##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841171.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10488448 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.005978291545134 35.0 32.0 37.0 23.0 39.0 2 33.817799068079474 35.0 33.0 37.0 25.0 39.0 3 34.49636514382299 35.0 33.0 37.0 30.0 39.0 4 34.81513690109347 35.0 34.0 37.0 31.0 39.0 5 35.33658802522547 35.0 34.0 38.0 32.0 41.0 6 35.43119706557157 35.0 34.0 38.0 32.0 41.0 7 35.382864175900956 35.0 34.0 38.0 32.0 41.0 8 35.28569098116328 35.0 34.0 38.0 31.0 41.0 9 35.23579036669677 35.0 34.0 38.0 31.0 41.0 10 35.13957460627159 35.0 34.0 38.0 31.0 41.0 11 35.056545544202535 35.0 34.0 38.0 31.0 40.0 12 34.96306136046058 35.0 34.0 38.0 31.0 40.0 13 34.86640997791093 35.0 34.0 38.0 30.0 40.0 14 34.83897350685249 35.0 33.0 38.0 30.0 40.0 15 34.78631767064107 35.0 33.0 38.0 30.0 40.0 16 34.7726552107614 35.0 33.0 38.0 30.0 40.0 17 34.74852695079387 35.0 33.0 38.0 30.0 40.0 18 34.66893624299801 35.0 33.0 38.0 30.0 40.0 19 34.59835382699137 35.0 33.0 38.0 30.0 40.0 20 34.53435932561233 35.0 33.0 38.0 30.0 40.0 21 34.34465280277883 35.0 33.0 37.0 29.0 40.0 22 34.38623683885356 35.0 33.0 37.0 30.0 40.0 23 34.4166049161897 35.0 33.0 37.0 30.0 40.0 24 34.401602887290856 35.0 33.0 37.0 30.0 40.0 25 34.398603116329625 35.0 33.0 37.0 30.0 40.0 26 34.377301289626246 35.0 33.0 37.0 30.0 40.0 27 34.440682458490166 35.0 33.0 37.0 30.0 40.0 28 34.48497966959186 35.0 33.0 37.0 30.0 40.0 29 34.51680687165394 35.0 33.0 37.0 30.0 40.0 30 34.56174814334551 35.0 33.0 37.0 30.0 40.0 31 34.5358614393069 35.0 33.0 37.0 30.0 40.0 32 34.54709123869939 35.0 33.0 36.0 30.0 40.0 33 34.51420269413356 35.0 33.0 36.0 30.0 40.0 34 34.518619871651254 35.0 33.0 36.0 30.0 40.0 35 34.4829500786679 35.0 33.0 36.0 30.0 40.0 36 34.42000149431209 35.0 33.0 36.0 30.0 40.0 37 34.381104986581214 35.0 33.0 36.0 30.0 40.0 38 34.368060156089804 35.0 33.0 36.0 30.0 40.0 39 34.2850751888554 35.0 33.0 35.0 30.0 40.0 40 34.193722298850474 35.0 33.0 35.0 30.0 39.0 41 34.06790263201957 35.0 33.0 35.0 29.0 39.0 42 34.014173751489054 35.0 33.0 35.0 29.0 39.0 43 33.93736681101367 35.0 33.0 35.0 29.0 39.0 44 33.874436704127675 35.0 33.0 35.0 29.0 39.0 45 33.86447632921797 35.0 33.0 35.0 29.0 39.0 46 33.80697263667946 35.0 33.0 35.0 29.0 38.0 47 33.805273651018936 35.0 33.0 35.0 29.0 38.0 48 33.89539866736313 35.0 33.0 35.0 29.0 39.0 49 33.87535341684412 35.0 33.0 35.0 29.0 39.0 50 34.475501619933574 35.0 33.0 37.0 29.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 5.0 20 60.0 21 283.0 22 1279.0 23 3976.0 24 10990.0 25 25928.0 26 55270.0 27 106190.0 28 189513.0 29 316125.0 30 490894.0 31 728256.0 32 1056935.0 33 1593348.0 34 2638055.0 35 594788.0 36 562623.0 37 647151.0 38 640542.0 39 572960.0 40 253277.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 47.916927270841214 19.000466036538484 33.082606692620296 2 28.626847365787576 20.833225277943885 28.12376054112105 22.416166815147484 3 29.128017796341272 15.74005992116279 26.384284881805204 28.74763740069074 4 20.70118477013949 17.84635820285327 29.361941823995313 32.09051520301192 5 24.119412138001735 18.637161570520252 28.129910164020455 29.11351612745756 6 27.37839764281617 18.91735555155539 25.536342459818652 28.16790434580979 7 31.816118075810646 19.14157366275735 22.42978179421779 26.612526467214217 8 27.321182314104046 16.40146378186744 27.753248145006776 28.524105759021733 9 26.42588302864256 17.866265819309017 26.33677546954516 29.371075682503268 10 28.20688056040322 18.08024409331104 26.27530784344834 27.437567502837407 11 31.878701214898523 18.122957753139453 24.20365720457402 25.794683827388 12 30.271161186097313 16.717640207588385 23.836090906872016 29.175107699442282 13 26.96747888724814 17.309968071539277 27.08623811644964 