##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841189.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4106236 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.02886828716128 38.0 35.0 39.0 31.0 39.0 2 36.79374687670168 38.0 35.0 39.0 32.0 39.0 3 37.12353966016566 39.0 36.0 39.0 33.0 40.0 4 37.74784571563836 39.0 37.0 40.0 33.0 41.0 5 38.049984219124276 39.0 37.0 41.0 33.0 41.0 6 38.08173689968136 40.0 37.0 41.0 33.0 41.0 7 38.038930787222164 40.0 37.0 41.0 33.0 41.0 8 37.921176230494304 39.0 37.0 41.0 33.0 41.0 9 37.859569688639425 39.0 37.0 41.0 33.0 41.0 10 37.73515574847622 39.0 36.0 40.0 33.0 41.0 11 37.64294721491897 39.0 36.0 40.0 33.0 41.0 12 37.49302646024242 39.0 36.0 40.0 32.0 41.0 13 37.37573948501742 39.0 36.0 40.0 32.0 41.0 14 37.324000617597235 39.0 36.0 40.0 32.0 41.0 15 37.26719944981243 39.0 36.0 40.0 32.0 41.0 16 37.24144593734992 39.0 36.0 40.0 32.0 41.0 17 37.167341331574704 38.0 35.0 40.0 31.0 41.0 18 37.06233616382497 38.0 35.0 40.0 31.0 41.0 19 36.959666224737205 38.0 35.0 40.0 31.0 41.0 20 36.85395530115658 38.0 35.0 40.0 31.0 41.0 21 36.676151833455265 38.0 35.0 40.0 31.0 41.0 22 36.71165271552828 38.0 35.0 40.0 31.0 41.0 23 36.732809804404816 38.0 35.0 40.0 31.0 41.0 24 36.65679274157647 38.0 35.0 40.0 31.0 41.0 25 36.61074964340222 38.0 35.0 40.0 31.0 41.0 26 36.590373079635015 38.0 35.0 40.0 31.0 41.0 27 36.60087677930835 38.0 35.0 40.0 31.0 41.0 28 36.596165191219605 38.0 35.0 40.0 31.0 41.0 29 36.59456335977666 38.0 35.0 40.0 31.0 41.0 30 36.581724820604805 38.0 35.0 40.0 31.0 41.0 31 36.47425127117252 38.0 35.0 40.0 31.0 41.0 32 36.410976402157544 38.0 34.0 40.0 31.0 41.0 33 36.27140602317417 38.0 34.0 40.0 31.0 41.0 34 36.23180311113858 37.0 34.0 40.0 31.0 41.0 35 36.140589389714656 37.0 34.0 40.0 31.0 41.0 36 36.00847394226707 37.0 34.0 40.0 30.0 41.0 37 35.94838568610641 37.0 34.0 40.0 30.0 41.0 38 35.87603647412366 37.0 34.0 40.0 30.0 41.0 39 35.72023868309063 36.0 34.0 39.0 30.0 41.0 40 35.56973571082518 36.0 34.0 39.0 30.0 41.0 41 35.408432293640544 36.0 34.0 39.0 30.0 41.0 42 35.27504745053087 35.0 33.0 39.0 30.0 41.0 43 35.14185323408827 35.0 33.0 39.0 29.0 40.0 44 35.06584747815617 35.0 33.0 39.0 29.0 40.0 45 35.045828866137455 35.0 33.0 39.0 30.0 40.0 46 34.94569261332852 35.0 33.0 38.0 30.0 40.0 47 34.91151532011177 35.0 33.0 38.0 29.0 40.0 48 34.90334456901058 35.0 33.0 38.0 30.0 40.0 49 35.03966941298095 35.0 33.0 39.0 29.0 40.0 50 35.87584902440412 37.0 34.0 39.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 3.0 21 23.0 22 61.0 23 207.0 24 526.0 25 1390.0 26 3399.0 27 7989.0 28 18047.0 29 38580.0 30 73843.0 31 126915.0 32 198282.0 33 287102.0 34 394946.0 35 431600.0 36 522164.0 37 588791.0 38 598346.0 39 545795.0 40 268226.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 47.33868194619111 16.517462707939824 36.14385534586906 2 27.85911477080226 19.63615827244221 30.001490416040383 22.503236540715147 3 28.749126937662616 15.945746907873781 26.841418759175067 28.463707395288534 4 21.38459650151623 17.382732020273554 32.0985934563917 29.13407802181852 5 23.46246051128089 18.993428531628478 29.353427323709596 28.19068363338103 6 26.16963564685517 19.093276665052862 26.08086822092057 28.656219467171397 7 30.821852421536416 19.05382447574859 22.852948539733227 27.271374562981766 8 28.239877103995 16.960861479953905 26.658891500634645 28.140369915416453 9 27.603430489626025 18.60190208258853 24.55784324135291 29.236824186432536 10 28.83811354242669 18.863138894111298 25.55566703910832 26.74308052435369 11 