##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841191.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3621797 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.16260464073497 38.0 35.0 39.0 31.0 39.0 2 36.861546077817174 39.0 35.0 39.0 33.0 39.0 3 37.20806467065935 39.0 37.0 39.0 33.0 40.0 4 37.831242060225904 39.0 37.0 40.0 33.0 41.0 5 38.12356379995897 40.0 37.0 41.0 33.0 41.0 6 38.176372944148994 40.0 37.0 41.0 33.0 41.0 7 38.12767584710021 40.0 37.0 41.0 33.0 41.0 8 38.004642170723535 40.0 37.0 41.0 33.0 41.0 9 37.94684517105735 39.0 37.0 41.0 33.0 41.0 10 37.831734081175725 39.0 36.0 41.0 33.0 41.0 11 37.713847573455936 39.0 36.0 40.0 33.0 41.0 12 37.578896608506774 39.0 36.0 40.0 32.0 41.0 13 37.43190907717909 39.0 36.0 40.0 32.0 41.0 14 37.40267165719117 39.0 36.0 40.0 32.0 41.0 15 37.38471841464334 39.0 36.0 40.0 32.0 41.0 16 37.32221601597218 39.0 36.0 40.0 32.0 41.0 17 37.2790559492981 39.0 36.0 40.0 32.0 41.0 18 37.14767448313641 38.0 35.0 40.0 31.0 41.0 19 37.06526815279818 38.0 35.0 40.0 31.0 41.0 20 36.91626145805522 38.0 35.0 40.0 31.0 41.0 21 36.74658684625339 38.0 35.0 40.0 31.0 41.0 22 36.814180364056845 38.0 35.0 40.0 31.0 41.0 23 36.777945588888606 38.0 35.0 40.0 31.0 41.0 24 36.665712352183185 38.0 35.0 40.0 31.0 41.0 25 36.6395460190943 38.0 35.0 40.0 31.0 41.0 26 36.634244303146474 38.0 35.0 40.0 31.0 41.0 27 36.61789772042759 38.0 35.0 40.0 31.0 41.0 28 36.62451920989302 38.0 35.0 40.0 31.0 41.0 29 36.624740436179465 38.0 35.0 40.0 31.0 41.0 30 36.59041667681057 38.0 35.0 40.0 31.0 41.0 31 36.484083976492954 38.0 35.0 40.0 31.0 41.0 32 36.461611892254176 38.0 35.0 40.0 31.0 41.0 33 36.360056378477275 38.0 34.0 40.0 31.0 41.0 34 36.268100673122625 37.0 34.0 40.0 31.0 41.0 35 36.17994745595889 37.0 34.0 40.0 31.0 41.0 36 35.99779669189069 37.0 34.0 40.0 30.0 41.0 37 35.99457469596058 37.0 34.0 40.0 31.0 41.0 38 35.920041287134495 36.0 34.0 40.0 31.0 41.0 39 35.760904789864725 36.0 34.0 39.0 30.0 41.0 40 35.57475352738162 36.0 34.0 39.0 30.0 41.0 41 35.4321693808024 36.0 34.0 39.0 30.0 41.0 42 35.280019239869475 35.0 33.0 39.0 30.0 40.0 43 35.14857313080283 35.0 33.0 39.0 30.0 40.0 44 35.03053097978369 35.0 33.0 39.0 29.0 40.0 45 35.028913041497255 35.0 33.0 38.0 30.0 40.0 46 34.92227914851407 35.0 33.0 38.0 30.0 40.0 47 34.84557363146582 35.0 33.0 38.0 29.0 40.0 48 34.834632623324815 35.0 33.0 38.0 30.0 40.0 49 34.94746521379282 35.0 33.0 38.0 29.0 40.0 50 35.69421603037032 36.0 34.0 39.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 4.0 21 9.0 22 54.0 23 153.0 24 444.0 25 1125.0 26 2859.0 27 6797.0 28 15407.0 29 32728.0 30 62354.0 31 107802.0 32 170125.0 33 248565.0 34 346362.0 35 376966.0 36 458187.0 37 519578.0 38 534950.0 39 492688.0 40 244640.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 48.083534223480775 16.193508360628716 35.72295741589051 2 29.040501165581617 20.263145615284348 28.63285821927623 22.063494999857806 3 30.24288771568368 16.206015963898583 26.237169007539627 27.31392731287811 4 20.97094342946333 16.953849152782443 29.58909624145141 32.48611117630281 5 23.97616431843088 18.939852233573554 27.83938470322881 29.244598744766755 6 27.24396204425593 19.15747900834862 24.35387737081896 29.244681576576493 7 32.50146267170689 19.495598455683737 21.410145295277456 26.592793577331914 8 27.496902780581024 16.661176758388173 28.05104758770301 27.7908728733278 9 28.281789399019324 17.17340866978464 23.734433487023153 30.81036844417288 10 29.310035874456798 19.680368612597558 