##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841185.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 41827 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.984842326726756 35.0 31.0 37.0 23.0 39.0 2 34.05400817653668 35.0 32.0 37.0 27.0 39.0 3 34.40887465034547 35.0 33.0 37.0 29.0 39.0 4 34.581920768881346 35.0 33.0 38.0 29.0 39.0 5 34.92985392210773 35.0 33.0 38.0 29.0 40.0 6 34.739761398139954 35.0 33.0 38.0 28.0 40.0 7 34.605661414875556 35.0 33.0 38.0 28.0 40.0 8 34.389293996700694 35.0 32.0 38.0 27.0 40.0 9 34.361943242403235 35.0 32.0 38.0 27.0 40.0 10 34.14708202835489 35.0 32.0 38.0 27.0 40.0 11 34.023979726014296 35.0 32.0 38.0 26.0 40.0 12 34.037463839146966 35.0 32.0 38.0 27.0 40.0 13 33.84486097496832 35.0 32.0 38.0 26.0 40.0 14 33.78638200205609 35.0 31.0 38.0 26.0 40.0 15 33.442489301169104 35.0 31.0 38.0 26.0 40.0 16 33.476343032012814 35.0 31.0 38.0 26.0 40.0 17 33.39792478542568 35.0 31.0 38.0 26.0 40.0 18 33.22786716714084 34.0 31.0 37.0 25.0 40.0 19 33.12623425060368 34.0 31.0 37.0 25.0 40.0 20 33.00829607669687 34.0 31.0 37.0 24.0 40.0 21 32.8173428646568 34.0 30.0 37.0 24.0 40.0 22 32.859540488201404 34.0 30.0 37.0 24.0 40.0 23 33.079111578645374 34.0 31.0 37.0 25.0 40.0 24 33.15408707294331 34.0 31.0 37.0 26.0 40.0 25 33.32326911793468 34.0 31.0 37.0 26.0 40.0 26 33.27941360105891 34.0 31.0 37.0 26.0 40.0 27 33.34035891561665 34.0 31.0 37.0 26.0 40.0 28 33.33398229629053 34.0 31.0 37.0 26.0 40.0 29 33.45963717024479 34.0 31.0 37.0 26.0 40.0 30 33.51312860399624 34.0 32.0 36.0 26.0 40.0 31 33.483737837542364 34.0 32.0 36.0 27.0 40.0 32 33.51667501809476 34.0 32.0 36.0 27.0 40.0 33 33.46678187947984 34.0 32.0 36.0 27.0 39.0 34 33.44042197498126 34.0 32.0 36.0 27.0 39.0 35 33.458796675640876 34.0 32.0 36.0 27.0 39.0 36 33.406534276710865 34.0 32.0 36.0 27.0 39.0 37 33.38608931804466 34.0 32.0 35.0 27.0 39.0 38 33.35118554645563 34.0 32.0 35.0 27.0 39.0 39 33.27189871842727 34.0 32.0 35.0 27.0 39.0 40 33.173121378131036 34.0 32.0 35.0 27.0 39.0 41 33.053703404873325 34.0 31.0 35.0 27.0 39.0 42 33.02952949668614 34.0 31.0 35.0 27.0 38.0 43 33.00343803197703 34.0 31.0 35.0 27.0 38.0 44 32.92844498910675 34.0 31.0 35.0 27.0 38.0 45 32.90479663783821 34.0 31.0 35.0 27.0 37.0 46 32.87418954827281 34.0 31.0 35.0 27.0 37.0 47 32.84648100891305 34.0 31.0 35.0 27.0 37.0 48 32.747297971400066 34.0 31.0 35.0 27.0 37.0 49 32.757250208739215 34.0 31.0 35.0 27.0 37.0 50 32.63452894229887 34.0 31.0 35.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 2.0 21 4.0 22 8.0 23 47.0 24 111.0 25 280.0 26 570.0 27 1194.0 28 1847.0 29 2650.0 30 3317.0 31 4019.0 32 4621.0 33 5306.0 34 6450.0 35 2905.0 36 2634.0 37 2412.0 38 1879.0 39 1252.0 40 319.