28.63631492476294 14 27.403768412638364 18.481752495698125 21.900304029728705 32.21417506193481 15 26.061148417764002 19.396749643035843 24.7826179812304 29.759483957969756 16 29.294496192382326 20.162754298824765 25.59474004161531 24.948009467177602 17 29.749968727499056 20.448506776217034 18.37782863584774 31.42369586043617 18 27.64304118207003 20.32542850953735 21.1818469233961 30.849683384996524 19 29.033828455840176 18.214839793265885 26.418093506303315 26.333238244590618 20 30.3564168883709 17.750719648893718 24.02162836675169 27.871235095983693 21 29.483122765160296 21.067673692046718 22.152524377295858 27.296679165497128 22 30.742927838322696 20.242651725021663 23.98316700430798 25.03125343234767 23 30.018006477221416 21.17750881731978 22.694797171135328 26.109687534323477 24 32.67906748453156 21.065547543354366 20.061576317106212 26.19380865500787 25 30.44135046922572 21.207819751203395 23.5985913451086 24.75223843446228 26 30.62728282413171 20.697839016504894 23.329972402479076 25.344905756884323 27 29.42699604996549 21.459166691299348 23.707533053538814 25.40630420519635 28 30.83927510913137 20.075219290533393 24.35136611724125 24.734139483093987 29 33.09272464398306 20.04503710497782 24.355600181642465 22.50663806939665 30 28.82851447819741 21.15576459111142 22.43631866009577 27.5794022705954 31 27.912853510215868 20.308096542968297 28.208321098335272 23.570728848480567 32 28.11629314822569 18.920854858072815 25.40578252635258 27.55706946734891 33 26.948427214347408 19.558558648764958 27.06788020388763 26.425133933000005 34 25.988628661820336 18.148270286824662 30.10004891983526 25.763052131519743 35 28.329842460690703 18.835511605691615 24.429303692072512 28.405342241545167 36 27.992158883050394 19.34714012795206 25.37339811225628 27.287302876741265 37 24.894103363311107 20.397213075139323 27.057432181930015 27.651251379619556 38 29.831869852436977 21.22632892894112 22.479613073882206 26.462188144739702 39 27.81377099600879 21.99444024807986 24.45500657169146 25.736782184219887 40 29.089563180958898 20.323317988557914 22.452711183801057 28.134407646682135 41 27.148298444998282 21.492863263589907 23.313124704757556 28.04571358665426 42 27.604263034363314 21.981679740193062 24.71823858853403 25.69581863690959 43 24.99150005277393 24.220195738564637 24.58823013242912 26.200074076232312 44 24.30076219111373 23.015436606185645 25.24385327617254 27.439947926528085 45 26.249891002440386 20.385787415810285 26.65262971872235 26.71169186302698 46 25.113112870216792 21.65505275401566 24.101302591545686 29.130531784221862 47 28.283077157308927 20.27943642168721 24.220484195868615 27.217002225135257 48 24.23087277973754 22.980768271982488 24.415374030378967 28.372984917901007 49 27.54895502353678 21.49887466456241 21.465460909557816 29.486709402342992 50 24.644657270882394 25.72810546606786 23.892977575236632 25.734259687813115 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 7352.0 1 7239.0 2 5461.0 3 3740.5 4 3552.5 5 2873.5 6 2085.5 7 2002.0 8 2312.0 9 2572.5 10 2764.0 11 2879.5 12 2874.5 13 2802.0 14 2825.0 15 3086.0 16 3432.5 17 4091.5 18 4979.5 19 6063.5 20 7396.5 21 9457.5 22 11835.5 23 15049.0 24 18744.0 25 22383.5 26 27278.0 27 33903.5 28 41265.0 29 48456.5 30 56336.0 31 68254.0 32 84163.0 33 98109.0 34 113040.0 35 132638.0 36 151575.5 37 168872.5 38 184699.5 39 207851.5 40 239371.0 41 294212.5 42 379986.5 43 476233.5 44 528001.5 45 503419.5 46 495484.0 47 533027.5 48 600739.0 49 695018.5 50 775845.0 51 842656.5 52 918016.0 53 960705.5 54 936144.5 55 889104.5 56 855453.5 57 872477.5 58 917173.0 59 881201.0 60 798722.5 61 747780.0 62 703964.5 63 661891.5 64 640580.5 65 627429.5 66 568605.0 67 499306.5 68 441989.0 69 382164.5 70 333177.5 71 299703.5 72 278498.0 73 250031.5 74 207219.0 75 169227.5 76 144335.5 77 115008.5 78 90120.5 79 72692.0 80 55790.5 81 41806.0 82 31603.0 83 24008.0 84 18320.0 85 14021.5 86 10221.0 87 6888.5 88 4542.5 89 3221.5 90 2241.0 91 1447.0 92 1025.0 93 845.0 94 532.5 95 213.0 96 128.5 97 117.0 98 73.5 99 30.0 100 30.