##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841170.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4486055 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 37.38651041951113 39.0 37.0 39.0 34.0 39.0 2 37.972159057345486 39.0 38.0 39.0 35.0 39.0 3 38.18333658414799 39.0 38.0 39.0 35.0 39.0 4 38.527344181023196 39.0 38.0 40.0 35.0 41.0 5 39.2666835337507 40.0 39.0 41.0 36.0 41.0 6 39.195507634213136 40.0 39.0 41.0 35.0 41.0 7 39.115507723378336 40.0 39.0 41.0 35.0 41.0 8 39.16207982291791 40.0 39.0 41.0 35.0 41.0 9 39.15640200577122 40.0 38.0 41.0 35.0 41.0 10 38.97427182680551 40.0 38.0 41.0 35.0 41.0 11 39.10398245228826 40.0 39.0 41.0 35.0 41.0 12 39.09857569735547 40.0 38.0 41.0 35.0 41.0 13 39.07904829521707 40.0 38.0 41.0 35.0 41.0 14 39.027945043027785 40.0 38.0 41.0 35.0 41.0 15 38.98820121465296 40.0 38.0 41.0 35.0 41.0 16 38.911620566399655 40.0 38.0 41.0 35.0 41.0 17 38.839788633888794 40.0 38.0 41.0 35.0 41.0 18 38.77952967585105 40.0 38.0 41.0 35.0 41.0 19 38.6494516897363 40.0 38.0 41.0 35.0 41.0 20 38.56139035299389 40.0 38.0 41.0 35.0 41.0 21 38.2564056838358 40.0 37.0 41.0 34.0 41.0 22 38.1789349439541 40.0 37.0 41.0 34.0 41.0 23 37.988000147122584 40.0 36.0 41.0 33.0 41.0 24 37.87771661292606 39.0 36.0 41.0 33.0 41.0 25 37.824343083743344 39.0 36.0 41.0 33.0 41.0 26 37.64882070967324 39.0 35.0 41.0 33.0 41.0 27 37.58138059882498 39.0 35.0 41.0 33.0 41.0 28 37.58815421939786 39.0 35.0 41.0 33.0 41.0 29 37.631829973268104 39.0 35.0 41.0 33.0 41.0 30 37.66766721791891 39.0 35.0 41.0 34.0 41.0 31 37.64377668629644 39.0 35.0 41.0 34.0 41.0 32 37.593486961091976 39.0 35.0 41.0 34.0 41.0 33 37.450991293309826 39.0 35.0 41.0 34.0 41.0 34 37.39415292401533 38.0 35.0 41.0 34.0 41.0 35 37.30185264007361 38.0 35.0 41.0 34.0 41.0 36 37.115107782031025 37.0 35.0 41.0 33.0 41.0 37 37.01074262353607 37.0 35.0 41.0 33.0 41.0 38 36.92276371557952 37.0 35.0 41.0 33.0 41.0 39 36.77167441589618 37.0 35.0 40.0 33.0 41.0 40 36.62437172810527 36.0 35.0 40.0 33.0 41.0 41 36.461935545105 36.0 35.0 40.0 33.0 41.0 42 36.37487048975955 36.0 35.0 40.0 33.0 41.0 43 36.27812904071337 35.0 35.0 40.0 33.0 41.0 44 36.21916065544746 35.0 35.0 39.0 33.0 41.0 45 36.118976415718095 35.0 35.0 39.0 33.0 41.0 46 35.99708566473982 35.0 35.0 39.0 33.0 41.0 47 35.86207348754062 35.0 35.0 39.0 33.0 41.0 48 35.79610514834896 35.0 35.0 39.0 33.0 41.0 49 35.928963224172136 35.0 35.0 39.0 33.0 41.0 50 36.07647438153747 36.0 35.0 39.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 26.0 14 251.0 15 1222.0 16 191.0 17 7.0 18 0.0 19 0.0 20 4.0 21 8.0 22 35.0 23 93.0 24 287.0 25 714.0 26 1872.0 27 4391.0 28 9480.0 29 18495.0 30 32811.0 31 54093.0 32 84393.0 33 133036.0 34 256423.0 35 293632.0 36 457707.0 37 681590.0 38 805350.0 39 845911.0 40 804033.