32.53181258943714 16.56970032896307 24.03247158711774 26.866015494482053 12 29.874196222525935 17.281593167075638 23.99991135434008 28.84429925605835 13 27.91481054669045 17.896828141392753 24.782379775541397 29.405981536375403 14 28.65285872511955 18.639138130394844 22.296502198120127 30.41150094636548 15 26.315998398533353 19.733473672726067 24.18280391092962 29.76772401781096 16 28.236029297877668 20.768947522743456 24.749137653072058 26.245885526306818 17 28.311037163962325 19.769857358417784 20.552496252042015 31.36660922557788 18 29.07765164983211 19.131365074973772 21.45000920551084 30.34097406968328 19 28.79530061107058 17.266250649012868 25.05382057923607 28.884628160680485 20 29.489927028061707 17.670416410552146 23.924927841458697 28.914728719927446 21 31.086279502688107 20.18464111658463 21.674326560869858 27.05475281985741 22 29.623114696768525 19.455725389383367 24.156770336629457 26.76438957721865 23 29.7632430284085 21.051907391586845 22.588984169443744 26.595865410560915 24 32.8108272393501 20.8059643917203 21.89211725775138 24.491091111178218 25 30.415497575921947 20.770477416867415 23.155311886895866 25.658713120314776 26 30.38207082097169 20.91572152530607 22.756433635173202 25.945774018549034 27 30.2758304773251 20.978982664807667 23.64409554958071 25.10109130828652 28 31.591583608400654 20.69573977114029 22.191305611121102 25.521371009337955 29 31.59029516689999 19.86340156138644 23.96338803980834 24.58291523190523 30 30.47612659467732 20.864015508285753 23.80520327359595 24.85465462344097 31 28.65362673144471 20.4446601183315 26.399414990329596 24.502298159894192 32 29.303729257619132 19.225600384120582 25.14181408250764 26.32885627575265 33 27.58136036107372 19.82563940137778 26.342544936257816 26.250455301290682 34 27.35472223347181 18.643704718929648 29.178381039873987 24.823192007724558 35 28.964496810475858 19.735185650250287 24.13500358399206 27.165313955281796 36 28.445856299632982 21.277677559273933 22.8775493714799 27.39891676961318 37 26.27932216314244 22.015661194743636 26.35953174088021 25.345484901233718 38 29.728691246121546 21.382549948287267 22.19416800202412 26.69459080356707 39 28.322967355587082 21.343299411035893 24.565487466556533 25.768245766820492 40 27.93516903180022 20.72425059877039 23.075718012696434 28.264862356732955 41 26.171655863491793 21.639131721938142 24.14374231807296 28.045470096497098 42 27.503899414497333 21.780442478934123 25.315620023672047 25.400038082896494 43 25.104921074869623 23.68303871065792 24.18350203692063 27.028538177551827 44 24.389236263512235 22.98809532375395 24.79514291127916 27.82752550145466 45 26.86414410555279 19.810406325184278 26.266990049054982 27.05845952020795 46 25.97971016297883 21.044665043313632 23.660235531502806 29.31538926220473 47 27.129246960284352 20.884454310963356 24.83846023546521 27.14783849328708 48 24.667199125066197 22.07564761834118 25.162281934997527 28.0948713215951 49 27.438632516901507 21.688098725784798 22.636088589704247 28.237180167609445 50 24.133625348427103 25.833096308094888 24.711018829284942 25.322259514193075 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2510.0 1 2476.0 2 2134.5 3 1783.5 4 1696.0 5 1427.5 6 1065.0 7 1011.5 8 1170.0 9 1309.5 10 1405.5 11 1452.5 12 1457.0 13 1442.5 14 1478.0 15 1573.5 16 1656.5 17 1777.0 18 2029.5 19 2535.0 20 3106.5 21 3943.0 22 4949.0 23 6202.0 24 7672.0 25 8953.0 26 10530.5 27 12514.5 28 14981.0 29 18065.0 30 21686.5 31 26461.5 32 32736.5 33 37861.5 34 42926.5 35 49470.5 36 56245.0 37 62672.0 38 69989.0 39 83049.0 40 100119.5 