24.877236355323063 26.13235915762258 11 35.46239615306987 16.35381552306769 23.775490454048086 24.408297869814348 12 32.26069821141273 16.62158315333521 22.387339765315396 28.73037886993666 13 29.429921113745472 17.746273465906565 25.96940137727211 26.854404043075853 14 28.59773753194892 17.98761774886886 21.417434494534067 31.997210224648153 15 26.519846363559306 18.846417952193345 23.340043630275247 31.293692053972105 16 27.831432849494327 20.23407165006763 26.27852969120025 25.65596580923779 17 28.889830103675052 19.76518838576541 18.675370265092162 32.66961124546737 18 29.031582940733564 19.911855910201485 21.168911454728136 29.887649694336815 19 30.751392195642108 16.685170372607853 25.415836392818257 27.14760103893178 20 30.493564382542697 17.63743246791579 24.10797733832128 27.76102581122023 21 32.23242495369011 19.93543536537249 20.66501794551158 27.167121735425816 22 30.80733127781596 19.746192290733024 23.20127273836717 26.245203693083845 23 31.233335275279096 21.611675088360833 20.632630707905495 26.522358928454576 24 32.961814259606484 22.552257898496244 19.8188081772667 24.66711966463057 25 30.966242767153574 21.413267873546634 21.72632066095427 25.89416869834552 26 32.215787175376846 20.96950477632815 21.98862724114011 24.82608080715489 27 30.711509945650494 20.522756463588554 22.925807950340772 25.83992564042018 28 31.968342699646453 20.699856705693605 22.54945596156879 24.782344633091157 29 33.436568862011775 19.848419045875772 23.264314899733176 23.450697192379277 30 30.324448432447976 21.966508885480536 21.656337273805427 26.052705408266064 31 28.758404103576435 19.95769152750446 26.54386847667546 24.74003589224365 32 28.494671235527612 19.290221787991637 24.855541631857424 27.359565344623327 33 27.778242275705274 19.364197881671252 25.308485305979993 27.54907453664348 34 27.158121402130753 17.349681683094637 29.656164929446955 25.836031985327658 35 31.185157685072816 18.284243111347923 23.60288250933348 26.927716694245785 36 28.22666543632589 20.11637720048179 22.359039918650847 29.297917444541472 37 26.902090711896737 20.486167369074074 25.89101832337683 26.720723595652363 38 30.178881916558232 20.32779275399604 22.338365591237483 27.154959738208245 39 28.450972200266477 20.472663218987826 25.484688692667284 25.59167588807841 40 28.61420215195655 19.11564863218799 23.43393138100797 28.83621783484748 41 27.027326116808396 20.320750123413546 23.948258369427187 28.703665390350874 42 27.219355594108812 20.88910771051067 25.91813454999885 25.97340214538167 43 25.652575603261095 23.14044239530233 24.07214664751672 27.134835353919858 44 24.097890837976966 23.53513034616643 24.624540670752996 27.74243814510361 45 27.299160051287263 19.274573486484105 27.001919390978962 26.42434707124967 46 26.349347680877212 20.146738128082085 23.84879679984748 29.655117391193226 47 27.79606080294425 20.230816720386024 24.385224987762463 27.587897488907267 48 25.056499673881454 20.68923283892271 24.942674094328453 29.311593392867387 49 27.742273457118067 20.91603370181261 22.936779092487335 28.40491374858199 50 23.86326194398682 25.544015471671084 24.538714991762767 26.054007592579325 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1669.0 1 1620.5 2 1254.5 3 922.5 4 876.0 5 720.5 6 547.0 7 535.5 8 622.5 9 714.5 10 799.0 11 858.0 12 870.5 13 887.5 14 936.0 15 983.0 16 1053.5 17 1190.0 18 1323.0 19 1570.0 20 1926.0 21 2414.0 22 3050.5 23 3907.0 24 4820.0 25 5668.0 26 7000.5 27 8826.0 28 10746.5 29 12737.5 30 15320.0 31 19117.0 32 