##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841165.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 907547 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.671498005062 39.0 35.0 39.0 32.0 39.0 2 37.578494557306676 39.0 37.0 39.0 35.0 39.0 3 37.92293842632944 39.0 37.0 39.0 35.0 39.0 4 38.18958467164786 39.0 38.0 40.0 35.0 41.0 5 38.93250928051109 40.0 38.0 41.0 35.0 41.0 6 38.88503625707539 40.0 38.0 41.0 35.0 41.0 7 38.8226031268904 40.0 38.0 41.0 35.0 41.0 8 38.7860639724444 40.0 38.0 41.0 35.0 41.0 9 38.82955703671546 40.0 38.0 41.0 35.0 41.0 10 38.7367960006479 40.0 38.0 41.0 35.0 41.0 11 38.82829980155298 40.0 38.0 41.0 35.0 41.0 12 38.82028699340089 40.0 38.0 41.0 35.0 41.0 13 38.840662797629214 40.0 38.0 41.0 35.0 41.0 14 38.83169025956782 40.0 38.0 41.0 35.0 41.0 15 38.81737915501897 40.0 38.0 41.0 35.0 41.0 16 38.74869621077476 40.0 38.0 41.0 35.0 41.0 17 38.67525428435111 40.0 38.0 41.0 35.0 41.0 18 38.65755933301526 40.0 38.0 41.0 35.0 41.0 19 38.528423321326606 40.0 38.0 41.0 35.0 41.0 20 38.4056638388976 40.0 37.0 41.0 34.0 41.0 21 38.22939748575005 40.0 37.0 41.0 34.0 41.0 22 38.16173156872316 40.0 37.0 41.0 34.0 41.0 23 37.97743918496783 40.0 36.0 41.0 33.0 41.0 24 37.953397454897654 40.0 36.0 41.0 33.0 41.0 25 37.8662704061947 40.0 36.0 41.0 33.0 41.0 26 37.755711579306116 39.0 36.0 41.0 33.0 41.0 27 37.75313844105603 39.0 36.0 40.0 33.0 41.0 28 37.85623997778823 39.0 36.0 41.0 34.0 41.0 29 37.87796673002598 39.0 36.0 41.0 34.0 41.0 30 37.913792513495174 39.0 35.0 41.0 34.0 41.0 31 37.890823762766196 40.0 35.0 41.0 34.0 41.0 32 37.893179589409826 39.0 35.0 41.0 34.0 41.0 33 37.84335642581093 39.0 35.0 41.0 34.0 41.0 34 37.78926645286056 39.0 35.0 41.0 34.0 41.0 35 37.689331361546294 39.0 35.0 41.0 34.0 41.0 36 37.62863743800372 39.0 35.0 41.0 34.0 41.0 37 37.53751662367406 39.0 35.0 41.0 34.0 41.0 38 37.40560905471799 38.0 35.0 41.0 34.0 41.0 39 37.31674081837036 38.0 35.0 41.0 34.0 41.0 40 37.12632158766342 37.0 35.0 41.0 33.0 41.0 41 36.988063491749806 37.0 35.0 41.0 33.0 41.0 42 36.90973339890319 37.0 35.0 41.0 33.0 41.0 43 36.80976429502945 37.0 35.0 40.0 33.0 41.0 44 36.72687019401508 36.0 35.0 40.0 33.0 41.0 45 36.60689935064935 36.0 35.0 40.0 33.0 41.0 46 36.57096105164022 36.0 35.0 40.0 33.0 41.0 47 36.458880083317574 36.0 35.0 40.0 33.0 41.0 48 36.39342602518706 36.0 35.0 40.0 33.0 41.0 49 36.5104079489458 36.0 35.0 40.0 33.0 41.0 50 36.616332127156156 37.0 35.0 40.0 33.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 44.0 15 278.0 16 105.0 17 0.0 18 0.0 19 0.0 20 1.0 21 0.0 22 14.0 23 30.0 24 77.0 25 179.0 26 393.0 27 779.0 28 1786.0 29 3488.0 30 6366.0 31 10670.0 32 17191.0 33 29843.0 34 66045.0 35 51490.0 36 71072.0 37 120813.0 38 159119.0 39 189990.0 40 177773.