41 122151.0 42 152299.0 43 174501.5 44 185442.0 45 192288.0 46 205055.5 47 218612.0 48 239602.5 49 276632.5 50 309187.5 51 323680.5 52 349731.0 53 386045.5 54 382517.5 55 365690.0 56 355835.5 57 353996.5 58 348442.0 59 322300.0 60 300869.5 61 288431.0 62 275767.5 63 261702.0 64 244719.0 65 230250.0 66 213358.0 67 196579.5 68 175819.0 69 153237.0 70 137318.5 71 122799.0 72 109749.0 73 98257.5 74 86272.0 75 74884.5 76 65889.0 77 53284.0 78 42492.5 79 34914.0 80 27087.0 81 20311.5 82 15327.5 83 11390.5 84 8335.5 85 6156.5 86 4631.0 87 3370.5 88 2345.5 89 1608.0 90 1070.0 91 644.5 92 431.0 93 343.5 94 230.0 95 121.0 96 97.0 97 95.0 98 50.5 99 5.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 39329.0 25 36293.0 26 33485.0 27 32342.0 28 30335.0 29 28411.0 30 40122.0 31 33789.0 32 43430.0 33 35476.0 34 38093.0 35 39274.0 36 35394.0 37 35935.0 38 40304.0 39 47016.0 40 44772.0 41 43075.0 42 47295.0 43 46570.0 44 48572.0 45 75464.0 46 306912.0 47 585744.0 48 764357.0 49 1202867.0 50 351580.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.557498025154356 #Duplication Level Percentage of deduplicated Percentage of total 1 57.38333923549227 11.796578830103947 2 12.807253290179727 5.265701684410427 3 6.828874311337361 4.211537105080353 4 4.565577702579102 3.754274184178345 5 3.211915498058187 3.301447325414692 6 2.427332698868413 2.9939932298027996 7 1.988070131520293 2.860882346181775 8 1.5020264297884522 2.47023242912846 9 1.2420538919556117 2.298016838791149 >10 7.322185385033807 26.288651757538915 >50 0.3997861097218061 5.665003383107673 >100 0.2647039934184618 10.636833567452959 >500 0.03257867867789978 4.6771346186431675 >1k 0.021806696211779 9.072466961501382 >5k 0.0017077533177899218 2.646834964127626 >10k+ 7.881938389799638E-4 2.0604107745363414 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCC 19422 0.4729879139922791 No Hit ACTACTTCTCCCCCGGACTCCTTGGTAGTCTGTTAGTGGGAGATCCTTG 13114 0.3193679077383765 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGA 11318 0.2756295546578424 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTG 11223 0.2733160003467896 Illumina Single End Adapter 1 (100% over 32bp) AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCG 11011 0.26815312125265084 No Hit TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACCTG 10208 0.24859749902343656 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGG 9788 0.23836915364825595 No Hit ATTCCTGCTCACCGCAGTGTAGACAGGGAAACTTTCTTTGCAGTTCAGG 9419 0.2293828216400616 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA 9217 0.22446347457866522 No Hit TCGCTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAAT 9193 0.2238789977000835 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGGTTGTGAGGGTTCCTGCTT 9179 0.22353805285424416 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATC 8952 0.21800987571099179 No Hit ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGT 8443 0.20561409524440388 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTG 6228 0.15167174999196345 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAA 5963 0.14521815112428998 Illumina Single End Adapter 1 (100% over 32bp) CTCTTTCCCTTCGGTGTGCCACTGAAGATCCTGGTGTCGCCATGGGCCG 5583 0.135963933880079 No Hit AAACAGCCGGGGCTCCAGCGGGAGAACGATAATGCAAAGTGCTATGTTC 5512 0.13423485644760796 No Hit ACTACTTCTCCCCCGGACTCCTTGGTAGTCTGTTAGTGGGAGATCCT 5369 0.13075234837939173 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGAC 5165 0.12578429491144688 No Hit CTTCCGCCACGGCCGTCTCTGGAGAGCAGCAGCCATGGCCCTACGCTAC 4939 0.12028047097146877 