##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841181.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 11933255 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.13514200442377 38.0 35.0 39.0 31.0 39.0 2 36.86564621304078 38.0 35.0 39.0 33.0 39.0 3 37.17502014328865 39.0 37.0 39.0 33.0 40.0 4 37.75831598335911 39.0 37.0 40.0 33.0 41.0 5 38.16722788543444 40.0 37.0 41.0 33.0 41.0 6 38.20509048034254 40.0 37.0 41.0 33.0 41.0 7 38.147025518184265 40.0 37.0 41.0 33.0 41.0 8 38.04701047618609 40.0 37.0 41.0 33.0 41.0 9 38.00459195751704 39.0 37.0 41.0 33.0 41.0 10 37.8617642043181 39.0 37.0 41.0 33.0 41.0 11 37.774218350315984 39.0 36.0 40.0 33.0 41.0 12 37.67226410564427 39.0 36.0 40.0 33.0 41.0 13 37.51484259743046 39.0 36.0 40.0 32.0 41.0 14 37.457194872647904 39.0 36.0 40.0 32.0 41.0 15 37.42148617456009 39.0 36.0 40.0 32.0 41.0 16 37.38231480011112 39.0 36.0 40.0 32.0 41.0 17 37.328633637678905 39.0 36.0 40.0 32.0 41.0 18 37.19015616443292 38.0 35.0 40.0 31.0 41.0 19 37.11431248221881 38.0 35.0 40.0 31.0 41.0 20 37.001296377224826 38.0 35.0 40.0 31.0 41.0 21 36.82099494228524 38.0 35.0 40.0 31.0 41.0 22 36.87575208943411 38.0 35.0 40.0 31.0 41.0 23 36.82225662654489 38.0 35.0 40.0 31.0 41.0 24 36.76184486127213 38.0 35.0 40.0 31.0 41.0 25 36.73566998261613 38.0 35.0 40.0 31.0 41.0 26 36.71756956488425 38.0 35.0 40.0 31.0 41.0 27 36.721105780091335 38.0 35.0 40.0 31.0 41.0 28 36.72664025852437 38.0 35.0 40.0 31.0 41.0 29 36.70838892068916 38.0 35.0 40.0 31.0 41.0 30 36.703623215250346 38.0 35.0 40.0 31.0 41.0 31 36.631490382951476 38.0 35.0 40.0 31.0 41.0 32 36.558447166413096 38.0 35.0 40.0 31.0 41.0 33 36.48090075211535 38.0 35.0 40.0 31.0 41.0 34 36.41628770794981 38.0 35.0 40.0 31.0 41.0 35 36.30857865655214 37.0 34.0 40.0 31.0 41.0 36 36.16640512333185 37.0 34.0 40.0 31.0 41.0 37 36.110864524572015 37.0 34.0 40.0 31.0 41.0 38 36.02133946705516 37.0 34.0 40.0 31.0 41.0 39 35.875812658929334 36.0 34.0 40.0 30.0 41.0 40 35.728587501290285 36.0 34.0 39.0 30.0 41.0 41 35.53994581846189 36.0 34.0 39.0 30.0 41.0 42 35.393974131468504 35.0 34.0 39.0 30.0 41.0 43 35.26712947422451 35.0 33.0 39.0 30.0 40.0 44 35.14827673208856 35.0 33.0 39.0 30.0 40.0 45 35.12009421335486 35.0 33.0 39.0 30.0 40.0 46 35.00028626535842 35.0 33.0 38.0 30.0 40.0 47 34.97054204372219 35.0 33.0 38.0 30.0 40.0 48 34.973872246490416 35.0 33.0 38.0 30.0 40.0 49 35.04735349335147 35.0 33.0 39.0 30.0 40.0 50 35.673216539265034 36.0 34.0 39.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 9.0 21 28.0 22 152.0 23 441.0 24 1253.0 25 3233.0 26 7938.0 27 19696.0 28 45871.0 29 99385.0 30 193668.0 31 339403.0 32 537625.0 33 791099.0 34 1105309.0 35 1233421.0 36 1514230.0 37 1741489.0 38 1812259.0 39 1660340.0 40 826403.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 45.87481789335768 18.923512486743977 35.20166961989834 2 27.380366882296574 20.735893098739613 30.05497661786327 21.828763401100538 3 28.299763978897623 17.08944458154963 26.345854504910854 28.264936934641888 4 19.557823913089933 17.122218539702704 32.288566698692016 31.031390848515343 5 23.19026954506545 18.55533129896244 29.82275162979422 28.431647526177894 6 26.330887926219624 17.34209987132597 26.70138197834539 29.625630224109013 7 31.304878677276232 17.428404907127184 22.618371936240365 28.64834447935622 8 27.124091457024928 17.18075244348671 27.013367266516973 28.68178883297139 9 28.196221399777343 16.793180066964126 25.110969303848783 29.899629229409747 10 29.042243713052308 18.33112591660867 26.126316750961916 26.50031361937711 11 32.970392403413825 16.9029824637117 24.50050719606679 25.626117936807685 12 31.542383029609272 16.355797307608025 23.217412181336943 28.884407481445756 13 28.000591623995298 