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 37.51199662386631 31.97696648217668 30.511036893957005 2 33.44774430415174 26.953535188811156 21.483846015688442 18.114874491348658 3 27.654104966464548 16.584815993000916 20.376465351105782 35.384613689428754 4 23.55624557185468 18.28775809958052 26.018266822544728 32.13772950602007 5 23.346449274803398 25.66247257717782 29.468336075156436 21.522742072862343 6 31.1805339007236 23.079355669733907 20.478278259968903 25.26183216957359 7 33.09602698262459 20.720579760607443 21.066457164201964 25.116936092566007 8 28.89293887809667 19.295529597916143 29.50965624920803 22.301875274779157 9 24.833865353529898 22.20612265811027 27.099312762865175 25.86069922549466 10 30.0903424285464 22.82504377183771 23.502143690629794 23.582470108986094 11 29.651797647945504 24.703624164919283 23.55988174717122 22.08469643996399 12 24.616466144453124 21.89616625915793 29.206090703842335 24.281276892546614 13 22.661085321200996 17.885575072145024 28.01529838124086 31.438041225413123 14 21.912804515909368 22.3523409806875 21.494534167376457 34.24032033602668 15 22.303858643133633 26.66517546749645 27.909298361407174 23.12166752796274 16 32.94958828578575 23.81143896679731 20.505163919885142 22.7338088275318 17 26.29142071980845 25.036499487078906 19.795999546029023 28.876080247083625 18 25.055892422100452 20.44158594541109 20.120831207639934 34.38169042484852 19 26.56215050019448 27.071765980164113 22.941181007705385 23.424902511936022 20 33.17833676933537 17.590934684374474 23.905979525027355 25.32474902126281 21 28.786057361216557 20.485440423471182 26.043058926975682 24.685443288336582 22 28.313134195804736 24.90339343306738 23.79942856953965 22.98404380158824 23 29.64144005764991 19.88734467746574 22.140891876674157 28.3303233882102 24 31.316284445874427 19.992022451729774 20.845862528331864 27.845830574063935 25 23.5631954515418 28.813813014728385 23.918543748309183 23.70444778542063 26 25.343006607868183 20.498870102431425 26.797895906863918 27.36022738283647 27 24.987168309197802 25.490910231956626 21.817236378795997 27.70468508004958 28 23.158151210031562 19.21771502071021 28.467557781769347 29.156575987488882 29 36.51407854790114 19.888416987972473 22.138843253038544 21.458661211087843 30 23.982183416418394 21.83097843721424 21.991917642547417 32.194920503819944 31 23.4638157231339 20.643479024235155 34.048916363860684 21.84378888877026 32 28.178773186405177 19.763807580987834 27.039039310988272 25.01837992161872 33 29.21006975603336 23.87247687760987 22.09351855175467 24.823934814602104 34 20.907715037295954 26.967556724682595 29.78883643832655 22.335891799694906 35 24.513406061073933 22.142195438513536 25.86100831335009 27.48339018706244 36 23.829820210787354 22.110513212957223 30.914590437073773 23.14507613918165 37 23.111222408347942 22.29420073861385 25.545754915380332 29.04882193765788 38 25.133991915953242 31.247415020515128 20.75352685755558 22.865066205976046 39 23.938104344547096 32.6822919854945 20.040303919960234 23.339299749998162 40 27.133813094706767 29.179499853071544 20.134362693204775 23.552324359016918 41 28.387126258465422 22.950234493593886 20.399398728040545 28.26324051990015 42 24.95231282784931 31.690982157049753 21.558327372436814 21.798377642664125 43 22.245492772306072 22.25574570720869 32.36914066651579 23.12962085396945 44 23.660998763320748 25.69648213867431 26.43357823444517 24.20894086355977 45 24.667588271103895 