##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841178.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4954425 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.08505406782825 38.0 35.0 39.0 31.0 39.0 2 36.847320728439726 38.0 35.0 39.0 32.0 39.0 3 37.198518899771415 39.0 37.0 39.0 33.0 40.0 4 37.727274305292745 39.0 37.0 40.0 33.0 41.0 5 38.061638434328906 39.0 37.0 41.0 33.0 41.0 6 38.118163863616864 40.0 37.0 41.0 33.0 41.0 7 38.092329584159614 40.0 37.0 41.0 33.0 41.0 8 37.94024412520121 39.0 37.0 41.0 33.0 41.0 9 37.851128233851554 39.0 37.0 40.0 33.0 41.0 10 37.711658567845916 39.0 36.0 40.0 33.0 41.0 11 37.58604600937546 39.0 36.0 40.0 32.0 41.0 12 37.535833522558114 39.0 36.0 40.0 32.0 41.0 13 37.37888978034787 39.0 36.0 40.0 32.0 41.0 14 37.36172754658714 39.0 36.0 40.0 32.0 41.0 15 37.348334872361576 39.0 36.0 40.0 32.0 41.0 16 37.30560176004279 39.0 36.0 40.0 32.0 41.0 17 37.25723247400052 39.0 36.0 40.0 32.0 41.0 18 37.099996265964265 38.0 35.0 40.0 31.0 41.0 19 37.0439003517058 38.0 35.0 40.0 31.0 41.0 20 36.940109296235185 38.0 35.0 40.0 31.0 41.0 21 36.7467140990125 38.0 35.0 40.0 31.0 41.0 22 36.814968840985586 38.0 35.0 40.0 31.0 41.0 23 36.78868708275935 38.0 35.0 40.0 31.0 41.0 24 36.72433531640907 38.0 35.0 40.0 31.0 41.0 25 36.709482517516705 38.0 35.0 40.0 31.0 41.0 26 36.69121395364894 38.0 35.0 40.0 31.0 41.0 27 36.68727861869042 38.0 35.0 40.0 31.0 41.0 28 36.732712644114784 38.0 35.0 40.0 31.0 41.0 29 36.741648477180036 38.0 35.0 40.0 31.0 41.0 30 36.71919911369044 38.0 35.0 40.0 31.0 41.0 31 36.666652729742204 38.0 35.0 40.0 31.0 41.0 32 36.58121495896142 38.0 35.0 40.0 31.0 41.0 33 36.50044364300303 38.0 35.0 40.0 31.0 41.0 34 36.412603571211136 38.0 34.0 40.0 31.0 41.0 35 36.28682273357371 37.0 34.0 40.0 31.0 41.0 36 36.12450375104922 37.0 34.0 40.0 31.0 41.0 37 36.11390749235663 37.0 34.0 40.0 31.0 41.0 38 36.04996273031721 37.0 34.0 40.0 31.0 41.0 39 35.884822294775475 37.0 34.0 40.0 30.0 41.0 40 35.707938476545486 36.0 34.0 39.0 30.0 41.0 41 35.5100375563704 36.0 34.0 39.0 30.0 41.0 42 35.39949970854384 36.0 34.0 39.0 30.0 41.0 43 35.233590498186814 35.0 33.0 39.0 30.0 40.0 44 35.121849635576794 35.0 33.0 39.0 30.0 40.0 45 35.08206257645359 35.0 33.0 39.0 30.0 40.0 46 34.97869952060555 35.0 33.0 38.0 30.0 40.0 47 34.89437149172145 35.0 33.0 38.0 29.0 40.0 48 34.89845113570752 35.0 33.0 38.0 29.0 40.0 49 35.111309684930745 35.0 33.0 39.0 30.0 40.0 50 36.04740555637219 37.0 34.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 7.0 21 20.0 22 75.0 23 238.0 24 616.0 25 1450.0 26 3683.0 27 8756.0 28 19586.0 29 42139.0 30 82876.0 31 144515.0 32 229240.0 33 337435.0 34 466125.0 35 516432.0 36 627261.0 37 710762.0 38 744737.0 39 683194.0 40 335278.