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 51.312634374745734 18.23845227042468 30.44891335482958 2 29.04748158459939 23.25958999611017 27.170175131602264 20.522753287688182 3 32.78234439836337 14.077357500075232 21.56698925893686 31.57330884262453 4 23.203571957989816 16.77534047175079 26.236437136860786 33.78465043339861 5 26.285812367436424 21.18204079085076 28.68437859098919 23.84776825072363 6 30.984283518592616 21.976993148768795 21.796099245328023 25.242624087310567 7 33.47480135664855 20.691966549674493 22.85854720907345 22.974684884603512 8 31.950232442535814 17.500788554754678 26.161203997721827 24.387775004987677 9 26.841133245134085 20.230001638410585 26.189870610146333 26.738994506308995 10 30.90940704026143 19.642581288013634 25.000941807445514 24.447069864279417 11 29.3935094420376 23.22942986655313 23.395477763870485 23.981582927538785 12 26.59100256238499 16.763971908503127 28.79287035045268 27.8521551786592 13 24.28418733163102 16.955721675280397 25.991856987932604 32.768234005155975 14 24.829543998011616 22.1609409603761 20.947112775032853 32.06240226657943 15 23.62001803366209 22.073157819063745 26.291117696952 28.015706450322163 16 29.703113314482323 21.912459833862936 23.648327985278826 24.736098866375915 17 29.061279899599985 19.95124892583796 19.62871609911158 31.35875507545048 18 27.491905471511163 19.30025378645603 19.04479548289087 34.16304525914194 19 26.181645120267138 23.732031818602316 25.256734480517963 24.829588580612587 20 33.782688798955874 17.234518970453998 21.91386418579353 27.068928044796596 21 28.264053829032417 20.491612340909775 24.241967608511263 27.00236622154655 22 29.530467192221227 21.585268125335066 25.884680415197764 22.999584267245943 23 30.622518003011557 18.43731296205686 23.153661736202523 27.786507298729063 24 31.349972303059147 19.340890827241306 20.898696070378094 28.410440799321453 25 26.313193566047644 22.348940535756164 24.779944319669127 26.557921578527065 26 28.646111103103333 20.373624363982298 25.02234169825735 25.957922834657023 27 28.767998955458747 22.33488971793306 24.062508358823496 24.834602967784697 28 28.017805984712812 17.727272310032323 28.10893337580284 26.145988329452024 29 34.48035391746121 18.91032966529104 23.706396916346037 22.90291950090171 30 25.99028985552514 19.6155057653232 22.41576784840315 31.97843653074851 31 25.871027444280763 18.753394792499904 33.08479410455297 22.290783658666356 32 28.391836885165784 18.29337415715376 26.816462341408116 26.498326616272337 33 28.8245017697575 20.251695052819745 22.266966492818845 28.656836684603913 34 23.201946169458036 21.51584041038365 31.475467381515454 23.806746038642864 35 26.72380408761782 22.77145605700128 22.551427369374114 27.953312486006787 36 25.6521456387092 20.42877415140149 26.790162866723357 27.12891734316595 37 24.289924293728006 21.00379177742177 23.23492910181713 31.471354827033093 38 29.2875291737086 25.835396549991827 21.10354473368634 23.773529542613232 39 26.204075649615017 26.508589747322574 21.167193600886737 26.12014100217567 40 26.698005219392574 26.524336565563004 19.968237680624227 26.80942053442019 41 28.83759032255363 23.40642376615325 20.860706399581165 26.895279511711955 42 26.853817376632392 26.12140406223852 23.468022279594912 23.556756281534177 43 24.407276044509892 23.85678447705623 26.315524698078413 25.420414780355465 44 24.79207755807157 23.695100026427234 25.12847150350128 26.384350911999917 45 25.24259108054045 25.09395616043861 26.06303484957569 23.600417909445255 46 26.2422162279117 26.15495545441993 22.31661879976364 