##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841162.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6361550 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 37.40591884053415 39.0 37.0 39.0 34.0 39.0 2 37.978044501733066 39.0 38.0 39.0 35.0 39.0 3 38.270844369689776 39.0 38.0 39.0 35.0 40.0 4 38.57603775809355 39.0 38.0 40.0 35.0 41.0 5 39.37910729303393 40.0 39.0 41.0 36.0 41.0 6 39.30158216158012 40.0 39.0 41.0 36.0 41.0 7 39.167231413727784 40.0 39.0 41.0 35.0 41.0 8 39.19686931644018 40.0 39.0 41.0 35.0 41.0 9 39.210692991487925 40.0 39.0 41.0 35.0 41.0 10 39.08349490297176 40.0 39.0 41.0 35.0 41.0 11 39.21522097601999 40.0 39.0 41.0 35.0 41.0 12 39.2284796944141 40.0 39.0 41.0 35.0 41.0 13 39.243249365327635 40.0 39.0 41.0 35.0 41.0 14 39.220023264770376 40.0 39.0 41.0 35.0 41.0 15 39.216112268236515 40.0 39.0 41.0 35.0 41.0 16 39.160978535105436 40.0 38.0 41.0 35.0 41.0 17 39.06766244075736 40.0 38.0 41.0 35.0 41.0 18 39.04115710793753 40.0 38.0 41.0 35.0 41.0 19 38.8881456563259 40.0 38.0 41.0 35.0 41.0 20 38.88466222854493 40.0 38.0 41.0 35.0 41.0 21 38.60264573885295 40.0 38.0 41.0 35.0 41.0 22 38.53339563471167 40.0 38.0 41.0 34.0 41.0 23 38.37848024459448 40.0 38.0 41.0 34.0 41.0 24 38.278262844746955 40.0 37.0 41.0 34.0 41.0 25 38.27827919175165 40.0 37.0 41.0 34.0 41.0 26 38.180855642510664 40.0 37.0 41.0 34.0 41.0 27 38.14187210863036 40.0 37.0 41.0 34.0 41.0 28 38.202900709496596 40.0 37.0 41.0 34.0 41.0 29 38.327791298105105 40.0 37.0 41.0 34.0 41.0 30 38.43232283846021 40.0 37.0 41.0 34.0 41.0 31 38.43889335334072 40.0 37.0 41.0 34.0 41.0 32 38.4470923705408 40.0 37.0 41.0 35.0 41.0 33 38.40098205679671 40.0 36.0 41.0 35.0 41.0 34 38.28961227265262 40.0 36.0 41.0 34.0 41.0 35 38.2171390899218 40.0 36.0 41.0 34.0 41.0 36 38.15524594884428 40.0 35.0 41.0 34.0 41.0 37 38.10971003543643 40.0 35.0 41.0 34.0 41.0 38 38.00343932069389 40.0 35.0 41.0 34.0 41.0 39 37.874048144782 39.0 35.0 41.0 34.0 41.0 40 37.71487717643984 39.0 35.0 41.0 34.0 41.0 41 37.581335138784276 39.0 35.0 41.0 33.0 41.0 42 37.48206351558061 39.0 35.0 41.0 33.0 41.0 43 37.38450376109184 39.0 35.0 41.0 33.0 41.0 44 37.30792581130488 38.0 35.0 41.0 33.0 41.0 45 37.21789108696552 38.0 35.0 41.0 33.0 41.0 46 37.147042365612414 37.0 35.0 41.0 33.0 41.0 47 37.010632136332845 37.0 35.0 41.0 33.0 41.0 48 36.982863468646165 37.0 35.0 41.0 33.0 41.0 49 37.274398575541916 38.0 35.0 41.0 33.0 41.0 50 37.491461516926904 39.0 35.0 41.0 33.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 3.0 14 113.0 15 1276.0 16 1974.0 17 74.0 18 0.0 19 0.0 20 6.0 21 15.0 22 51.0 23 124.0 24 270.0 25 734.0 26 1954.0 27 4554.0 28 9982.0 29 19767.0 30 36356.0 31 61436.0 32 97511.0 33 156498.0 34 320228.0 35 312839.0 36 437077.0 37 651154.0 38 1006463.0 39 1408778.0 40 1832313.