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 49.53733278836596 15.246027541036547 35.216639670597495 2 28.910075336693964 19.497055662362435 28.80580491177079 22.78706408917281 3 31.06142488785278 15.931697422001545 23.75173708351625 29.255140606629425 4 22.532503771880695 18.05101500174087 29.41719775756016 29.999283468818277 5 25.700459690075032 18.345115729877836 26.337143058982626 29.617281521064502 6 27.772445843866844 19.260539820463528 24.388359900492993 28.578654435176638 7 33.48761965313835 20.77587207395409 20.180565857793788 25.555942415113762 8 29.455850073419214 17.23695484339757 27.974144325527178 25.333050757656032 9 28.55162809004072 19.7920848534391 24.027066713089816 27.629220343430365 10 30.02110234790112 18.811829828890335 26.590573073565547 24.576494749642997 11 33.16604853237258 17.12739621651352 23.954646603793577 25.751908647320327 12 32.14631364890981 16.44081805658578 21.69886515589599 29.714003138608412 13 27.91833562926071 17.427612689666308 26.849331658063246 27.804720023009732 14 26.50281314178739 18.873875374034323 21.406500249776713 33.216811234401575 15 25.302068353037942 19.61876504337032 25.107030583771074 29.972136019820667 16 27.85505886152278 21.87398133991331 26.382698294958544 23.888261503605364 17 29.375053613688774 20.75231737285356 18.560478763933254 31.312150249524418 18 26.17155371208566 21.624244993112217 22.09646931783204 30.107731976970083 19 28.43538856678626 17.27443648859353 26.439253798372164 27.850921146248055 20 28.069614536500197 17.05644953753463 25.12317776533099 29.750758160634184 21 29.841989736447722 20.52607517522215 22.36842822325497 27.26350686507516 22 29.677349036467398 18.775841797988665 24.444733748114057 27.102075417429873 23 28.822880556270402 20.894029075018796 22.607345958410914 27.675744410299885 24 32.66821074090333 20.357720623483047 21.03751696715562 25.936551668457998 25 28.668771163196393 21.06021566574071 22.908939207862183 27.36207396320071 26 30.574608672494797 20.599353294515662 23.207319739476652 25.618718293512888 27 27.744579284623626 20.95115737149138 24.029340254437155 27.27492308944784 28 28.329367409182566 19.59975647187269 26.210685224450575 25.860190894494174 29 30.959511621479326 18.862916251995415 26.25660890519433 23.920963221330936 30 27.418720750282365 21.83275731393699 24.10045546933485 26.648066466445798 31 28.23221276905286 19.67984040230497 27.724617180772075 24.363329647870096 32 27.036970978344616 18.89541244374124 25.88172875614008 28.185887821774063 33 25.146250146885475 18.293296136102942 28.617547584920437 27.94290613209115 34 24.67621746132765 19.48380506953074 29.471208112160223 26.368769356981392 35 29.69575109934527 18.84162730288877 24.688753708418247 26.77386788934772 36 26.678861642476566 18.975796203375932 24.710054848362574 29.635287305784924 37 24.4797365507268 20.64790884662353 26.384402376249756 28.487952226399916 38 29.969164193569714 21.611099890701343 21.06830972844362 27.351426187285327 39 27.162460164452344 20.884662516408273 26.210171913258712 25.742705405880674 40 26.68317975694868 19.6036161577453 23.457065384637716 30.256138700668306 41 25.263504510689543 23.405334983598028 22.51605353269383 28.815106973018594 42 26.75646037373456 21.000563886215325 26.098585194978348 26.144390545071776 43 24.537305692489507 23.90339039253828 24.92886075022026 26.63044316475195 44 23.870666710639302 23.036261544343347 22.909449352686178 30.183622392331174 45 26.516085735074572 19.11954218057023 