24114.0 33 27626.5 34 30870.0 35 35289.0 36 40503.0 37 45970.5 38 51176.5 39 60406.5 40 73528.0 41 90885.0 42 113724.0 43 130186.5 44 141624.0 45 154189.0 46 171655.0 47 186313.0 48 204717.0 49 238308.0 50 270650.5 51 284648.0 52 292266.0 53 312589.0 54 316772.0 55 313702.5 56 322880.0 57 339744.5 58 343637.0 59 315530.0 60 288012.5 61 273458.5 62 262753.5 63 250032.5 64 226029.0 65 204983.5 66 190884.0 67 179114.5 68 163074.5 69 144370.0 70 131078.5 71 119206.5 72 107733.5 73 95978.0 74 81678.0 75 69252.5 76 61131.5 77 49851.0 78 39362.0 79 31335.0 80 24469.5 81 18918.0 82 14303.5 83 10609.0 84 7930.5 85 5939.5 86 4312.0 87 3032.0 88 2204.0 89 1570.5 90 1045.5 91 624.0 92 426.5 93 362.5 94 260.5 95 148.5 96 108.5 97 98.0 98 51.5 99 5.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 34862.0 25 30542.0 26 28670.0 27 27235.0 28 25909.0 29 24231.0 30 34011.0 31 26433.0 32 29047.0 33 28329.0 34 27491.0 35 32231.0 36 26352.0 37 28018.0 38 30204.0 39 35752.0 40 34913.0 41 34386.0 42 38438.0 43 40090.0 44 41734.0 45 67557.0 46 298843.0 47 538985.0 48 707933.0 49 1070381.0 50 279220.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.712143003623925 #Duplication Level Percentage of deduplicated Percentage of total 1 57.166078822603716 11.840319995302053 2 12.77764288219167 5.293047332503824 3 6.870654802258193 4.2691795437872155 4 4.659253581233138 3.860125058585906 5 3.380317301053768 3.5006807668524855 6 2.5568344459762917 3.17745124089915 7 1.9583887496069117 2.839369948698262 8 1.5699739218022128 2.601401950426218 9 1.2919002352092346 2.408222017626215 >10 7.042279938125611 25.291406666137707 >50 0.40049499166760943 5.748920214473248 >100 0.2745754382520473 11.25688095648556 >500 0.027592209981676538 3.930363650336087 >1k 0.02117888549944854 8.379056730520018 >5k 0.0019389120527664153 2.8117494907183356 >10k+ 8.948824858921918E-4 2.791824436647655 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCC 29472 0.8137396988290619 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCG 16294 0.44988716926984035 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATC 13887 0.3834284472597443 No Hit TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACCTG 10381 0.28662567228367575 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGA 10244 0.282843019639146 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGGTTGTGAGGGTTCCTGCTT 10097 0.2787842609621688 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGG 8936 0.2467283505950223 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCCG 8511 0.23499384421600658 No Hit ATTCCTGCTCACCGCAGTGTAGACAGGGAAACTTTCTTTGCAGTTCAGG 8263 0.22814641461131033 No Hit ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGT 7820 0.21591491737388926 No Hit TCGCTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAAT 7762 0.21431350238569416 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTG 7298 0.2015021824801335 No Hit AAAACAGCCGGGGCTCCAGCGGGAGAACGATAATGCAAAGTGCTATGTT 7045 0.19451669985921352 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA 6422 0.17731529403773874 No Hit AAACAGCCGGGGCTCCAGCGGGAGAACGATAATGCAAAGTGCTATGTTC 6389 0.17640414413066222 No Hit ATCCGAATTCAGTCTTCCTGAGGCTCTGGCTCACCTCCAGGCAGGTCCC 5838 0.1611907017428089 No Hit CTCTTTTTAAGTTAGTGCTGGAACGTGGAAGAGCTGCTGCCTCCGAAG 5704 0.15749088090801336 No Hit CAAACAGCCGGGGCTCCAGCGGGAGAACGATAATGCAAAGTGCTATGT 5631 0.1554753068711471 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTG 5401 0.14912486812485626 