177756 31 29.599824406378133 19.79559489592735 26.328762474936596 24.275818222757916 32 27.960771799836508 20.308056299637546 25.173632079249714 26.557539821276237 33 26.4291743831866 20.671842753104528 26.816450069167836 26.082532794541034 34 27.27667637974354 20.793861145512942 26.143412144993082 25.786050329750438 35 27.72428149166434 20.816944696353946 24.168067051195273 27.290706760786442 36 28.099656006042157 21.638110440859755 24.6513392017889 25.610894351309188 37 25.57586563634126 22.89132018481989 25.03045403287239 26.502360145966463 38 27.169149280317217 22.20372063180135 22.641919726811825 27.985210361069612 39 28.660581916926752 22.014627271777805 24.280809979749147 25.043980831546293 40 27.62172683354327 21.939401348620816 24.428882848010243 26.009988969825677 41 25.72851850795067 23.55463723525895 23.74908050048611 26.96776375630427 42 28.011364197000088 22.08138749769178 23.402253386916936 26.504994918391194 43 25.092111957832874 23.623251373461464 24.94954923023273 26.335087438472925 44 25.040955544848227 23.350203419181177 23.338755429643772 28.270085606326827 45 27.160970714203202 21.549999521750422 25.448910804982333 25.840118959064046 46 25.801910628774937 22.69262699424886 24.4436105830546 27.061851793921605 47 29.620087108807887 20.321075383623803 24.089117258351184 25.969720249217126 48 24.134483511225863 25.044580353764527 22.33602006806903 28.48491606694058 49 26.009026107515794 24.81630053584588 21.949673039611454 27.225000317026883 50 25.662609424268485 23.57004255694472 25.329926572732685 25.43742144605411 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1062.0 1 982.5 2 803.5 3 678.0 4 631.5 5 566.5 6 453.0 7 393.5 8 429.0 9 485.0 10 539.5 11 558.0 12 548.0 13 573.5 14 632.5 15 687.5 16 706.5 17 792.0 18 962.0 19 1137.5 20 1295.0 21 1629.5 22 2077.0 23 2594.0 24 3251.5 25 4118.5 26 5029.5 27 5973.0 28 6973.0 29 7873.0 30 9175.0 31 11958.5 32 15495.0 33 17837.5 34 19949.5 35 23373.5 36 27193.0 37 30242.5 38 33060.0 39 38704.0 40 46184.0 41 55777.0 42 69887.5 43 83730.0 44 89126.0 45 88164.5 46 88747.5 47 90783.5 48 98425.0 49 115396.5 50 135757.0 51 147648.5 52 154409.0 53 158487.5 54 151927.5 55 139432.5 56 130793.5 57 132303.5 58 137899.0 59 132983.0 60 121304.5 61 114617.0 62 111456.0 63 106639.0 64 98672.0 65 91510.0 66 82495.5 67 72754.0 68 65399.5 69 58732.0 70 52721.5 71 47716.5 72 42648.5 73 36294.0 74 29611.0 75 24450.5 76 20823.0 77 16783.0 78 13284.5 79 10301.0 80 7545.0 81 5618.5 82 4203.5 83 3100.0 84 2299.5 85 1702.5 86 1215.0 87 801.0 88 535.5 89 388.0 90 248.0 91 134.5 92 98.5 93 91.0 94 67.5 95 32.5 96 18.5 97 17.0 98 8.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 16793.0 25 15103.0 26 13658.0 27 14956.0 28 13732.0 29 11711.0 30 14632.0 31 12325.0 32 15349.0 33 13152.0 34 14121.0 35 14517.0 36 12930.0 37 13123.0 38 15456.0 39 18500.0 40 19083.0 41 18081.0 42 19458.0 43 19229.0 44 21032.0 45 29299.0 46 101016.0 47 179579.0 48 339510.0 49 346911.0 50 362808.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.64684113707582 #Duplication Level Percentage of deduplicated Percentage of total 1 59.56220390440108 15.871445852146932 2 13.970466807568135 7.445376192641179 3 7.383893574558639 5.90272317163017 4 4.4667488321121365 4.760989861140443 5 3.063577477895224 4.081733118229872 6 2.2109846936406616 3.534945473276938 7 1.6458291162826302 3.069930290025 8 1.2171907675610831 2.5947431213372454 9 0.9788252735795483 2.34743414094261 >10 4.994815122848475 22.59540182677115 >50 0.2824505022512667 5.274151323787506 >100 0.18750057788666136 9.871427081070802 >500 0.020860988467263628 3.818362382616516 >1k 0.013410635443240903 6.786890974634048 >5k 0.0012417255040037872 2.0444451897496467 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 6613 0.3922152421260403 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCG 6522 0.3868180567285702 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAA 6254 0.3709230491843726 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGA 5901 0.3499867146205601 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAA 5604 0.3323717249167291 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCC 4613 0.2735957828409835 No Hit ATCCGAATTCAGTCTTCCTGAGGCTCTGGCTCACCTCCAGGCAGGTCCC 3868 0.22941003425729986 