25.286209517904723 47 32.322251444603836 20.65831079973944 21.147385660615782 25.87205209504095 48 24.779235444569885 22.78791045235554 22.435136416036535 29.997717687038044 49 27.729550214727528 22.217605597659098 20.157254364426464 29.895589823186913 50 24.80426513760149 29.342470378178444 22.616369254756453 23.236895229463613 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2498.0 1 2509.5 2 3668.0 3 4685.5 4 4329.0 5 3071.5 6 1781.5 7 1586.5 8 1711.5 9 1814.5 10 1807.5 11 1753.0 12 1742.5 13 1810.0 14 1932.5 15 2230.0 16 2543.0 17 3031.0 18 3502.5 19 4589.5 20 5726.5 21 7075.0 22 8570.0 23 10715.5 24 12821.5 25 14472.5 26 16703.5 27 20108.0 28 23485.5 29 27134.5 30 31016.5 31 35721.5 32 41250.5 33 48035.0 34 54913.0 35 60137.5 36 67570.5 37 78625.5 38 101381.0 39 136327.0 40 164990.5 41 189054.0 42 214011.0 43 298124.0 44 358118.5 45 277140.5 46 209693.0 47 210000.5 48 227026.5 49 258936.0 50 306958.5 51 352073.5 52 370645.5 53 372125.0 54 359487.0 55 324390.5 56 293411.0 57 297460.5 58 320902.5 59 320803.5 60 285360.0 61 259599.5 62 251412.5 63 243828.0 64 257318.0 65 275672.5 66 242891.5 67 197084.0 68 169625.0 69 149621.5 70 133107.5 71 121006.0 72 119147.5 73 110804.0 74 90149.0 75 74101.0 76 66871.0 77 52528.5 78 39777.5 79 36644.5 80 33188.5 81 23051.0 82 14365.5 83 12334.0 84 10210.0 85 7789.0 86 5760.5 87 3653.0 88 1864.0 89 1269.0 90 836.0 91 503.0 92 342.0 93 282.0 94 196.0 95 89.0 96 49.5 97 41.0 98 36.5 99 31.5 100 31.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 25593.0 25 20334.0 26 28622.0 27 53870.0 28 82967.0 29 112630.0 30 17824.0 31 21132.0 32 20261.0 33 17669.0 34 20683.0 35 20243.0 36 21839.0 37 21354.0 38 16982.0 39 19606.0 40 23985.0 41 27643.0 42 36646.0 43 35437.0 44 29383.0 45 30730.0 46 51745.0 47 122886.0 48 546998.0 49 1181070.0 50 1877923.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.065203887340978 #Duplication Level Percentage of deduplicated Percentage of total 1 46.103522653637626 6.023519233944192 2 10.404429630818141 2.718719889162617 3 6.515545560394344 2.553807935514343 4 5.428936524487323 2.837206503354368 5 4.539385960821443 2.965400155073269 6 3.714569824397248 2.911896726570865 7 3.1537206487963645 2.8842802296169245 8 2.7856072398071112 2.9115621230506434 9 2.225991089947752 2.6174724697414575 >10 14.152723271933013 31.891906165910527 >50 0.5481717194147312 4.890011797756095 >100 0.3532243939403074 9.037342325618653 >500 0.035209112954521005 3.2526509375107087 >1k 0.030562224950288902 8.082590292855658 >5k 0.0050043409275326856 4.561566581041405 >10k+ 0.0033958027722543224 9.860066633278246 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA 138888 3.0959941418462327 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCCG 23176 0.5166231800546359 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCC 20786 0.46334697189401375 No Hit CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC 18956 0.4225538920053365 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGTGCTTCTACCGGGAAGCAGTGGT 18418 0.41056117234407513 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAAG 18297 0.4078639249853156 No Hit CTGCGCGTCTGCTCCTCCTTCTCGCGCTTCTGCTGCCGCCCTAATCCTG 