##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841190.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6298719 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.160790471840386 38.0 35.0 39.0 31.0 39.0 2 36.873045773275486 38.0 35.0 39.0 33.0 39.0 3 37.1727940236737 39.0 37.0 39.0 33.0 39.0 4 37.54840150830669 39.0 37.0 40.0 33.0 41.0 5 38.178930985808385 40.0 37.0 41.0 33.0 41.0 6 38.24613290416671 40.0 37.0 41.0 33.0 41.0 7 37.61903841082607 39.0 36.0 40.0 32.0 41.0 8 37.89236446331389 39.0 37.0 40.0 33.0 41.0 9 37.941140889123645 39.0 37.0 41.0 33.0 41.0 10 37.26351373985726 39.0 36.0 40.0 32.0 41.0 11 37.553936443267276 39.0 36.0 40.0 32.0 41.0 12 37.56103090168017 39.0 36.0 40.0 32.0 41.0 13 37.56142733149391 39.0 36.0 40.0 32.0 41.0 14 37.58900531997062 39.0 36.0 40.0 33.0 41.0 15 37.594158272499534 39.0 36.0 40.0 32.0 41.0 16 37.40668205709764 39.0 36.0 40.0 32.0 41.0 17 37.1275381549804 38.0 36.0 40.0 31.0 41.0 18 37.17743353847028 38.0 36.0 40.0 31.0 41.0 19 37.17629902207099 38.0 36.0 40.0 31.0 41.0 20 36.95823134831066 38.0 35.0 40.0 31.0 41.0 21 36.812246744139564 38.0 35.0 40.0 31.0 41.0 22 36.704436092481664 38.0 35.0 40.0 30.0 41.0 23 36.08644233851359 38.0 34.0 40.0 30.0 41.0 24 36.39445512651064 38.0 35.0 40.0 30.0 41.0 25 36.50702355138495 38.0 35.0 40.0 30.0 41.0 26 36.73925966008217 38.0 35.0 40.0 31.0 41.0 27 36.739829997701506 38.0 35.0 40.0 31.0 41.0 28 36.372975713046266 38.0 35.0 40.0 30.0 41.0 29 36.52107027661978 38.0 35.0 40.0 30.0 41.0 30 36.67578793087031 38.0 35.0 40.0 31.0 41.0 31 36.628805098633514 38.0 35.0 40.0 30.0 41.0 32 36.66012409263072 38.0 35.0 40.0 31.0 41.0 33 36.622666439301845 38.0 35.0 40.0 31.0 41.0 34 36.580257813846835 38.0 35.0 40.0 31.0 41.0 35 36.48462473549142 38.0 35.0 40.0 31.0 41.0 36 36.415939250118655 38.0 35.0 40.0 31.0 41.0 37 36.40529034676405 38.0 34.0 40.0 31.0 41.0 38 36.35933227975507 38.0 34.0 40.0 31.0 41.0 39 36.188107401955065 37.0 34.0 40.0 31.0 41.0 40 36.053151004416065 37.0 34.0 40.0 30.0 41.0 41 35.91612718475323 37.0 34.0 40.0 30.0 41.0 42 35.73516881520148 37.0 34.0 40.0 30.0 41.0 43 35.62360427477064 36.0 34.0 39.0 30.0 41.0 44 35.51862903893616 36.0 34.0 39.0 30.0 41.0 45 35.483972996779904 36.0 34.0 39.0 30.0 41.0 46 35.40368870293621 36.0 34.0 39.0 30.0 40.0 47 35.34916191048078 36.0 34.0 39.0 30.0 40.0 48 35.368654608699394 36.0 34.0 39.0 30.0 40.0 49 35.41769383105201 36.0 34.0 39.0 30.0 40.0 50 35.75761643898944 37.0 34.0 39.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 1.0 21 31.0 22 81.0 23 241.0 24 556.0 25 1535.0 26 3874.0 27 9947.0 28 24325.0 29 54072.0 30 106067.0 31 185174.0 32 288452.0 33 417116.0 34 573400.0 35 649035.0 36 783355.0 37 890869.0 38 943666.0 39 903162.0 40 463760.