No Hit TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACCTG 3642 0.21600603535808843 No Hit ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGT 3252 0.19287524079750235 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTG 3201 0.18985044458573339 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAAG 3175 0.18830839161502766 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGAC 3031 0.17976779054650358 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTG 2858 0.16950720731834618 No Hit ACCAGCGAGCGGCCTTGAGAGGCTCTGGCTCTTGCTTCTTAGGCGGCCC 2540 0.15064671329202214 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCGC 2516 0.14922327978060143 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAG 2501 0.1483336338359635 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGG 2463 0.14607986410954743 No Hit AGGCCTGGTTTGCGCTGGAGAGTGGTCTTGGTTGTGAGGGTCATAAGAT 2314 0.13724271439281072 No Hit ATGAGCACAGCTCGTATGCCGTCTTCTGCTTGAAAAAAA 2278 0.1351075641256797 Illumina PCR Primer Index 11 (96% over 26bp) CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCCG 2269 0.13457377655889693 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGGTTGTGAGGGTTCCTGCTT 2191 0.1299476176467797 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATG 2164 0.12834625494643145 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAAT 2119 0.12567731711251767 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATC 2113 0.1253214587346625 No Hit CGGCACAGCTGGTTTGAGCAACTGAACTGGAAACAAGATGCAGGACCC 2100 0.12455043224930964 No Hit ATGAGCACAGCTCGTATGCCGTCTTCTGCTTGAAAAAA 1910 0.11328158361722923 Illumina PCR Primer Index 11 (96% over 26bp) CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGG 1902 0.11280710578008901 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA 1867 0.11073126524260052 No Hit AAGCAGTGGTATCAACGCAGAGTGCAG 1769 0.10491891173763272 No Hit ATGAGCACAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAA 1722 0.1021313544444339 Illumina PCR Primer Index 11 (96% over 26bp) AGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCCCTGTGGGTGG 1717 0.10183480579622126 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.1186194592850568 0.0 0.0 0.0 0.0 2 0.3095967887339982 0.0 0.0 0.0 0.0 3 0.40579717021417927 0.0 0.0 0.0 0.0 4 0.5241200808510235 0.0 0.0 0.0 0.0 5 0.6805198379183708 0.0 0.0 0.0 0.0 6 0.8243459323015022 0.0 0.0 0.0 0.0 7 1.0429615957638618 0.0 0.0 0.0 0.0 8 1.134120650224428 0.0 0.0 0.0 0.0 9 1.2157308382125471 0.0 0.0 0.0 0.0 10 1.281386708926826 0.0 0.0 0.0 0.0 11 1.3460936239668244 0.0 0.0 0.0 0.0 12 1.4456746600366297 0.0 0.0 0.0 0.0 13 1.4784729405289478 0.0 0.0 0.0 0.0 14 1.5156601410148132 0.0 0.0 0.0 0.0 15 1.5629299955399083 0.0 0.0 0.0 0.0 16 1.5923476214426024 0.0 0.0 0.0 0.0 17 1.6294755121988251 0.0 0.0 0.0 0.0 18 1.6758557207792824 0.0 0.0 0.0 0.0 19 1.7627444747055865 0.0 0.0 0.0 0.0 20 1.7830284022433311 0.0 0.0 0.0 0.0 21 1.83272995568377 0.0 0.0 0.0 0.0 22 1.846193264312624 0.0 0.0 0.0 0.0 23 1.8629779178014596 0.0 0.0 0.0 0.0 24 1.8747805540003226 0.0 0.0 0.0 0.0 25 1.8920396853262984 0.0 0.0 0.0 0.0 26 1.9820718549236565 0.0 0.0 0.0 0.0 27 1.9945268981485875 0.0 0.0 0.0 0.0 28 2.0088798527220795 0.0 0.0 0.0 0.0 29 2.020208011083802 0.0 0.0 0.0 0.0 30 2.032840983497661 0.0 0.0 0.0 0.0 31 2.043635354292601 0.0 0.0 0.0 0.0 32 2.0544890348171836 0.0 0.0 0.0 0.0 33 2.065639263989979 0.0 0.0 0.0 0.0 34 2.076611563973847 0.0 0.0 0.0 0.0 35 2.0903714212509135 0.0 0.0 0.0 0.0 36 2.100394765560501 0.0 0.0 0.0 0.0 37 2.1087574374400972 0.0 0.0 0.0 0.0 38 2.115459436889703 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATCAT 1305 0.0 120.347786 44 GACCGTA 50 5.260554E-7 92.93128 44 AATGAAG 995 0.0 84.99242 44 CGTGCGC 635 0.0 83.418625 44 CAATGAA 1345 0.0 76.80219 43 TCGTGCG 1225 0.0 72.72122 43 CCAGAAT 755 0.0 72.62179 44 CTATGCG 40 0.0022620617 69.698456 44 CATGACC 560 0.0 68.03896 44 AGGTCCC 890 0.0 62.292427 43 ATAAGAT 855 0.0 57.6377 43 CCTATCA 1425 0.0 56.196754 43 CTATACG 50 0.0054753763 55.758766 44 TACATAT 50 0.0054753763 55.758766 44 TGCACCG 120 2.789966E-8 54.20991 44 TCCAGAA 1810 0.0 52.88253 43 CCCTATC 1315 0.0 52.88015 42 ATGTTCT 545 0.0 52.859993 44 GCAATGA 1625 0.0 52.214394 42 GGTCCCA 535 0.0 52.110992 44 >>END_MODULE