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 45.970306261505726 14.935328854567622 39.09436488392665 2 21.985798646807087 23.284003155856265 32.701365146914675 22.028833050421976 3 26.253377005283667 20.47959452028594 25.02450570205848 28.242522772371913 4 19.29375762067564 21.54350060965405 32.39773352140961 26.765008248260692 5 21.30442058957133 26.796088650871447 24.845195686996437 27.054295072560784 6 27.245559088626965 23.33181915987281 23.044923135773544 26.377698615726686 7 31.264494226217515 20.527410524302482 21.220742582542375 26.987352666937625 8 24.49135725727401 20.57522652831903 26.107538193033207 28.825878021373754 9 27.192961484208766 22.134028259258372 24.885839290410498 25.787170966122364 10 27.783489133813088 20.613479331532265 25.354436129772633 26.248595404882014 11 27.898247543452793 19.616515647787313 24.86193128840223 27.623305520357665 12 28.30707437779425 19.583044444975734 22.330073875726207 29.779807301503812 13 25.261194921940373 22.13880985966003 24.696966074545152 27.903029143854447 14 25.67958495708514 23.049704736175197 23.248141152843857 28.02256915389581 15 25.88041217395462 24.959954096636146 22.762808712075934 26.396825017333303 16 25.715446960097545 25.120137710091566 23.9725536136945 25.19186171611638 17 26.57135343199369 22.758027111674277 19.44915963372941 31.221459822602625 18 25.851722571544695 22.60023429841968 22.605015898821335 28.943027231214284 19 26.874985057498748 20.96970856145552 23.472876371721615 28.682430009324122 20 26.372917015325033 20.766490544385206 23.664140387787793 29.19645205250197 21 28.854567623783677 23.037750735171063 21.37136299519449 26.736318645850766 22 27.48942070911134 21.651086618691277 22.70303870705525 28.15645396514213 23 29.85631290793028 23.786071198029983 21.737155425921056 24.62046046811868 24 29.160590049489564 23.616324383771246 21.349845793387047 25.87323977335214 25 28.004596127518088 24.273909642088793 21.667807549383923 26.053686681009193 26 30.061686771059666 22.988936340251243 22.646787043280636 24.302589845408455 27 29.487081583301517 24.039709812905688 20.669466717576686 25.803741886216113 28 28.34410611842276 23.728681566856164 21.797367806245617 26.129844508475458 29 30.39953523990599 21.305025218516466 23.330428582745782 24.965010958831762 30 28.593268070269545 25.27557999195387 23.274775378838676 22.85637655893791 31 25.554826719142888 23.964141248496777 24.833278670602382 25.647753361757953 32 26.810867991759924 22.36234062691387 26.167808028506208 24.658983352819998 33 26.328016545315464 20.973453834603507 25.5517466073604 27.146783012720626 34 26.601141407736208 21.536865164005302 26.534847524067562 25.327145904190928 35 27.668851691443287 21.60248156385345 23.6070467049046 27.121620039798668 36 25.38795409953029 22.171353826030085 24.787442773054284 27.653249301385337 37 24.453832226916113 24.354254677127336 24.87024743512372 26.32166566083283 38 27.85190638323978 24.085150762246556 21.90116867580749 26.161774178706175 39 26.25357720542491 23.254945875326612 24.558292895358967 25.93318402388951 40 27.30612115646474 23.385794357009402 22.467462554229076 26.84062193229678 41 24.124576407939323 25.0895594642569 24.09230272712603 26.693561400677744 42 24.890084651223834 25.283811273705624 24.030448192138593 