26.970119724025977 27.84369926948052 20.51859273538961 46 25.565811214377632 28.618271827067698 24.622611491420983 21.193305467133687 47 33.42962178070587 24.497076371851303 19.721212560849548 22.35208928659328 48 26.860604879316508 23.444217046205157 19.90655015214025 29.788627922338083 49 23.74666774375959 22.14912351563131 25.139833589142903 28.964375151466193 50 21.66270639896772 31.47137622879826 19.586785415777605 27.279131956456414 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 994.0 1 983.5 2 1109.5 3 1218.0 4 1124.5 5 859.5 6 597.0 7 569.5 8 625.0 9 663.0 10 687.5 11 696.0 12 704.5 13 744.5 14 772.5 15 826.5 16 915.5 17 1171.5 18 1412.0 19 1793.0 20 2245.5 21 2698.0 22 3090.5 23 3699.5 24 4295.0 25 4731.5 26 5504.0 27 6679.5 28 7787.5 29 8820.5 30 9866.0 31 10866.5 32 12212.0 33 14107.5 34 16247.0 35 18268.0 36 20218.5 37 22199.0 38 25690.5 39 31829.5 40 37249.0 41 41071.5 42 46018.0 43 68623.0 44 88343.0 45 70322.5 46 50554.5 47 47439.5 48 48295.0 49 51167.5 50 57456.5 51 78228.0 52 93094.0 53 79150.5 54 62442.0 55 55723.0 56 51872.5 57 51575.0 58 52384.5 59 51537.5 60 48681.5 61 45448.0 62 42987.5 63 41366.5 64 42299.5 65 43649.5 66 38689.5 67 33198.5 68 29112.5 69 25708.0 70 22810.0 71 19953.5 72 19408.5 73 17334.5 74 13333.0 75 11331.0 76 10657.5 77 7998.0 78 5567.5 79 6128.5 80 6655.0 81 4298.5 82 2140.0 83 1975.5 84 1857.0 85 1520.0 86 1185.0 87 690.5 88 301.5 89 240.5 90 175.5 91 103.0 92 60.0 93 47.5 94 25.0 95 4.5 96 4.0 97 4.0 98 4.5 99 5.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 5615.0 25 4063.0 26 5547.0 27 9907.0 28 13824.0 29 21066.0 30 4576.0 31 3718.0 32 3461.0 33 3240.0 34 3502.0 35 3172.0 36 3234.0 37 2983.0 38 2845.0 39 3473.0 40 3704.0 41 4369.0 42 5477.0 43 5709.0 44 5582.0 45 5931.0 46 10563.0 47 33194.0 48 119842.0 49 222933.0 50 396017.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.699245158095348 #Duplication Level Percentage of deduplicated Percentage of total 1 56.10823637961767 10.49181667450835 2 9.706357531578314 3.630031181502162 3 5.77285765983602 3.23844241932187 4 4.585979486912954 3.4301741886312667 5 3.708935337416074 3.467714557493313 6 3.086157467302683 3.462528904654769 7 2.5241607114670677 3.3039929973508553 8 2.046328240782096 3.061183475865471 9 1.742534232935581 2.932566733623245 >10 10.130715751366083 31.695355848384054 >50 0.3362795242980466 4.364374711869468 >100 0.20393337877810153 7.5221850864106115 >500 0.02406293554903853 3.1616350237573894 >1k 0.021656641994134678 8.146727805114839 >5k 6.015733887259633E-4 0.6312920996700516 >10k+ 0.0012031467774519266 7.459978291842269 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA 39417 4.3432461349109195 No Hit CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC 26900 2.9640338186341864 No Hit CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGC 5612 0.6183701780734221 No Hit TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCC 4035 0.444605072795128 No Hit CTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGG 4028 0.4438337628794983 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAA 3830 