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTG 4887 0.13493301805705843 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGGTTGTGAGGG 4767 0.13161974566768928 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCC 4282 0.11822860309398898 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGAC 4107 0.11339674752615897 No Hit CTTCCGCCACGGCCGTCTCTGGAGAGCAGCAGCCATGGCCCTACGCTAC 4107 0.11339674752615897 No Hit CTCTTTCCCTTCGGTGTGCCACTGAAGATCCTGGTGTCGCCATGGGCCG 3974 0.10972453729460817 No Hit TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACC 3953 0.10914471462646856 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGGTTGTGAGGGTTCCTGC 3721 0.10273905467368823 No Hit TCGCTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTA 3710 0.10243533803799607 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.12554541295384583 0.0 0.0 0.0 0.0 2 0.2808826668087692 0.0 0.0 0.0 0.0 3 0.38522313647065254 0.0 0.0 0.0 0.0 4 0.46482450562524624 0.0 0.0 0.0 0.0 5 0.5669009058210607 0.0 0.0 0.0 0.0 6 0.683583315133344 0.0 0.0 0.0 1.1044241297897149E-4 7 0.7799443204574966 0.0 0.0 0.0 1.1044241297897149E-4 8 0.8520908267360098 0.0 0.0 0.0 1.1044241297897149E-4 9 0.919819636495364 0.0 0.0 0.0 1.1044241297897149E-4 10 0.9833516345615174 0.0 0.0 0.0 1.1044241297897149E-4 11 1.0396220439743034 0.0 0.0 0.0 1.1044241297897149E-4 12 1.0886584753369668 0.0 0.0 0.0 1.1044241297897149E-4 13 1.1265678335919986 0.0 0.0 0.0 1.1044241297897149E-4 14 1.1653607311508625 0.0 0.0 0.0 1.1044241297897149E-4 15 1.2025246031182864 0.0 0.0 0.0 1.1044241297897149E-4 16 1.23380741659458 0.0 0.0 0.0 1.1044241297897149E-4 17 1.262135895523686 0.0 0.0 0.0 1.1044241297897149E-4 18 1.2931426029675324 0.0 0.0 0.0 1.1044241297897149E-4 19 1.318406304936472 0.0 0.0 0.0 1.1044241297897149E-4 20 1.3383135498759318 0.0 0.0 0.0 1.1044241297897149E-4 21 1.3589386704997546 0.0 0.0 0.0 1.1044241297897149E-4 22 1.37393122806165 0.0 0.0 0.0 1.1044241297897149E-4 23 1.390690864231209 0.0 0.0 0.0 1.1044241297897149E-4 24 1.404440944647091 0.0 0.0 0.0 1.1044241297897149E-4 25 1.419019343160315 0.0 0.0 0.0 1.1044241297897149E-4 26 1.4391750835289774 0.0 0.0 0.0 1.1044241297897149E-4 27 1.452428173086454 0.0 0.0 0.0 1.1044241297897149E-4 28 1.46789011090351 0.0 0.0 0.0 1.1044241297897149E-4 29 1.4813916958901894 0.0 0.0 0.0 1.1044241297897149E-4 30 1.4945067324314423 0.0 0.0 0.0 1.1044241297897149E-4 31 1.5077874325921634 0.0 0.0 0.0 1.1044241297897149E-4 32 1.5209300797366612 0.0 0.0 0.0 1.1044241297897149E-4 33 1.5334100724032849 0.0 0.0 0.0 1.1044241297897149E-4 34 1.5460281180861324 0.0 0.0 0.0 1.1044241297897149E-4 35 1.557983509291106 0.0 0.0 0.0 1.1044241297897149E-4 36 1.5685859809370872 0.0 0.0 0.0 1.1044241297897149E-4 37 1.5764826134650838 0.0 0.0 0.0 1.1044241297897149E-4 38 1.5829987158308432 0.0 0.0 0.0 1.1044241297897149E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATCGCA 100 0.0 265.961 44 CTATCAT 640 0.0 241.02716 44 ATGTTCT 750 0.0 234.04568 44 ACTTCTA 490 0.0 173.68883 44 CCCATAC 290 0.0 128.39497 44 CGTGCGC 1215 0.0 118.204895 44 ACATTGG 400 0.0 99.735374 44 TCGTGCG 2400 0.0 88.20335 43 CGCTACC 400 0.0 86.437325 44 ACGACAC 135 4.402209E-5 78.80326 44 AATCCCG 1460 0.0 65.670586 43 TATGTTC 1740 0.0 65.31861 43 AACGACA 315 0.0 64.97957 43 CAAAACG 215 5.9097056E-6 61.851402 44 TCTTCTA 410 2.910383E-11 58.381683 44 TCGCCCC 415 3.274181E-11 57.67829 44 GTTCAGG 2720 0.0 56.835117 43 CCTATCA 565 0.0 56.248028 43 TAATCCC 5140 0.0 56.05144 42 TGTGTTA 1440 0.0 54.675194 42 >>END_MODULE