25.79565588293195 43 26.39607463533496 23.69571748055676 22.514102606896092 27.394105277212187 44 23.141339869281047 24.897875816993466 23.376225490196077 28.58455882352941 45 25.483658087596815 21.656073078392556 27.04664652148241 25.813622312528224 46 24.453498671390612 24.559787422497788 24.226749335695306 26.7599645704163 47 25.396649284367022 22.90765191020378 23.565960279596137 28.129738525833055 48 24.709012304622547 23.432823412038577 24.18523445294313 27.67292983039574 49 25.132201502922346 23.534650709713333 21.84803785137768 29.485109935986642 50 24.814237225942573 24.814237225942573 22.41078800110082 27.960737547014038 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 365.0 1 331.0 2 184.0 3 72.0 4 69.5 5 49.5 6 26.0 7 22.5 8 27.0 9 29.5 10 28.5 11 27.0 12 24.5 13 20.5 14 27.5 15 36.0 16 39.0 17 42.0 18 47.0 19 53.0 20 64.5 21 80.0 22 85.0 23 113.0 24 157.0 25 170.0 26 161.0 27 149.0 28 164.0 29 234.5 30 304.5 31 385.5 32 502.5 33 615.5 34 716.5 35 821.5 36 948.5 37 1028.0 38 1070.0 39 1173.0 40 1288.0 41 1470.5 42 1765.0 43 1945.0 44 1982.5 45 2102.5 46 2359.0 47 2650.5 48 3021.5 49 3432.0 50 3771.0 51 3823.5 52 3723.5 53 3826.0 54 3820.0 55 3654.5 56 3489.5 57 3289.5 58 3114.0 59 2962.5 60 2852.0 61 2798.0 62 2843.0 63 2751.0 64 2537.0 65 2402.0 66 2176.0 67 1919.5 68 1718.0 69 1492.0 70 1253.5 71 1082.5 72 981.0 73 854.5 74 714.5 75 625.5 76 564.5 77 436.5 78 292.5 79 230.0 80 184.0 81 140.0 82 113.5 83 85.0 84 64.5 85 63.0 86 53.5 87 36.0 88 25.0 89 18.0 90 8.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 923.0 25 863.0 26 756.0 27 762.0 28 654.0 29 584.0 30 697.0 31 666.0 32 625.0 33 603.0 34 522.0 35 534.0 36 498.0 37 539.0 38 453.0 39 569.0 40 594.0 41 507.0 42 519.0 43 583.0 44 585.0 45 566.0 46 1186.0 47 2983.0 48 6091.0 49 7064.0 50 10901.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.50759079063763 #Duplication Level Percentage of deduplicated Percentage of total 1 68.76855719390066 32.67028474430392 2 13.20517336822505 12.546919453941236 3 5.903074832670726 8.413225906710977 4 3.401942529314076 6.464723743036795 5 2.2142821196718834 5.259760441819878 6 1.4644456746011776 4.1743371506443205 7 1.0316541693925823 3.4307982881870562 8 0.8555180916914096 3.251488273125015 9 0.6693170952644557 2.8617878403901784 >10 2.4306778722761813 18.45219594998446 >50 0.045292134266015804 1.5683649317426545 >100 0.01006491872578129 0.9061132761135152 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 278 0.6646424558299663 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA 101 0.2414708202835489 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGG 98 0.23429841968106727 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCG 92 0.21995361847610395 No Hit ATTCCTGCTCACCGCAGTGTAGACAGGGAAACTTTCTTTGCAGTTCAGG 90 0.21517201807444952 No Hit ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGT 75 0.17931001506204125 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 71 0.1697468142587324 No Hit