16960 0.37806045623604706 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAA 16372 0.3649531715505049 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA 16355 0.3645742194422494 Illumina Single End Adapter 1 (100% over 32bp) ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAA 16197 0.3610521939655221 Illumina Single End Adapter 1 (100% over 32bp) CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGAC 14797 0.3298443732856597 No Hit CTGCGCGTCTGCTCCTCCTTCTCGCGCTTCTGCTGCCGCCCTAATCCT 14670 0.32701337812398645 No Hit CTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGG 14659 0.32676817381864465 No Hit CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGC 14600 0.3254529870899933 No Hit TCGCTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATC 13824 0.30815493791315535 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAA 13812 0.3078874423073279 No Hit CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGC 10794 0.2406122974417389 No Hit ATCCGAATTCAGTCTTCCTGAGGCTCTGGCTCACCTCCAGGCAGGTCCC 10583 0.23590883303927393 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAAT 10111 0.22538733921006318 No Hit AAGCAGTGGTATCAACGCAGAGTGCAG 9127 0.20345269953221706 No Hit CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGCC 8865 0.1976123788049857 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTAG 8806 0.1962971920763343 No Hit CAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGGCGC 8588 0.19143768857047005 No Hit CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCG 8486 0.1891639759209372 No Hit CGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGT 8370 0.18657818506460577 No Hit ATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGGC 8313 0.18530758093692565 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGA 8270 0.18434905501604418 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGTG 8221 0.18325678129224898 No Hit TCGCTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAAT 8148 0.18162951635679903 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA 7519 0.16760828835134656 Illumina Single End Adapter 1 (100% over 32bp) TCGCTGCGCGTCTGCTCCTCCTTCTCGCGCTTCTGCTGCCGCCCTAATC 7124 0.15880322465952826 No Hit ATCCGAATTCAGTCTTCCTGAGGCTCTGGCTCACCTCCAGGCAGGTCCCA 6841 0.15249478662209892 No Hit ACTACTTCTCCCCCGGACTCCTTGGTAGTCTGTTAGTGGGAGATCCTTGT 6733 0.1500873261696524 No Hit CTCTGCAGGTACCATGGAGCTGAGCTATAGGCTCTTCATCTGCCTCCTG 6600 0.14712258320506547 No Hit TACCTGGTTGATCCTGCCAGTAGCATATG 6465 0.1441132576395073 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGTGCTTCTACC 6232 0.1389193846263588 No Hit AGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGTCGCT 6130 0.13664567197682595 No Hit TCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA 6086 0.13566485475545886 Illumina Single End Adapter 1 (100% over 31bp) AAGCAGTGGTATCAACGCAGAGTGCAGTGCTTCTACCGGGAAGCAGTGG 5980 0.13330197690398357 No Hit AAGCAGTGGTATCAACGCAGAGTG 5839 0.1301589035355117 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAA 5748 0.12813039519132066 Illumina Single End Adapter 1 (100% over 32bp) TCGCTGCGCGTCTGCTCCTCCTTCTCGCGCTTCTGCTGCCGCCCTAAT 5658 0.12612417814761523 