17.024751419457644 26.62847647184276 28.3461804847043 14 28.139329964875472 18.002866778594775 21.687628396443383 32.17017486008637 15 25.631137522830105 19.982385359233504 23.416393934429458 30.97008318350693 16 28.452974481815733 19.44482037801086 25.666157305781194 26.436047834392205 17 29.592881405785764 19.48722289098825 18.72250278737863 32.19739291584735 18 27.13866417838218 19.195098068381174 21.837026025170836 31.829211728065815 19 28.703761044241492 17.749222655511847 26.18504339344127 27.36197290680539 20 29.655999138541834 17.417200922966952 25.00900215406442 27.917797784426796 21 29.96019107946658 20.717180685403942 22.05311124249 27.269516992639474 22 30.276600977687984 19.607039319950843 24.288243232881555 25.828116469479617 23 29.522121164761835 21.067914831284508 22.920200733161238 26.489763270792423 24 32.41576585768091 20.851695534872924 20.369714717401077 26.36282389004509 25 29.768408526959206 21.20492560936577 23.31403051954687 25.71263534412816 26 30.73147801946419 20.987300271387394 22.564787490001944 25.71643421914647 27 29.886484089896744 21.007617793467077 23.21772760689247 25.888170509743713 28 29.97195804251597 20.07318867651604 24.125319174989237 25.82953410597876 29 32.791080971253045 19.602934557959266 24.39736256821886 23.20862190256883 30 28.937809260472765 21.164259399674897 22.95123309975908 26.94669824009326 31 28.08518761013979 20.491250314811893 27.446636389113355 23.976925685934958 32 27.935159761716072 19.14048924048272 25.730556592522973 27.193794405278236 33 26.729708777349515 19.276597238066653 26.776901496228415 27.216792488355416 34 26.226471568069186 18.22699797667377 30.298635021033153 25.24789543422389 35 29.053411850946137 18.436872406005957 24.55989272678939 27.949823016258517 36 28.122701125683374 19.207951608207004 24.337167832177535 28.33217943393208 37 25.10873962755733 20.63364160381228 27.45553654862036 26.802082220010032 38 30.269247422848185 20.83297783546433 22.418161254962193 26.479613486725295 39 27.993355247646072 21.075144024551477 24.697500725713386 26.23400000208907 40 28.460506528555307 20.07720222424063 22.500549690273992 28.961741556930072 41 27.187209441344883 20.91090492903836 23.092138964523496 28.809746665093268 42 26.865988083961177 21.58579336227393 25.914963348535508 25.633255205229382 43 25.23496509644233 23.413072117349536 24.59123897037556 26.76072381583257 44 23.786585580378457 23.222104390219386 25.017596059608472 27.973713969793685 45 26.23848860880541 20.086266471825397 27.279621981037717 26.395622938331474 46 25.052036426434693 21.392416755760518 24.443701735629364 29.111845082175424 47 28.094705249211565 20.42444231464426 24.23969006115591 27.241162374988264 48 24.540400459159333 22.45950982197933 24.705709557406514 28.294380161454818 49 27.648751778619427 21.010079468482935 22.15851165815477 29.18265709474287 50 24.35957696089844 26.147822709139596 23.283152925259035 26.209447404702928 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 5663.0 1 5431.5 2 5073.5 3 4840.0 4 4502.5 5 3649.0 6 2671.5 7 2442.5 8 2686.5 9 2886.0 10 2962.5 11 2927.0 12 2868.5 13 2978.0 14 3269.0 15 3613.5 16 3941.0 17 4545.0 18 5391.0 19 6534.5 20 7833.5 21 9671.5 22 11949.0 23 15388.5 24 19310.0 25 22912.0 26 27867.0 27 34243.0 28 41306.0 29 49081.0 30 57843.5 31 70477.5 32 87482.5 33 101911.5 34 118018.0 35 139214.5 36 158874.0 37 176555.0 38 196330.0 39 229370.0 40 270407.0 41 336807.0 42 443365.0 43 538921.0 44 576161.0 45 553700.0 46 561155.5 47 605003.5 48 682980.5 49 802333.5 50 901167.5 51 967314.5 52 1037356.0 53 1089896.5 54 1055768.0 55 1002590.0 56 986165.0 57 1006636.5 58 1027637.5 59 983841.5 60 929569.5 61 892607.0 62 837992.5 63 781341.0 64 738287.0 65 705396.0 66 639694.5 67 571416.0 68 503946.0 69 431515.0 70 377874.0 71 337650.5 72 312305.5 73 282536.0 74 237177.0 75 195540.0 76 167440.5 77 132695.5 78 105277.0 79 87901.5 80 69343.0 81 51395.0 82 37971.0 83 28560.0 84 21350.5 85 16100.0 86 11938.5 87 8263.0 88 5559.0 89 3898.5 90 2588.0 91 1574.0 92 1078.5 93 875.5 94 564.0 95 236.0 96 157.5 97 143.0 98 86.5 99 30.0 100 30.