ATTCCTGCTCACCGCAGTGTAGACAGGGAAACTTTCTTTGCAGTTCAGGA 63 0.15062041265211465 No Hit TCGGAAGAGCTCGTATGCCGTCTTCTGCTTG 62 0.14822961245128746 Illumina Single End Adapter 1 (100% over 31bp) AAGAAGGAGATGATCAAGAAGGTGAAAAGAAGAGAAAAGGTGGGAGGAAC 54 0.1291032108446697 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA 51 0.12193081024218805 No Hit CCTTTCGTTGCCTGATCGCCGCCATCATGGGTCGCATGCATGCTCCCGG 49 0.11714920984053363 No Hit TTGAGTTCCAGCCAGGAGGACCAGGGGCTGGG 47 0.1123676094388792 No Hit CTGCCAGCGGCGTGAGCTTCGGCCGCCATTTTACAACAGCTCCACTCGC 46 0.10997680923805198 No Hit ATCTACCTGAGGAAAGGCACTTGCTGCTGAGGCAGG 45 0.10758600903722476 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTG 43 0.10280440863557033 Illumina Single End Adapter 1 (100% over 32bp) >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.07889640662729816 0.0 0.0 0.0 0.0 2 0.24625242068520334 0.0 0.0 0.0 0.0 3 0.38730963253400913 0.0 0.0 0.0 0.0 4 0.5307576445836422 0.0 0.0 0.0 0.0 5 0.7435388624572644 0.0 0.0 0.0 0.0 6 0.9085040763143424 0.0 0.0 0.0 0.0 7 1.016090085351567 0.0 0.0 0.0 0.0 8 1.0997680923805198 0.0 0.0 0.0 0.0 9 1.1714920984053363 0.0 0.0 0.0 0.0 10 1.2288713032251894 0.0 0.0 0.0 0.0 11 1.2934229086475244 0.0 0.0 0.0 0.0 12 1.346020513065723 0.0 0.0 0.0 0.0 13 1.3699285150739953 0.0 0.0 0.0 0.0 14 1.4344801204963302 0.0 0.0 0.0 0.0 15 1.4751237239103927 0.0 0.0 0.0 0.0 16 1.5181581275252827 0.0 0.0 0.0 0.0 17 1.5683649317426542 0.0 0.0 0.0 0.0 18 1.630525736964162 0.0 0.0 0.0 0.0 19 1.7333301455997323 0.0 0.0 0.0 0.0 20 1.773973749013795 0.0 0.0 0.0 0.0 21 1.807444951825376 0.0 0.0 0.0 0.0 22 1.8265713534319936 0.0 0.0 0.0 0.0 23 1.840916154636957 0.0 0.0 0.0 0.0 24 1.8528701556410931 0.0 0.0 0.0 0.0 25 1.895904559255983 0.0 0.0 0.0 0.0 26 1.9150309608626006 0.0 0.0 0.0 0.0 27 1.9269849618667367 0.0 0.0 0.0 0.0 28 1.9341573624692185 0.0 0.0 0.0 0.0 29 1.9461113634733544 0.0 0.0 0.0 0.0 30 1.9700193654816267 0.0 0.0 0.0 0.0 31 1.972410165682454 0.0 0.0 0.0 0.0 32 1.9795825662849356 0.0 0.0 0.0 0.0 33 1.98436416668659 0.0 0.0 0.0 0.0 34 1.9915365672890717 0.0 0.0 0.0 0.0 35 2.0082721686948624 0.0 0.0 0.0 0.0 36 2.015444569297344 0.0 0.0 0.0 0.0 37 2.029789370502307 0.0 0.0 0.0 0.0 38 2.0369617711047887 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GAACTGT 10 0.009043619 133.12083 44 CGTGTGC 10 0.009043619 133.12083 44 TTCAGGA 30 2.3474155E-5 88.74722 44 GTTCAGG 40 1.886292E-9 75.55506 43 TCGTGCG 30 2.319177E-6 71.95721 43 TGAACAC 20 0.002981621 64.76148 43 TGTGTTA 25 4.468022E-6 64.543434 42 TGTGCCC 15 0.003033906 64.543434 42 ACCTTAG 45 7.403287E-10 57.37194 42 AGTTCAG 45 7.403287E-10 57.37194 42 CAGTTCA 45 3.274181E-11 57.35907 41 CCGGAAC 15 0.004848096 57.359066 41 CTGTGTT 25 9.025756E-6 57.359066 41 TGGACGC 15 0.004848096 57.359066 41 AACCTTA 40 7.4760464E-10 57.359062 41 CTATACC 15 0.0054623997 55.66028 40 GTGGACG 15 0.0054623997 55.66028 40 ACGCACC 20 2.4236192E-4 55.660275 40 ACAACCT 45 5.2750693E-11 54.613678 39 CCTATAC 15 0.005889614 54.613674 39 >>END_MODULE