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGTGCTTCTAC 5579 0.12436316540925156 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA 5556 0.1238504654980824 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAA 5514 0.1229142308776865 Illumina Single End Adapter 1 (100% over 32bp) AGGCCTGGTTTGCGCTGGAGAGTGGTCTTGGTTGTGAGGGTCATAAGATG 5462 0.12175508325243448 No Hit ACTACTTCTCCCCCGGACTCCTTGGTAGTCTGTTAGTGGGAGATCCTTG 5088 0.11341813687081412 No Hit CCCTTCCACCTTCTGCCGTGTTAGGATTTGGTGTTCCTCCCTTCCAGAA 4734 0.10552701649890604 No Hit TCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAA 4684 0.10441245147462526 Illumina Single End Adapter 1 (100% over 31bp) AGGCCTGGTTTGCGCTGGAGAGTGGTCTTGGTTGTGAGGGTCATAAGAT 4642 0.10347621685422939 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.13720295448896636 0.0 0.0 0.0 0.0 2 0.23831629349172045 0.0 0.0 0.0 0.0 3 0.3137277630345593 0.0 0.0 0.0 0.0 4 0.42050309236065986 0.0 0.0 0.0 0.0 5 0.5493691004680058 0.0 0.0 0.0 0.0 6 0.6975616660963809 0.0 0.0 0.0 0.0 7 0.8133203895181846 0.0 0.0 0.0 0.0 8 0.9357665030856732 0.0 0.0 0.0 0.0 9 1.0194480451086756 0.0 0.0 0.0 0.0 10 1.099652144255922 0.0 0.0 0.0 0.0 11 1.1828655689687264 0.0 0.0 0.0 0.0 12 1.2410012806352129 0.0 0.0 0.0 0.0 13 1.2996051096118972 0.0 0.0 0.0 0.0 14 1.3647625809313528 0.0 0.0 0.0 0.0 15 1.4357826642785254 0.0 0.0 0.0 0.0 16 1.4897499027542016 0.0 0.0 0.0 0.0 17 1.57365435778206 0.0 0.0 0.0 0.0 18 1.6179471718469791 0.0 0.0 0.0 0.0 19 1.689413081203864 0.0 0.0 0.0 0.0 20 1.7211781843958667 0.0 0.0 0.0 0.0 21 1.7600096298418098 0.0 0.0 0.0 0.0 22 1.7844631864745306 0.0 0.0 0.0 2.229130048561598E-5 23 1.8153589289475942 0.0 0.0 0.0 2.229130048561598E-5 24 1.8459203019133739 0.0 0.0 0.0 2.229130048561598E-5 25 1.8761027227708977 0.0 0.0 0.0 2.229130048561598E-5 26 1.9349294647524384 0.0 0.0 0.0 2.229130048561598E-5 27 1.956953269632227 0.0 0.0 0.0 2.229130048561598E-5 28 1.989922103050453 0.0 0.0 0.0 2.229130048561598E-5 29 2.038338807705211 0.0 0.0 0.0 2.229130048561598E-5 30 2.0564170523990457 0.0 0.0 0.0 2.229130048561598E-5 31 2.0706389021088687 0.0 0.0 0.0 2.229130048561598E-5 32 2.0836347302919824 0.0 0.0 0.0 2.229130048561598E-5 33 2.0966974323765535 0.0 0.0 0.0 2.229130048561598E-5 34 2.1105849125790925 0.0 0.0 0.0 2.229130048561598E-5 35 2.123068040851037 0.0 0.0 0.0 2.229130048561598E-5 36 2.1366880254477487 0.0 0.0 0.0 2.229130048561598E-5 37 2.149327192823093 0.0 0.0 0.0 2.229130048561598E-5 38 2.159893269253275 0.0 0.0 0.0 2.229130048561598E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAGCCA 16260 0.0 91.225464 44 ATTAGTC 2335 0.0 85.217445 44 AATGAAG 3485 0.0 58.64008 44 TTAAGCC 16205 0.0 56.500416 43 TATTAGT 2335 0.0 52.742897 43 CTATACG 205 0.0 52.467434 44 AATCCCG 3135 0.0 50.725666 43 CCAGAAT 2390 0.0 49.708355 44 CAATGAA 4820 0.0 48.80692 43 ATTAAGC 16245 0.0 48.07718 42 AGATTAA 16545 0.0 45.35592 40 GATTAAG 16895 0.0 45.268944 41 AATCCTG 3695 0.0 44.97944 43 AAGATTA 16640 0.0 44.799225 39 TAATCCT 5720 0.0 44.24031 42 AAAGATT 17030 0.0 43.527767 38 CTAATCC 11150 0.0 43.21222 41 CAAAGAT 17065 0.0 43.060352 37 CGCTACC 660 0.0 42.96404 44 CTCAAAG 16730 0.0 42.952354 35 >>END_MODULE