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 47.30534225149531 20.592402794916335 32.10225495358836 2 26.186118163026308 28.9285787268826 26.46230871407126 18.42299439601984 3 31.029246017087033 14.974526648379719 21.418396459982237 32.57783087455101 4 21.63364274429974 17.307715886851476 25.892479034197642 35.16616233465115 5 24.44132326241246 21.8536834576479 31.477721624446875 22.227271655492764 6 34.464996738216314 22.480354630553876 20.440049987817435 22.614598643412375 7 35.725161320747304 19.208133237968735 22.864427694508414 22.20227774677555 8 30.744236860513553 17.97925033993288 28.019617860427097 23.25689493912647 9 26.274304218311574 21.941822354614835 29.605237717223005 22.178635709850585 10 32.82198520800748 18.575410080876516 23.75682027178911 24.84578443932689 11 27.339814982197737 28.019617860427097 22.33399092988344 22.30657622749173 12 25.269250418530078 17.599688755098995 31.184915625908783 25.94614520046215 13 23.91010052581525 17.136091046993265 23.56370695820987 35.39010146898162 14 22.634169345521137 23.207190071602046 21.59176615761882 32.566874425258 15 22.878025009628157 22.537101806949565 29.612264306654822 24.972608876767456 16 31.54885208793454 21.7438674536866 20.863248736550055 25.8440317218288 17 28.180757834175633 19.47767446612854 20.58185505104888 31.75971264864695 18 26.57478130329872 20.358749047008985 18.61335680769624 34.45311284199605 19 23.447933286698998 29.73545755358364 23.326642091943 23.489967067774366 20 37.80185646579843 16.80470954405766 20.1087628015185 25.284671188625413 21 27.276780030024128 20.788659996384528 27.091070572423387 24.843489401167954 22 26.972577437888567 25.45112433290629 23.682891748080266 23.89340648112488 23 33.287799357074924 18.95234651932312 22.638256399776786 25.121597723825168 24 29.585934245584806 19.725868695522315 21.328402669160816 29.359794389732063 25 25.548987522072387 25.312098490653145 23.209935764832935 25.92897822244154 26 26.48373776995111 20.621880900462184 28.452799481236134 24.441581848350573 27 26.884079809996 26.929918036390788 22.277170181010632 23.908831972602588 28 25.489532573521164 17.935541551961666 30.477898681600184 26.097027192916983 29 36.79993611233691 19.056883072403824 22.218367373821867 21.924813441437408 30 25.59525611150688 20.966873842887523 21.82590805799221 31.61196198761339 31 24.570857869892667 19.508814820500735 33.29560437544961 22.624722934156996 32 25.438434579937937 19.816155346768376 28.446523778829775 26.298886294463912 33 32.8186196322175 20.113795788441024 21.822241888512714 25.245342690828764 34 22.551319744122114 21.47926192703961 32.54091180065005 23.428506528188223 35 24.312512454249298 22.114158916826995 23.00030418232519 30.573024446598517 36 24.091710286387848 21.44592315989538 30.919169084063185 23.543197469653585 37 24.219691907198776 21.86944179335205 22.3097189338014 31.601147365647776 38 26.412823882934234 29.355418006850275 20.679011967414347 23.552746142801144 39 24.68379292762675 30.248137505499116 20.10305917149467 24.965010395379455 40 25.372805681588428 31.102617687334295 19.809065714555626 23.71551091652165 41 31.177694513012987 23.242038028819742 20.3769677870477 25.203299671119566 42 26.46969832091923 29.57150565028346 21.594357347834816 22.3644386809625 43 24.19946849241025 22.106679879284716 29.161623350299536 24.532228278005494 44 25.294898573492752 21.155001095412818 28.460932274422163 25.08916805667226 45 25.34328591109273 28.972133099732496 24.33145922748353 21.353121761691245 46 26.93957040826751 29.895181922793494 20.07733840892813 23.087909260010868 47 35.58069126792328 19.655286658932955 20.712837819467993 24.05118425367578 48 24.364439908171594 21.95771723478557 21.027997395446388 