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 52.29349015252149 20.75063199358473 26.955877853893785 2 24.684209598808902 35.9360530291953 22.542123247600028 16.83761412439577 3 39.04347852317272 14.549609214191012 20.434885252064745 25.972027010571512 4 17.393314418376182 15.626653610043567 27.014238926994523 39.96579304458574 5 19.923733698867977 30.972885121562022 22.233774835803917 26.86960634376609 6 37.13682099487213 17.26408179186911 20.710385714936642 24.88871149832212 7 27.744831925348628 20.098150115920397 31.538730335485678 20.618287623245298 8 37.837471396961824 15.292061766844972 24.66825397354605 22.20221286264715 9 38.562253689996325 17.75346701448342 20.766841638752258 22.917437656767987 10 26.97989861113029 16.12988291746306 35.58485463472811 21.305363836678538 11 29.489345373241765 28.96328602688896 20.85351005498102 20.693858544888254 12 27.759549203576157 16.437294630860656 33.275067517696854 22.528088647866337 13 24.16051581281845 16.862730342471224 22.040592698293096 36.936161146417234 14 23.187095661832192 31.108087215829123 19.009801834309485 26.6950152880292 15 20.859146121616156 31.651658059360958 21.40705117977163 26.082144639251254 16 23.837593008991192 20.779526757742328 20.897233231074445 34.48564700219203 17 37.6575776757147 18.67798833381835 16.9253144964873 26.739119493979647 18 23.51286031334308 18.741477433744862 20.496850232563162 37.2488120203489 19 23.531372013896796 29.93842081223182 22.82162452397067 23.708582649900716 20 38.04773637306253 16.06453629698356 21.60059847089543 24.287128859058484 21 27.28246807009489 30.295572798215005 19.3995477493122 23.022411382377907 22 35.79661197776881 18.652554590862046 22.6114071766021 22.93942625476704 23 25.701813336965817 20.20633084282693 29.596351258089143 24.495504562118107 24 38.45321564591149 19.058303759859744 19.322468584485193 23.166012009743568 25 26.2956494471595 20.176330296435005 21.44275973320122 32.08526052320427 26 26.507200981790618 29.33926034751892 20.090306274349786 24.063232396340677 27 33.61757089243004 20.141160936094774 21.964941272430398 24.276326899044793 28 27.664926071435165 21.967536184936705 27.35305224818366 23.014485495444468 29 32.2238079044315 20.38842365026738 24.0474247882185 23.34034365708262 30 27.179066581160292 21.38494018148885 22.967702405559386 28.468290831791464 31 27.388942199594567 20.008060151104672 28.293624677032735 24.30937297226802 32 26.951450715202153 19.65230850944398 26.111517770996834 27.284723004357037 33 25.157661002715543 19.946092533815936 28.614926500653677 26.281319962814848 34 25.375681933196038 20.397472282416274 28.4024179780113 25.824427806376388 35 29.317511593354645 19.71693830384344 24.102865697177076 26.862684405624844 36 26.60417655434267 23.467906976744185 23.23578547698149 26.692130991931656 37 24.866766816558993 21.8869973889538 28.45731502499687 24.788920769490336 38 30.087845786536622 21.54641847035246 22.13956506847257 26.22617067463835 39 27.174122629360863 22.488502945737043 25.221020999226173 25.116353425675918 40 26.985571368329346 21.765143545072235 23.72616243229934 27.52312265429908 41 26.34843963243203 24.20508522327372 22.652541292593764 26.793933851700487 42 24.973503515765664 23.646145124299473 26.844259531070474 24.53609182886439 43 24.552626167958643 24.50023622159972 25.35013601674984 25.597001593691793 44 23.167085168515037 23.54332595081604 25.910128264477716 27.37946061619121 45 26.02675901378352 21.827181619233517 27.119732212783386 25.026327154199578 46 24.91900133618474 22.436394208477704 24.749188588390428 27.895415866947133 47 27.83472710568243 