28.312261717596073 26.052110366759123 46 24.295332726710196 20.935745331801826 24.848996702595276 29.919925238892702 47 29.471405233376487 19.844632369151455 23.12691135820195 27.557051039270107 48 22.7718542398322 23.27495617454818 25.265220893138896 28.687968692480727 49 28.078700457553214 22.051803851100075 20.820410634715124 29.049085056631586 50 22.632925896192102 28.897130602260688 24.092312215199176 24.377631286348027 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2342.0 1 2289.0 2 1893.5 3 1524.5 4 1431.0 5 1174.5 6 859.5 7 797.0 8 916.5 9 997.5 10 1021.0 11 1046.5 12 1098.5 13 1167.5 14 1230.5 15 1350.5 16 1521.0 17 1749.5 18 2049.0 19 2659.5 20 3486.0 21 4496.0 22 5456.0 23 6544.0 24 8011.5 25 9603.5 26 11538.0 27 14535.0 28 17932.5 29 20653.0 30 23722.0 31 30112.0 32 39302.0 33 45685.0 34 55359.0 35 69934.5 36 78732.0 37 82752.5 38 86645.0 39 96882.5 40 114540.5 41 146501.5 42 197934.0 43 238729.0 44 248882.5 45 236807.0 46 231345.5 47 235937.0 48 259205.5 49 304207.5 50 361114.0 51 401134.0 52 418591.5 53 458120.5 54 463824.0 55 420189.5 56 388693.5 57 396649.0 58 411711.5 59 392757.5 60 373545.5 61 367626.5 62 369355.5 63 363146.5 64 337690.0 65 314714.0 66 269437.5 67 225700.5 68 202348.0 69 178608.0 70 159771.0 71 146693.5 72 135439.5 73 116954.0 74 93829.0 75 76223.5 76 65030.0 77 51285.5 78 40259.5 79 31766.0 80 24052.0 81 18252.0 82 14056.0 83 10887.5 84 8459.0 85 6295.5 86 4481.0 87 2955.0 88 1814.5 89 1177.5 90 784.0 91 504.5 92 385.5 93 341.5 94 218.0 95 85.0 96 54.5 97 50.0 98 31.5 99 12.5 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 45254.0 25 42659.0 26 39151.0 27 36128.0 28 33448.0 29 31671.0 30 38327.0 31 39844.0 32 44016.0 33 37745.0 34 42353.0 35 45482.0 36 37568.0 37 39078.0 38 45667.0 39 50359.0 40 51004.0 41 49922.0 42 55141.0 43 56153.0 44 58327.0 45 88691.0 46 408377.0 47 661307.0 48 1036967.0 49 1309152.0 50 530634.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.029548621664972 #Duplication Level Percentage of deduplicated Percentage of total 1 56.98709061343688 10.274515210221876 2 12.557588621864985 4.528153092575631 3 7.032813101033508 3.803953372564982 4 4.610070756846921 3.3246997943954955 5 3.3356470491510617 3.007010532869118 6 2.549185638832207 2.757639985258522 7 1.9451398654875072 2.454899564652211 8 1.5833433970675306 2.2837573409776986 9 1.2624628192502991 2.0485471304445757 >10 7.366649926903696 23.230986442894245 >50 0.4150105507099771 5.1930351060075814 >100 0.28904827658966503 10.323298755771777 >500 0.03155708785714563 3.968007397842549 >1k 0.028352071121161043 10.613816380288208 >5k 0.00394463598207458 4.861519151106292 >10k+ 0.002095587865477121 7.326160742129156 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCG 43539 0.8787901724216232 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCC 41408 0.8357781175413896 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 26023 0.525247632167204 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAA 21468 0.43330961716041716 No Hit ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGT 21375 0.4314325073040767 No Hit