0.4220167109802578 No Hit CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGC 3772 0.4156258573936116 No Hit CAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGGCGC 3386 0.3730936249031731 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAA 3111 0.34279216393200573 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGA 2833 0.31216014156842564 No Hit CGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGT 2738 0.30169236414202244 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCC 2667 0.293869077854921 No Hit ATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGGC 2517 0.27734100823428426 No Hit CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGT 2470 0.2721622130864848 No Hit CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCG 2280 0.25122665823367824 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCG 1973 0.2173992090767751 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 1818 0.20032020380211712 No Hit ATCAGATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGG 1792 0.19745533840120677 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA 1776 0.19569234430833887 Illumina Single End Adapter 1 (100% over 32bp) ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAA 1751 0.19293766603823273 Illumina Single End Adapter 1 (100% over 32bp) TACCTGGTTGATCCTGCCAGTAGCATATG 1693 0.18654681245158655 No Hit AGGCCTGGTTTGCGCTGGAGAGTGGTCTTGGTTGTGAGGGTCATAAGAT 1587 0.17486697658633657 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGTGCTGCAGGAGGGAAGCAGTGGT 1537 0.16935762004612434 No Hit TGGAGAAGGGTTCCATGTGAACAGCAGTTGAACATGGGTCAGTCGGTCC 1533 0.16891687152290735 No Hit AAGCAGTGGTATCAACGCAGAGTG 1523 0.1678150002148649 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA 1486 0.16373807637510784 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGTGC 1470 0.16197508228223992 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGAC 1434 0.1580083455732871 No Hit ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGT 1397 0.15393142173353005 No Hit CGCGACCTCAGATCAGACGTGGCGACCCG 1363 0.15018505928618572 No Hit AAGCAGTGGTATCAACGCAGAGTGCAG 1356 0.14941374937055601 No Hit CTGCGCGTCTGCTCCTCCTTCTCGCGCTTCTGCTGCCGCCCTAATCCT 1317 0.14511645126919046 No Hit AACTGTGGTAATTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCTT 1258 0.13861541055174004 No Hit ATGGTTCCTTTGGTCGCTCGCTCCTCTCCTACTTGGATAACTGTGGTAAT 1198 0.13200418270348532 No Hit CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGCC 1164 0.12825782025614102 No Hit TCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA 1154 0.12715594894809856 Illumina Single End Adapter 1 (100% over 31bp) TCGCTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAAT 1092 0.12032434683823538 No Hit CGATGGTAGTCGCCGTGCCTACCATGGTGACCACGGGTGACGGGGAATCA 1070 0.11790022996054199 No Hit TACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGGCGCT 1013 0.11161956350470004 No Hit ACACCCGGGTGAGGGGTCTGCTGGCTGCACCTGTCGGTCTCATGGCTCC 991 0.10919544662700664 No Hit CTTCCGCCACGGCCGTCTCTGGAGAGCAGCAGCCATGGCCCTACGCTAC 979 0.1078732010573557 No Hit AGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGTCGCT 964 0.10622039409529202 No Hit TCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGGC 939 0.1034657158251859 No Hit CAACTTTCGATGGTAGTCGCCGTGCCTACCATGGTGACCACGGGTGACGG 934 0.10291478017116469 No Hit CCCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCAT 929 0.10236384451714345 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.24946366414081034 1.1018713080424484E-4 0.0 0.0 0.0 2 0.44581713123397465 1.1018713080424484E-4 0.0 0.0 0.0 3 0.5222870000121206 1.1018713080424484E-4 0.0 0.0 0.0 4 0.6091144590858655 1.1018713080424484E-4 0.0 0.0 0.0 5 0.7197423384133274 1.1018713080424484E-4 0.0 0.0 0.0 6 0.828497036517117 1.1018713080424484E-4 0.0 0.0 0.0 7 0.9160958055064917 1.1018713080424484E-4 0.0 0.0 0.0 8 1.002151954664607 1.1018713080424484E-4 0.0 0.0 0.0 9 1.0677132974931325 1.1018713080424484E-4 0.0 0.0 0.0 10 1.1297486521359223 1.1018713080424484E-4 0.0 0.0 0.0 11 1.198395234626967 1.1018713080424484E-4 0.0 0.0 0.0 12 1.2455553266111838 1.1018713080424484E-4 0.0 0.0 0.0 13 1.2944784126882685 1.1018713080424484E-4 0.0 0.0 0.0 14 1.3497923523519995 1.1018713080424484E-4 0.0 0.0 0.0 15 1.4087424673322704 1.1018713080424484E-4 0.0 0.0 0.0 16 1.4482996472909944 1.1018713080424484E-4 0.0 0.0 0.0 17 1.5211333407526002 1.1018713080424484E-4 0.0 0.0 0.0 18 1.550773678938942 1.1018713080424484E-4 0.0 0.0 0.0 19 1.6229462496157223 1.1018713080424484E-4 0.0 0.0 0.0 20 1.6455346114305927 1.1018713080424484E-4 0.0 0.0 0.0 21 1.6865242240897718 1.1018713080424484E-4 0.0 0.0 0.0 22 1.7076801532041868 1.1018713080424484E-4 0.0 0.0 0.0 23 1.7377612399137454 1.1018713080424484E-4 0.0 0.0 0.0 24 1.77213962472467 1.1018713080424484E-4 0.0 0.0 0.0 25 1.7995762202949268 1.1018713080424484E-4 0.0 0.0 0.0 26 1.8492706162876413 1.1018713080424484E-4 0.0 0.0 0.0 27 1.8697654226172309 1.1018713080424484E-4 0.0 0.0 0.0 28 1.888276860592344 1.1018713080424484E-4 0.0 0.0 0.0 29 1.9140606492005372 1.1018713080424484E-4 0.0 0.0 0.0 30 1.9320211515216292 1.1018713080424484E-4 0.0 0.0 0.0 31 1.9474473498342235 1.1018713080424484E-4 0.0 0.0 0.0 32 1.9596781213534946 1.1018713080424484E-4 0.0 0.0 0.0 33 1.9748839454044804 1.1018713080424484E-4 0.0 0.0 0.0 34 1.9917425764175298 1.1018713080424484E-4 0.0 0.0 0.0 35 2.0059567162912777 1.1018713080424484E-4 0.0 0.0 0.0 36 2.021493101734676 1.1018713080424484E-4 0.0 0.0 0.0 37 2.034935931692794 1.1018713080424484E-4 0.0 0.0 0.0 38 2.0491500715665416 1.1018713080424484E-4 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTAGTC 3035 0.0 89.9683 44 TAAGCCA 4410 0.0 88.83738 44 TTAAGCC 4765 0.0 57.400085 43 TATTAGT 3345 0.0 57.082787 43 ATATTAG 3360 0.0 47.77053 42 ATTAAGC 4780 0.0 47.706837 42 CATATTA 3355 0.0 45.90216 41 AACGACA 40 1.9948602E-6 45.534637 43 GATTAAG 4910 0.0 45.523376 41 AGATTAA 4865 0.0 44.78002 40 GCATATT 3390 0.0 44.69011 40 AAGCATA 3365 0.0 44.068886 38 TAAGCAT 3360 0.0 43.9501 37 CAATGAA 690 0.0 43.55487 43 AAGATTA 5050 0.0 42.932278 39 CAAAGAT 4980 0.0 42.91524 37 GTCTCAA 4890 0.0 42.84931 33 TTAAGCA 3440 0.0 42.82031 36 AAAGATT 5075 0.0 42.514496 38 CTCAAAG 4970 0.0 42.482727 35 >>END_MODULE