20.828465683603003 25.187816575100307 26.14899063561426 48 25.6182957608523 23.47690362092981 23.713804081676574 27.190996536541316 49 26.929556934204523 22.380757057132577 23.56389760865467 27.125788400008226 50 22.744701014723898 25.008436770450498 26.89133901948547 25.35552319534013 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 4091.0 1 4049.5 2 3714.0 3 3355.0 4 3146.0 5 2627.5 6 1993.0 7 1792.0 8 1873.0 9 1935.0 10 2018.0 11 2100.5 12 2128.0 13 2172.5 14 2314.5 15 2575.5 16 2865.0 17 3315.0 18 3881.0 19 4810.0 20 5969.5 21 7471.0 22 9245.0 23 11824.5 24 14890.0 25 17805.5 26 21027.0 27 25938.0 28 32222.0 29 37741.5 30 42598.5 31 49351.5 32 58445.5 33 66064.0 34 74616.0 35 87358.0 36 100029.0 37 109456.0 38 118788.0 39 136926.5 40 160134.5 41 197908.0 42 257236.5 43 309149.0 44 329513.0 45 319802.0 46 319491.5 47 339033.5 48 438325.5 49 559570.0 50 711321.0 51 886108.5 52 941663.0 53 921518.0 54 818679.0 55 623491.0 56 469353.5 57 425137.0 58 418365.0 59 399001.5 60 377271.0 61 368672.0 62 360972.0 63 342303.0 64 304567.0 65 269380.0 66 238920.0 67 213057.0 68 191423.5 69 166112.5 70 145994.0 71 133499.0 72 125880.5 73 113903.0 74 93859.5 75 75765.5 76 64175.5 77 49916.0 78 38662.0 79 32058.0 80 25459.0 81 19102.0 82 14445.0 83 11663.0 84 9402.0 85 7250.0 86 5301.5 87 3542.5 88 2351.5 89 1654.5 90 1131.5 91 736.5 92 524.5 93 410.0 94 255.0 95 114.0 96 75.5 97 71.0 98 40.5 99 10.0 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 112034.0 25 77032.0 26 75264.0 27 132002.0 28 127095.0 29 72793.0 30 89701.0 31 81285.0 32 77723.0 33 59200.0 34 63950.0 35 63140.0 36 54647.0 37 53926.0 38 60882.0 39 65967.0 40 66357.0 41 72619.0 42 73475.0 43 73730.0 44 77713.0 45 106689.0 46 344881.0 47 685173.0 48 1149560.0 49 1300306.0 50 1081575.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.24155888591242 #Duplication Level Percentage of deduplicated Percentage of total 1 57.38280545115082 11.041346301271746 2 12.685015368429237 4.881589403606704 3 7.015237987658199 4.049523445146449 4 4.650396103882112 3.5792348190266146 5 3.3525700122860944 3.2254336655273503 6 2.6136543862306563 3.0174470868048275 7 1.9771360271903873 2.6630225504849943 8 1.5635406617759287 2.4067967771264005 9 1.253949556054541 2.171514980050847 >10 6.885546510790768 22.46673313195948 >50 0.32878464449507233 4.363580627812311 >100 0.2309529239275493 8.862905901134049 >500 0.029112376571275585 3.8453060027872312 >1k 0.02544054458447283 9.90273513521376 >5k 0.00332213296979369 4.187647320026642 >10k+ 0.0025353120032636056 9.335182852020619 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAGCAGTGGTATCAACGCAGAGTGCAG 79670 1.2648603628769595 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGA 36766 0.5837059884716241 No Hit AAGCAGTGGTATCAACGCAGAGTG 26556 0.42160953679629143 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGT 25850 0.41040090850218913 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCG 25402 0.40328835117108736 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGTGCT 23057 0.3660585588911015 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGTGC 21058 0.3343219470498684 No Hit AAGCAGTGGTATCAACGCAGATCGGAAGAGCTCGTATGCCGTCTTCTGCT 