CTCTGCAGGTACCATGGAGCTGAGCTATAGGCTCTTCATCTGCCTCCT 20054 0.404769473753261 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTG 19307 0.3896920429716869 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATC 19215 0.3878351170922963 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA 18064 0.3646033596229633 No Hit CTGCGCGTCTGCTCCTCCTTCTCGCGCTTCTGCTGCCGCCCTAATCCT 17639 0.35602516941925655 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAA 13324 0.26893130888044525 No Hit ACTACTTCTCCCCCGGACTCCTTGGTAGTCTGTTAGTGGGAGATCCTTG 12515 0.2526024715279775 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGA 12336 0.24898953965394574 No Hit ATCCGAATTCAGTCTTCCTGAGGCTCTGGCTCACCTCCAGGCAGGTCCC 11562 0.2333671414947244 No Hit TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA 10706 0.21608965722561144 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA 10591 0.21376849987637314 No Hit AGGCCTGGTTTGCGCTGGAGAGTGGTCTTGGTTGTGAGGGTCATAAGAT 10510 0.21213359774343138 No Hit ACCAGCGAGCGGCCTTGAGAGGCTCTGGCTCTTGCTTCTTAGGCGGCCC 9844 0.19869106909479908 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTG 9280 0.18730730609505644 Illumina Single End Adapter 1 (100% over 32bp) TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACCTG 8988 0.18141358482568615 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAG 8889 0.1794153711076462 No Hit CGGCTCCTGGCCAGGTAACTTACTACTTCCAGTCAATATGCCGACCTT 8860 0.17883003577609916 No Hit CTCTGCAGGTACCATGGAGCTGAGCTATAGGCTCTTCATCTGCCTC 8295 0.1674260887994066 No Hit AGCGAGCGGCCTTGAGAGGCTCTGGCTCTTGCTTCTTAGGCGGCCCGAG 8137 0.16423702044132266 No Hit CTGCGCGTCTGCTCCTCCTTCTCGCGCTTCTGCTGCCGCCCTAATC 8124 0.163974628740974 No Hit ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTC 7963 0.16072500845204035 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGT 7834 0.15812127542550344 No Hit TCGCTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAAT 7450 0.1503706282767425 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCCG 7400 0.1493614294292476 No Hit TCGGAAGAGCTCGTATGCCGTCTTCTGCTTG 7147 0.1442548832609233 Illumina Single End Adapter 1 (100% over 31bp) CGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGT 6935 0.1399758801475449 No Hit ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTG 6555 0.1323059689065835 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTAG 6546 0.13212431311403441 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTG 6496 0.13111511426653952 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTG 6404 0.12925818838714886 No Hit CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGC 6268 0.12651316752196268 No Hit CTGCGCGTCTGCTCCCCCTTCTCACGTTTCTCCTGCTGCCCTAATCCT 6143 0.1239901704032254 No Hit CGGCACAGCTGGTTTGAGCAACTGAACTGGAAACAAGATGCAGGACCC 6076 0.1226378439475822 No Hit ATTCCTGCTCACCGCAGTGTAGACAGGGAAACTTTCTTTGCAGTTCAGG 5694 0.11492756475272106 No Hit CTCTGCAGGTACCATGGAGCTGAGCTATAGGCTCTTCATCTGCCTCCTG 5628 0.11359542227402776 No Hit CAGGTACCATGGAGCTGAGCTATAGGCTCTTCATCTGCCTCCTGCTCT 5512 0.11125408094783955 No Hit ACCACGCTTTTCATCTGTCCCGCTGCGTGTTTTCCTCTTGATCGGGAAC 5508 0.11117334504003996 No Hit