ERR841177.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR841177.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	343203
Sequences flagged as poor quality	0
Sequence length	24-50
%GC	52

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATTCCTGCTCACCGCAGTGTAGACAGGGAAACTTTCTTTGCAGTTCAGG	1187	0.34585944761555115	No Hit
CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA	542	0.15792402747062234	No Hit
CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCC	533	0.15530167277092566	No Hit
CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTAG	505	0.14714323592742487	No Hit
ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGT	486	0.14160715378362076	No Hit
CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCCG	479	0.13956754457274556	No Hit
ATTCCTGCTCACCGCAGTGTAGACAGGGAAACTTTCTTTGCAGTTCA	467	0.13607107163981666	No Hit
ATTCCTGCTCACCGCAGTGTAGACAGGGAAACTTTCTTTGCAGTTCAGGA	448	0.13053498949601255	No Hit
CGGCAAGTTTGAATTTCGTGGAGGCTCGGG	433	0.12616439832985143	No Hit
AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCG	387	0.11276125208695728	No Hit
AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCGC	374	0.10897340640961763	No Hit
ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTG	369	0.10751654268756392	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCTACC	55	2.0008883E-10	101.04824	44
TCGCAAA	20	2.9061875E-5	85.66373	43
CGTGCGC	110	0.0	79.39504	44
ACGACAC	50	1.3335102E-6	79.39504	44
TCGTGCG	130	0.0	75.77946	43
CGCTATT	15	0.0034980187	62.431225	42
AATCCCG	90	0.0	61.86825	43
ACGCTAC	115	0.0	55.867645	43
ATCGGGA	25	1.3792127E-5	53.60728	41
CTCGCAA	35	6.5352833E-7	53.512478	42
ACCAGTA	45	0.00671022	52.930035	44
AATCCTG	75	1.03682396E-10	51.39824	43
AACGACA	85	5.456968E-12	50.39043	43
TACGCTA	115	0.0	48.85922	42
GTTCAGG	380	0.0	48.467636	43
GGGAACT	85	3.0999967E-5	46.70297	44
TTCAGGA	225	0.0	45.872692	44
CTAATCC	235	0.0	45.62322	41
TGTGTTA	185	0.0	45.557922	42
CGGGATC	45	7.661583E-9	44.383327	39