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 107197.0 25 105328.0 26 92974.0 27 88464.0 28 81408.0 29 74098.0 30 90183.0 31 76320.0 32 84983.0 33 77894.0 34 77121.0 35 83314.0 36 76109.0 37 77637.0 38 82417.0 39 91764.0 40 96874.0 41 95887.0 42 107833.0 43 111410.0 44 108123.0 45 161089.0 46 610834.0 47 1310532.0 48 1999558.0 49 2552967.0 50 1966130.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.86093773869952 #Duplication Level Percentage of deduplicated Percentage of total 1 55.69637556442374 10.504858717918216 2 13.56935925474711 5.1186168011566275 3 7.296551478810607 4.128594094471884 4 4.84938050045673 3.6585545476151164 5 3.4508034440073025 3.2542694452955803 6 2.5878259349398967 2.9285294302495966 7 2.034447555906073 2.68601120792157 8 1.58251840516057 2.387822488806366 9 1.231511598154824 2.090471721955603 >10 6.936328959466481 22.76467718911889 >50 0.4190967511598294 5.4879420888235515 >100 0.2862392320594587 10.658863028780093 >500 0.030904624326938922 4.052990699453458 >1k 0.023451369138409492 8.64524969805802 >5k 0.0031231963453242553 4.303929805276893 >10k+ 0.002082130896882837 7.328619035098536 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA 43938 0.41891803248678927 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCC 38926 0.3711321255537521 No Hit ATCCGAATTCAGTCTTCCTGAGGCTCTGGCTCACCTCCAGGCAGGTCCC 32556 0.3103986404852272 No Hit TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACCTG 29587 0.2820913065498346 No Hit ACTACTTCTCCCCCGGACTCCTTGGTAGTCTGTTAGTGGGAGATCCTTG 26394 0.25164828962302144 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCCG 25518 0.2432962436387157 No Hit ATTCCTGCTCACCGCAGTGTAGACAGGGAAACTTTCTTTGCAGTTCAGG 25186 0.24013085634786005 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAA 23806 0.2269735236328578 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGA 22918 0.21850706605972592 No Hit ACTACTTCTCCCCCGGACTCCTTGGTAGTCTGTTAGTGGGAGATCCTTGT 21354 0.20359542231605668 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA 21273 0.20282314409148045 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAA 20755 0.1978843771738202 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGAC 20039 0.19105781904052915 No Hit ATCCGAATTCAGTCTTCCTGAGGCTCTGGCTCACCTCCAGGCAGGTCCCA 19612 0.18698667333813354 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATC 18782 0.1790732051109945 No Hit TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGC 18503 0.1764131356707875 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTAG 17890 0.17056861034158724 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCG 17621 0.1680038838920687 No Hit TCGCTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAAT 16524 0.1575447578135488 No Hit ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGT 16085 0.15335920052232704 No Hit ATCCGAATTCAGTCTTCCTGAGGCTCTGGCTCACCTCCAGGCAGGTC 15491 0.14769582687543475 No Hit ATTCCTGCTCACCGCAGTGTAGACAGGGAAACTTTCTTTGCAGTTCAGGA 15301 0.14588431005235475 No Hit TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACCTGC 14758 0.1407071856579734 No Hit AGCGAGCGGCCTTGAGAGGCTCTGGCTCTTGCTTCTTAGGCGGCCCGAG 14676 0.13992537313432835 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAAT 14050 0.13395690191723314 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGG 13951 0.13301300630941776 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTG 12937 0.12334522705361176 No Hit AAACAGCCGGGGCTCCAGCGGGAGAACGATAATGCAAAGTGCTATGTTCT 12877 0.12277316910948122 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAAC 12805 0.12208669957652458 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCC 12657 0.12067562331433593 No Hit CTGCGCGTCTGCTCCTCCTTCTCGCGCTTCTGCTGCCGCCCTAATCCT 12350 0.11774859350020135 No Hit ACTACTTCTCCCCCGGACTCCTTGGTAGTCTGTTAGTGGGAGATCCT 12138 0.1157273220976068 No Hit AGGCCTGGTTTGCGCTGGAGAGTGGTCTTGGTTGTGAGGGTCATAAGAT 11945 0.11388720237732025 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGG 11875 0.11321980144250131 No Hit TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACC 11729 0.11182779377845034 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAAG 11398 0.10867194078666358 No Hit ATTCCTGCTCACCGCAGTGTAGACAGGGAAACTTTCTTTGCAGTTCA 10648 0.10152121648503191 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.10478194676657596 0.0 0.0 0.0 0.0 2 0.27760065168840997 0.0 0.0 0.0 0.0 3 0.39630267509549555 0.0 0.0 0.0 0.0 4 0.4967846529820237 0.0 0.0 0.0 0.0 5 0.6428787176138929 0.0 0.0 0.0 0.0 6 0.7576240069074089 0.0 0.0 0.0 0.0 7 0.8585731654483104 0.0 0.0 0.0 0.0 8 0.9344375831390879 0.0 0.0 0.0 0.0 9 1.0045718870894913 0.0 0.0 0.0 0.0 10 1.0721891360857203 0.0 0.0 0.0 0.0 11 1.1366600663892312 0.0 0.0 0.0 0.0 12 1.187373003136403 0.0 0.0 0.0 0.0 13 1.2273884563283337 0.0 0.0 0.0 0.0 14 1.270998340269218 8.580869161957994E-5 0.0 0.0 0.0 15 1.3165818241173528 8.580869161957994E-5 0.0 0.0 9.534299068842215E-6 16 1.3495228274002027 8.580869161957994E-5 0.0 0.0 9.534299068842215E-6 17 1.382854736944875 8.580869161957994E-5 0.0 0.0 9.534299068842215E-6 18 1.41542390256404 8.580869161957994E-5 0.0 0.0 9.534299068842215E-6 19 1.4729252602482275 8.580869161957994E-5 0.0 0.0 9.534299068842215E-6 20 1.4973902716588765 8.580869161957994E-5 0.0 0.0 4.767149534421108E-5 21 1.5324860265312847 8.580869161957994E-5 0.0 0.0 4.767149534421108E-5 22 1.549266392892447 8.580869161957994E-5 0.0 0.0 4.767149534421108E-5 23 1.56637092542195 8.580869161957994E-5 0.0 0.0 4.767149534421108E-5 24 1.582073915988333 8.580869161957994E-5 0.0 0.0 4.767149534421108E-5 25 1.6014285430980828 8.580869161957994E-5 0.0 0.0 4.767149534421108E-5 26 1.6417395595611477 8.580869161957994E-5 0.0 0.0 4.767149534421108E-5 27 1.6563461057346138 8.580869161957994E-5 0.0 0.0 4.767149534421108E-5 28 1.6722779194786492 1.0487728975726437E-4 0.0 0.0 4.767149534421108E-5 29 1.6858547613526806 1.0487728975726437E-4 0.0 0.0 4.767149534421108E-5 30 1.6989072167779256 1.0487728975726437E-4 0.0 0.0 4.767149534421108E-5 31 1.712245701175236 1.0487728975726437E-4 0.0 0.0 4.767149534421108E-5 32 1.7244305353852163 1.0487728975726437E-4 0.0 0.0 4.767149534421108E-5 33 1.737073015950501 1.0487728975726437E-4 0.0 3.813719627536886E-5 4.767149534421108E-5 34 1.7489241496930719 1.0487728975726437E-4 0.0 3.813719627536886E-5 4.767149534421108E-5 35 1.7615189587630125 1.0487728975726437E-4 0.0 3.813719627536886E-5 4.767149534421108E-5 36 1.7724929369912499 1.0487728975726437E-4 0.0 3.813719627536886E-5 4.767149534421108E-5 37 1.7821035104526428 1.0487728975726437E-4 0.0 3.813719627536886E-5 4.767149534421108E-5 38 1.788920534286865 1.0487728975726437E-4 0.0 3.813719627536886E-5 4.767149534421108E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAGCCA 6515 0.0 149.62677 44 CTATACG 485 0.0 139.9737 44 ATTAGTC 1725 0.0 114.375244 44 ATGTTCT 2835 0.0 109.62832 44 CCAGAAT 3560 0.0 92.069695 44 TCCTTGT 5850 0.0 86.67229 44 GGTCCCA 5405 0.0 84.780556 44 CGTGCGC 3415 0.0 77.96348 44 TTAAGCC 5540 0.0 77.504074 43 AATCGCA 290 0.0 73.15436 44 TTCAGGA 5300 0.0 69.04805 44 ATCCTTG 6855 0.0 68.63064 43 AGGTCCC 7820 0.0 66.30164 43 AATCCCG 4095 0.0 65.843094 43 TATTAGT 1345 0.0 64.190475 43 TCGTGCG 4650 0.0 62.15452 43 CAATGAA 5570 0.0 61.337753 43 AATGAAG 4530 0.0 60.88122 44 CTATGCG 430 0.0 56.73716 44 ATTAAGC 7470 0.0 56.64444 42 >>END_MODULE