ERR841185.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR841185.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	41827
Sequences flagged as poor quality	0
Sequence length	24-50
%GC	52

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC	278	0.6646424558299663	No Hit
CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA	101	0.2414708202835489	No Hit
CGGCAAGTTTGAATTTCGTGGAGGCTCGGG	98	0.23429841968106727	No Hit
AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCG	92	0.21995361847610395	No Hit
ATTCCTGCTCACCGCAGTGTAGACAGGGAAACTTTCTTTGCAGTTCAGG	90	0.21517201807444952	No Hit
ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGT	75	0.17931001506204125	No Hit
ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT	71	0.1697468142587324	No Hit
ATTCCTGCTCACCGCAGTGTAGACAGGGAAACTTTCTTTGCAGTTCAGGA	63	0.15062041265211465	No Hit
TCGGAAGAGCTCGTATGCCGTCTTCTGCTTG	62	0.14822961245128746	Illumina Single End Adapter 1 (100% over 31bp)
AAGAAGGAGATGATCAAGAAGGTGAAAAGAAGAGAAAAGGTGGGAGGAAC	54	0.1291032108446697	No Hit
CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA	51	0.12193081024218805	No Hit
CCTTTCGTTGCCTGATCGCCGCCATCATGGGTCGCATGCATGCTCCCGG	49	0.11714920984053363	No Hit
TTGAGTTCCAGCCAGGAGGACCAGGGGCTGGG	47	0.1123676094388792	No Hit
CTGCCAGCGGCGTGAGCTTCGGCCGCCATTTTACAACAGCTCCACTCGC	46	0.10997680923805198	No Hit
ATCTACCTGAGGAAAGGCACTTGCTGCTGAGGCAGG	45	0.10758600903722476	No Hit
ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTG	43	0.10280440863557033	Illumina Single End Adapter 1 (100% over 32bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GAACTGT	10	0.009043619	133.12083	44
CGTGTGC	10	0.009043619	133.12083	44
TTCAGGA	30	2.3474155E-5	88.74722	44
GTTCAGG	40	1.886292E-9	75.55506	43
TCGTGCG	30	2.319177E-6	71.95721	43
TGAACAC	20	0.002981621	64.76148	43
TGTGTTA	25	4.468022E-6	64.543434	42
TGTGCCC	15	0.003033906	64.543434	42
ACCTTAG	45	7.403287E-10	57.37194	42
AGTTCAG	45	7.403287E-10	57.37194	42
CAGTTCA	45	3.274181E-11	57.35907	41
CCGGAAC	15	0.004848096	57.359066	41
CTGTGTT	25	9.025756E-6	57.359066	41
TGGACGC	15	0.004848096	57.359066	41
AACCTTA	40	7.4760464E-10	57.359062	41
CTATACC	15	0.0054623997	55.66028	40
GTGGACG	15	0.0054623997	55.66028	40
ACGCACC	20	2.4236192E-4	55.660275	40
ACAACCT	45	5.2750693E-11	54.613678	39
CCTATAC	15	0.005889614	54.613674	39