19620 0.31149190811655514 Illumina Single End Adapter 2 (100% over 32bp) CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCC 19124 0.3036172910714067 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGTG 18920 0.3003785372867086 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGATCGGAAGAGCTCGTATGCCGTC 18756 0.297774833263716 Illumina Single End Adapter 2 (100% over 25bp) AAGCAGTGGTATCAACGCAGAGTGCAGATCGGAAGAGCTCGTATGCCG 16867 0.26778460826717304 Illumina Single End Adapter 2 (100% over 23bp) CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA 16698 0.2651015230239672 No Hit AAGCAGTGGTATCAACGCAGAGCG 16532 0.2624660665128894 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAA 16143 0.25629020758030324 No Hit AAGCAGTGGTATCAACGCAGAGTGCA 15646 0.2483997142911122 No Hit AAGCAGTGGTATCAACGCAGATCGGAAGAGCTCGTATGCCGTCTTCTG 15471 0.2456213715836506 Illumina Single End Adapter 2 (100% over 30bp) AAGCAGTGGTATCAACGCAGAGTGCAGG 15239 0.24193808296575858 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGTGCTC 14803 0.2350160405631685 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGTGCTCTCCATGGGAAGCAGTGGT 14240 0.22607771516716335 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTG 11836 0.1879112244886619 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTAG 11531 0.18306897005565734 No Hit TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA 11413 0.1811955732586261 No Hit ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGT 11238 0.17841723055116446 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTG 10661 0.1692566377385624 Illumina Single End Adapter 1 (100% over 32bp) AAGCAGTGGTATCAACGCAGAGTGC 10592 0.1681611768996204 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGA 10527 0.1671292210368489 No Hit TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACCTG 10490 0.1665418000072713 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGTGCTCTCCATGGGAAGCAGTG 10238 0.16254098650852658 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCCG 9808 0.15571420157019228 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAA 9059 0.14382289478225652 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATC 9012 0.14307671131225252 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGAGC 8965 0.14233052784224856 No Hit ATTCCTGCTCACCGCAGTGTAGACAGGGAAACTTTCTTTGCAGTTCAGG 7972 0.12656541750790917 No Hit AAGCAGTGGTATCAACGCAGAGATCGGAAGAGCTCGTATGCCGTCTTCTG 7941 0.12607325394258737 Illumina Single End Adapter 2 (100% over 30bp) CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGT 7349 0.11667451746934575 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAG 7247 0.1150551405769967 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGG 7128 0.11316586753592278 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGAC 7049 0.1119116442565544 No Hit ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTG 6937 0.11013350492377894 No Hit AAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTG 6937 0.11013350492377894 Illumina Single End Adapter 2 (100% over 34bp) AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGC 6689 0.10619619640120474 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAA 6656 0.1056722803477977 Illumina Single End Adapter 1 (100% over 32bp) CGGCAAGTTTGAATTTCGTGGAGGCTCGGGTTGTGAGGGTTCCTGCTT 6641 0.10543413668715813 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGTGCTCT 6599 0.10476733443736735 No Hit TCGCTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAAT 6585 0.1045450670207704 No Hit CTGCGCGTCTGCTCCTCCTTCTCGCGCTTCTGCTGCCGCCCTAATCCT 6410 0.10176672431330877 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGGATCGGAAGAGCTCGTATGCCGT 6409 0.10175084806926615 Illumina Single End Adapter 2 (95% over 24bp) AAGCAGTGGTATCAACGCAGAGTGCAGTGCTCTCCA 6347 0.10076652093862261 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.3665507224564233 0.0 0.0 0.0 0.0 2 1.104034010725038 0.0 0.0 0.0 0.0 3 1.2366165247251069 0.0 0.0 0.0 0.0 4 1.3649918340538767 0.0 0.0 0.0 0.0 5 1.9799740232894973 0.0 0.0 0.0 0.0 6 2.1404034693403533 0.0 0.0 0.0 0.0 7 2.2822259573732375 0.0 0.0 0.0 0.0 8 2.403123555757925 0.0 0.0 0.0 0.0 9 2.491363720146906 0.0 0.0 0.0 0.0 10 2.568871543563064 0.0 0.0 0.0 0.0 11 2.726236874513691 0.0 0.0 0.0 0.0 12 2.7925836983678747 0.0 0.0 0.0 0.0 13 2.8615501024890935 1.5876244042637876E-5 0.0 0.0 0.0 14 2.94632924567678 9.525746425582725E-4 0.0 0.0 0.0 15 3.1317002711186195 9.525746425582725E-4 0.0 0.0 0.0 16 3.196745242961307 9.525746425582725E-4 0.0 0.0 0.0 17 3.3219611797255917 9.525746425582725E-4 0.0 0.0 0.0 18 3.3826243082125114 9.525746425582725E-4 0.0 0.0 0.0 19 4.255738349337381 9.525746425582725E-4 0.0 0.0 0.0 20 4.3160204479672775 9.525746425582725E-4 0.0 0.0 0.0 21 4.661487518335077 9.525746425582725E-4 0.0 0.0 0.0 22 4.697256696163141 9.525746425582725E-4 0.0 0.0 0.0 23 4.73547081557377 9.525746425582725E-4 0.0 0.0 0.0 24 4.766508872677127 9.525746425582725E-4 0.0 0.0 0.0 25 4.818424190696553 9.525746425582725E-4 0.0 0.0 0.0 26 5.653054216262069 9.525746425582725E-4 0.0 0.0 0.0 27 5.68947432009588 9.525746425582725E-4 0.0 0.0 0.0 28 5.724529066942024 9.525746425582725E-4 0.0 0.0 0.0 29 5.754725683111121 9.525746425582725E-4 0.0 0.0 0.0 30 5.784557145667238 9.525746425582725E-4 0.0 0.0 0.0 31 5.8008779245430695 9.525746425582725E-4 0.0 0.0 0.0 32 5.8219933291197785 9.525746425582725E-4 0.0 0.0 0.0 33 5.836393082466451 9.525746425582725E-4 0.0 0.0 0.0 34 5.850872217033336 9.525746425582725E-4 0.0 0.0 0.0 35 5.8693362888549245 9.525746425582725E-4 0.0 0.0 0.0 36 5.885593562754585 9.525746425582725E-4 0.0 0.0 0.0 37 5.905756392688736 9.525746425582725E-4 0.0 0.0 0.0 38 5.9143613169598455 9.525746425582725E-4 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAGCCA 2005 0.0 134.61237 44 ATTAGTC 485 0.0 85.79226 44 AATCGCA 175 0.0 83.539795 44 ACTTCTA 915 0.0 79.88778 44 TTAAGCC 1670 0.0 78.17014 43 TCGTGCG 4290 0.0 77.73881 43 CTATACG 260 0.0 73.52985 44 CTATCAT 830 0.0 73.16507 44 CGTGCGC 1710 0.0 67.079865 44 AATCCCG 1560 0.0 67.01109 43 ATGTTCT 1305 0.0 62.907215 44 CGCTACC 635 0.0 61.984406 44 TGTGTTA 3770 0.0 59.374653 42 GTGTTAG 2560 0.0 57.96562 43 ATTAAGC 2130 0.0 56.338753 42 CAATGAA 2395 0.0 55.78446 43 AACGACA 430 0.0 55.737415 43 ACGCTAC 1375 0.0 53.033558 43 TAATCCT 3225 0.0 52.776054 42 CCAGAAT 1625 0.0 51.903423 44 >>END_MODULE