ACTACTTCTCCCCCGGACTCCTTGGTAGTCTGTTAGTGGGAGATCCT 5467 0.11034580198509412 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAA 5338 0.10774206895855724 Illumina Single End Adapter 1 (100% over 32bp) ATCCGAATTCAGTCTTCCTGAGGCTCTGGCTCACCTCCAGGCAGGTC 5322 0.10741912532735887 No Hit CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGC 5246 0.1058851430791666 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGG 5159 0.10412913708452544 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGGTTGTGAGGGTTCCTGCTT 5124 0.103422697891279 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATG 5109 0.10311993823703053 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.31955272307079025 0.0 0.0 0.0 0.0 2 0.5402846949948783 0.0 0.0 0.0 0.0 3 0.6811284861512689 0.0 0.0 0.0 0.0 4 0.7804740206986683 0.0 0.0 0.0 0.0 5 0.8898509917901674 0.0 0.0 0.0 0.0 6 1.0174540940674246 0.0 0.0 0.0 0.0 7 1.140031386084157 0.0 0.0 0.0 0.0 8 1.234552950140531 0.0 0.0 0.0 0.0 9 1.321465154886793 0.0 0.0 0.0 0.0 10 1.392351281934836 0.0 0.0 0.0 0.0 11 1.452862844830631 0.0 0.0 0.0 0.0 12 1.5102257073222423 0.0 0.0 0.0 0.0 13 1.5497459341901432 0.0 0.0 0.0 0.0 14 1.589669840597042 0.0 0.0 0.0 0.0 15 1.6239624174349192 0.0 0.0 0.0 0.0 16 1.6554897894306604 0.0 0.0 0.0 0.0 17 1.6873602890345498 0.0 0.0 0.0 0.0 18 1.7206840349788322 4.0367953899796644E-5 0.0 0.0 0.0 19 1.745308486857708 1.2110386169938994E-4 0.0 0.0 0.0 20 1.763756641789915 1.2110386169938994E-4 0.0 0.0 0.0 21 1.7839809866937133 1.2110386169938994E-4 0.0 0.0 0.0 22 1.7980088506738925 1.2110386169938994E-4 0.0 0.0 0.0 23 1.8131064654324165 1.2110386169938994E-4 0.0 0.0 0.0 24 1.8262462344268002 1.2110386169938994E-4 0.0 0.0 0.0 25 1.8397089470523824 1.2110386169938994E-4 0.0 0.0 0.0 26 1.8571680871140446 1.2110386169938994E-4 0.0 0.0 0.0 27 1.8702069362236788 1.2110386169938994E-4 0.0 0.0 0.0 28 1.8824586102322671 1.2110386169938994E-4 0.0 0.0 0.0 29 1.8946497323100058 1.2110386169938994E-4 0.0 0.0 0.0 30 1.9060334953097484 1.2110386169938994E-4 0.0 0.0 0.0 31 1.9171548666091422 1.2110386169938994E-4 0.0 0.0 0.0 32 1.9280542141620873 1.2110386169938994E-4 0.0 0.0 0.0 33 1.9393572412540305 1.2110386169938994E-4 0.0 0.0 0.0 34 1.9486822386048834 1.2110386169938994E-4 0.0 0.0 0.0 35 1.9598237938812273 1.2110386169938994E-4 0.0 0.0 0.0 36 1.9687451116930825 1.2110386169938994E-4 0.0 0.0 0.0 37 1.9763544710031942 1.2110386169938994E-4 0.0 0.0 0.0 38 1.981380281263719 1.2110386169938994E-4 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAGCCA 1630 0.0 261.3408 44 CTATCAT 1095 0.0 163.5294 44 ACTTCTA 1150 0.0 145.87422 44 ACATTGG 785 0.0 144.06813 44 CCCATAC 495 0.0 106.620125 44 GAACACA 2150 0.0 97.313 44 TCGTGCG 5490 0.0 95.0703 43 TTAAGCC 1475 0.0 84.19931 43 CGTGCGC 1680 0.0 83.02498 44 CAATGAA 2350 0.0 82.46188 43 AATGAAG 1345 0.0 75.67594 44 AATCGCA 125 1.8261908E-6 75.39566 44 ATCCTTG 2020 0.0 71.55252 43 CCAGAAT 1350 0.0 69.8108 44 AGGTCCC 2130 0.0 65.59541 43 TGGTACA 640 0.0 64.79315 44 ATAAGAT 2075 0.0 64.754234 43 TCCAGAA 4385 0.0 64.33593 43 GTAGAGA 560 0.0 63.95168 44 AATCCCG 1515 0.0 59.008743 43 >>END_MODULE