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 110799.0 25 102678.0 26 95152.0 27 93334.0 28 88342.0 29 78541.0 30 95775.0 31 90205.0 32 94092.0 33 89076.0 34 90022.0 35 96960.0 36 85877.0 37 91771.0 38 99614.0 39 106965.0 40 110945.0 41 111059.0 42 123849.0 43 129949.0 44 133081.0 45 201711.0 46 794686.0 47 1663086.0 48 2222787.0 49 3339382.0 50 1593517.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.175631624194637 #Duplication Level Percentage of deduplicated Percentage of total 1 55.34167866379804 9.505282861939472 2 12.883091549127352 4.425504692571728 3 7.006112514894982 3.6100322302048813 4 4.777953793825023 3.282574971206473 5 3.472481764202462 2.9821033801837498 6 2.6462332122071754 2.7270436106747833 7 2.0160932503559033 2.4239372491696742 8 1.6684055022791504 2.292473464554089 9 1.4079421648923753 2.1764066375126285 >10 7.910466152254878 23.945122838994454 >50 0.48171649155650775 5.712157414174141 >100 0.3189722710756602 10.90437077783907 >500 0.03440220908781615 4.053152667564612 >1k 0.02881407022018659 10.093803647114862 >5k 0.0033186222805847623 4.024512879294256 >10k+ 0.002317767941995707 7.841520677001139 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCC 54145 0.4537320286878978 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA 39889 0.33426755734290436 No Hit TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACCTG 35778 0.29981761053459427 No Hit ATTCCTGCTCACCGCAGTGTAGACAGGGAAACTTTCTTTGCAGTTCAGG 35588 0.29822542131212315 No Hit TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA 35164 0.2946723253630296 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCG 34151 0.28618344282427555 No Hit ATCCGAATTCAGTCTTCCTGAGGCTCTGGCTCACCTCCAGGCAGGTCCC 28830 0.24159376465180707 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATC 25452 0.21328631626492522 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGA 25186 0.2110572513534656 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTAG 25162 0.21085613271483766 No Hit ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGT 24807 0.20788125285179943 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAA 24270 0.2033812233124994 No Hit ACTACTTCTCCCCCGGACTCCTTGGTAGTCTGTTAGTGGGAGATCCTTG 22931 0.19216047926571586 No Hit TCGCTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAAT 22525 0.18875822229559328 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCCG 21252 0.17809055450503655 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAA 18341 0.15369653962812327 No Hit CTGCGCGTCTGCTCCTCCTTCTCACGTTTCTCCTGCCGCCCTAATCCT 18002 0.15085573885750367 No Hit TCGCTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATC 17197 0.14410988452019166 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGT 17015 0.14258473484392986 No Hit CTCTTTCCCTTCGGTGTGCCACTGAAGATCCTGGTGTCGCCATGGGCCG 16348 0.13699531267872847 No Hit AAAACAGCCGGGGCTCCAGCGGGAGAACGATAATGCAAAGTGCTATGTT 16339 0.136919893189243 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTG 15709 0.1316405289252597 No Hit CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC 15600 0.13072711510815782 No Hit CTGCGCGTCTGCTCCTCCTTCTCGCGCTTCTGCTGCCGCCCTAATCCT 15054 0.1261516660793723 No Hit AAACAGCCGGGGCTCCAGCGGGAGAACGATAATGCAAAGTGCTATGTTC 15016 0.12583322823487808 No Hit TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGC 15004 0.12573266891556412 