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTG 4831 0.1176503250178509 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGGTTGTGAGGG 4688 0.11416781694963465 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAA 4632 0.11280403756627724 Illumina Single End Adapter 1 (100% over 32bp) CTTTCCGCGCCGATAGCGCTCACGCAAGCATGGTTAACGTCCCTAAAAC 4614 0.11236567990734092 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCCG 4591 0.11180555623203342 No Hit AGCGAGCGGCCTTGAGAGGCTCTGGCTCTTGCTTCTTAGGCGGCCCGAG 4534 0.11041742364540177 No Hit CTCTTTTTAAGTTAGTGCTGGAACGTGGAAGAGCTGCTGCCTCCGAAG 4375 0.10654526432479769 No Hit CAAACAGCCGGGGCTCCAGCGGGAGAACGATAATGCAAAGTGCTATGT 4372 0.10647220471497497 No Hit TCGCTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTA 4257 0.10367158633843743 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAA 4181 0.10182074288959524 Illumina Single End Adapter 1 (100% over 32bp) >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.3321776926606264 0.0 0.0 0.0 0.0 2 0.6208362110701869 0.0 0.0 0.0 0.0 3 0.7817621783063613 0.0 0.0 0.0 0.0 4 0.9014094659926999 0.0 0.0 0.0 0.0 5 1.0476748048577822 0.0 0.0 0.0 0.0 6 1.1758457136901046 0.0 0.0 0.0 0.0 7 1.276887154074924 0.0 0.0 0.0 0.0 8 1.3521385521923242 0.0 0.0 0.0 0.0 9 1.412826734751729 0.0 0.0 0.0 0.0 10 1.466647313987798 0.0 0.0 0.0 0.0 11 1.5107996715239942 0.0 0.0 0.0 0.0 12 1.5467206463534975 4.870640654847895E-5 0.0 0.0 0.0 13 1.5742154128501138 4.870640654847895E-5 0.0 0.0 0.0 14 1.6029765459169907 4.870640654847895E-5 0.0 0.0 0.0 15 1.635561131897923 4.870640654847895E-5 0.0 0.0 0.0 16 1.6556281713958965 4.870640654847895E-5 0.0 0.0 0.0 17 1.6792264253686344 4.870640654847895E-5 0.0 0.0 0.0 18 1.6989525200207685 4.870640654847895E-5 0.0 0.0 0.0 19 1.7330957110112521 4.870640654847895E-5 0.0 0.0 0.0 20 1.747415394536505 4.870640654847895E-5 0.0 0.0 0.0 21 1.7717685978107445 4.870640654847895E-5 0.0 0.0 0.0 22 1.783506841788928 4.870640654847895E-5 0.0 0.0 0.0 23 1.7958539158489673 4.870640654847895E-5 0.0 0.0 0.0 24 1.8090289988203307 4.870640654847895E-5 0.0 0.0 0.0 25 1.8213273664738219 4.870640654847895E-5 0.0 0.0 0.0 26 1.8528891179172362 4.870640654847895E-5 0.0 0.0 0.0 27 1.8649196003347104 4.870640654847895E-5 0.0 0.0 0.0 28 1.8779729172897028 4.870640654847895E-5 0.0 0.0 0.0 29 1.8906365829923073 4.870640654847895E-5 0.0 0.0 0.0 30 1.9022287077508453 9.74128130969579E-5 0.0 0.0 0.0 31 1.9143566029814165 9.74128130969579E-5 0.0 0.0 0.0 32 1.9263627321956167 9.74128130969579E-5 0.0 0.0 0.0 33 1.9379548569541547 1.2176601637119737E-4 0.0 0.0 0.0 34 1.9475743722474792 1.2176601637119737E-4 0.0 0.0 0.0 35 1.960164978340261 1.2176601637119737E-4 0.0 0.0 0.0 36 1.9708316813743778 1.2176601637119737E-4 0.0 0.0 0.0 37 1.9797206005694754 1.2176601637119737E-4 0.0 0.0 0.0 38 1.9859063142011322 1.2176601637119737E-4 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATCGCA 105 0.0 239.77652 44 CCCATAC 325 0.0 147.89014 44 CTATCAT 760 0.0 120.46188 44 ATGTTCT 750 0.0 109.861244 44 ACATTGG 385 0.0 89.17309 44 GACCGTA 110 3.358924E-5 83.22822 44 TCGTGCG 1820 0.0 80.97071 43 ACTTCTA 660 0.0 79.760376 44 TCACGTC 180 5.6304998E-8 76.292534 44 ATCCTTG 2015 0.0 72.616135 43 GATACCC 175 4.2496795E-6 65.39359 44 TAATTCC 310 6.0936145E-10 59.06518 44 CTAAAAC 930 0.0 59.000614 43 CATGACC 555 0.0 57.73489 44 CCCGAGG 1190 0.0 57.700233 44 AATCCCG 1120 0.0 57.390144 43 CCAGAAT 655 0.0 55.909035 44 TGTGTTA 1675 0.0 55.816345 42 CACATGC 1480 0.0 55.67293 44 TACGCTG 165 2.5002196E-4 55.48548 44 >>END_MODULE