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGAC 14691 0.1231097466701248 No Hit ATTCCTGCTCACCGCAGTGTAGACAGGGAAACTTTCTTTGCAGTTCA 14086 0.11803988098804559 No Hit AGCGAGCGGCCTTGAGAGGCTCTGGCTCTTGCTTCTTAGGCGGCCCGAG 13978 0.11713484711421988 No Hit AGGCCTGGTTTGCGCTGGAGAGTGGTCTTGGTTGTGAGGGTCATAAGAT 13902 0.11649797142523143 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTG 13860 0.11614601380763254 No Hit TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACC 13602 0.11398398844238222 No Hit TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACCTGC 13536 0.1134309121861554 No Hit ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTG 13293 0.11139458597004756 No Hit ATCCGAATTCAGTCTTCCTGAGGCTCTGGCTCACCTCCAGGCAGGTC 13253 0.111059388239001 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGGTTGTGAGGGTTCCTGCTT 12970 0.10868786429184663 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGG 12855 0.10772417081508776 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAAC 12621 0.1057632640884654 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCC 12167 0.10195876984108694 No Hit CTTTCCGCGCCGATAGCGCTCACGCAAGCATGGTTAACGTCCCTAAAAC 12086 0.10127999443571767 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.12760139626614866 0.0 0.0 0.0 0.0 2 0.3549743971783055 0.0 0.0 0.0 0.0 3 0.47560368063868574 0.0 0.0 0.0 0.0 4 0.5691322275439518 0.0 0.0 0.0 0.0 5 0.7009319753914586 0.0 0.0 0.0 0.0 6 0.8028823652892694 0.0 0.0 0.0 0.0 7 0.896905328847829 0.0 0.0 0.0 0.0 8 0.9730371135117787 0.0 0.0 0.0 0.0 9 1.0316631966718217 0.0 0.0 0.0 0.0 10 1.0855127121644514 0.0 0.0 0.0 0.0 11 1.1371750624620023 0.0 0.0 0.0 0.0 12 1.1772144314355135 0.0 0.0 0.0 0.0 13 1.2089660365088988 0.0 0.0 0.0 0.0 14 1.2416897150023192 4.189971638081982E-5 0.0 0.0 0.0 15 1.2807905303289002 4.189971638081982E-5 0.0 0.0 0.0 16 1.3048661073613192 4.189971638081982E-5 0.0 0.0 0.0 17 1.3307601320846658 4.189971638081982E-5 0.0 0.0 0.0 18 1.3550452076989892 4.189971638081982E-5 0.0 0.0 0.0 19 1.422453471412452 4.189971638081982E-5 0.0 0.0 0.0 20 1.4409396262796696 4.189971638081982E-5 0.0 0.0 0.0 21 1.4778867961842765 4.189971638081982E-5 0.0 0.0 0.0 22 1.4912695655963104 4.189971638081982E-5 0.0 0.0 0.0 23 1.5050713321721525 4.189971638081982E-5 0.0 0.0 0.0 24 1.5187725394286806 4.189971638081982E-5 0.0 0.0 0.0 25 1.5351301887037527 4.189971638081982E-5 0.0 0.0 0.0 26 1.5885942268056787 4.189971638081982E-5 0.0 0.0 0.0 27 1.600828943988878 4.189971638081982E-5 0.0 0.0 0.0 28 1.614924008579386 4.189971638081982E-5 0.0 0.0 0.0 29 1.6279883401469255 4.189971638081982E-5 0.0 0.0 0.0 30 1.6401560177839156 4.189971638081982E-5 0.0 0.0 0.0 31 1.6519382180302022 4.189971638081982E-5 0.0 0.0 0.0 32 1.6640639959508114 4.189971638081982E-5 0.0 0.0 0.0 33 1.6758294363105457 4.189971638081982E-5 0.0 0.0 0.0 34 1.686941241094739 4.189971638081982E-5 0.0 0.0 0.0 35 1.6997793141938222 4.189971638081982E-5 0.0 0.0 0.0 36 1.7106900003393877 4.189971638081982E-5 0.0 0.0 0.0 37 1.7197235791910925 4.189971638081982E-5 0.0 0.0 0.0 38 1.7262599349465004 4.189971638081982E-5 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTAGTC 2610 0.0 189.61816 44 TAAGCCA 5960 0.0 187.7808 44 ATGTTCT 2580 0.0 112.528404 44 CTATACG 260 0.0 109.92711 44 AATCGCA 345 0.0 104.64457 44 CTATCAT 1830 0.0 91.24234 44 TTAAGCC 4545 0.0 82.480385 43 ACATTGG 1125 0.0 81.56463 44 ACTTCTA 1805 0.0 77.505104 44 TATTAGT 2280 0.0 75.21706 43 CGTGCGC 3125 0.0 66.909744 44 AATCCCG 3710 0.0 63.93379 43 ATCCTTG 4635 0.0 63.264748 43 AGGTCCC 6110 0.0 62.856297 43 TCGTGCG 7070 0.0 61.42754 43 ATTAAGC 6025 0.0 59.642315 42 CCTTAAC 2290 0.0 58.22325 43 TGTGTTA 8205 0.0 57.85428 42 TTCAGGA 3865 0.0 56.82349 44 CGCTACC 1260 0.0 56.1115 44 >>END_MODULE