32.64984546159645 49 26.80496909159722 20.84645147046819 19.477882681647163 32.87069675628743 50 23.02974642703116 35.65135995659149 20.851682926240493 20.46721069013685 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3970.0 1 3824.0 2 5103.0 3 6174.0 4 5534.0 5 4021.0 6 2433.0 7 2190.5 8 2392.5 9 2547.0 10 2663.5 11 2735.5 12 2726.0 13 2850.5 14 3012.5 15 3427.0 16 3994.0 17 5516.5 18 6943.0 19 8211.0 20 9595.5 21 11891.0 22 14333.5 23 17718.0 24 21006.5 25 24704.0 26 29443.0 27 34085.0 28 38818.5 29 45313.0 30 52221.0 31 61062.0 32 70893.0 33 80668.5 34 90779.5 35 101847.0 36 117095.0 37 134225.0 38 163283.0 39 210667.0 40 253571.5 41 292150.5 42 325986.0 43 529027.0 44 710958.5 45 530448.5 46 362959.0 47 344257.0 48 349521.0 49 408389.0 50 482459.0 51 500542.5 52 472700.5 53 461764.0 54 435276.5 55 384327.0 56 351797.5 57 353247.0 58 368218.0 59 372518.0 60 356442.5 61 337605.0 62 317883.0 63 298445.5 64 311545.5 65 328099.5 66 286074.0 67 238326.0 68 205682.0 69 181945.0 70 168918.0 71 167807.5 72 179574.0 73 161322.5 74 119760.0 75 103052.0 76 100516.0 77 75153.5 78 53282.0 79 53982.0 80 54489.5 81 37143.5 82 21163.0 83 19239.0 84 17510.5 85 13635.5 86 9870.0 87 6095.5 88 2996.5 89 2106.5 90 1557.0 91 1158.0 92 863.5 93 697.5 94 402.5 95 112.0 96 76.0 97 68.0 98 103.0 99 137.5 100 137.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 40869.0 25 28801.0 26 37275.0 27 78254.0 28 103191.0 29 159193.0 30 25475.0 31 31917.0 32 25955.0 33 28321.0 34 26158.0 35 21672.0 36 23079.0 37 19797.0 38 22046.0 39 26342.0 40 31371.0 41 36451.0 42 45133.0 43 45476.0 44 44748.0 45 46933.0 46 79734.0 47 191595.0 48 829668.0 49 1536603.0 50 2775493.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.848684544847236 #Duplication Level Percentage of deduplicated Percentage of total 1 44.464569032752486 5.268466518916674 2 9.994780626883292 2.368500054857813 3 6.570605024565104 2.3355907861458043 4 5.630602001024542 2.6686090763090164 5 4.6601617047514985 2.760839298378901 6 3.886497748598355 2.762993148444055 7 3.360869433366747 2.787531719866745 8 2.826818235770097 2.6795262033009184 9 2.3964893633502067 2.555572183327655 >10 15.178137281236403 31.058836280284964 >50 0.5962794272247114 4.836943144081368 >100 0.34997385300303463 8.18306858532946 >500 0.04259055124793726 3.4112819644232997 >1k 0.03294220588712853 7.6990404586766275 >5k 0.005099839405120313 4.141298027742121 >10k+ 0.003583670933327788 14.481902549914812 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA 390764 6.142591035203685 No Hit CTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGG 49422 0.7768861362403816 No Hit CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGC 42962 0.6753385574270422 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGTGCTAGTTTAGGGAAGCAGTGGT 38793 0.6098042143817152 No Hit CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGC 32928 0.5176097020380254 No Hit CGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGT 29578 0.46494957989798086 No Hit ATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGGC 23261 0.3656498809252462 No Hit CAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGGCGC 20550 0.32303448059042217 No Hit CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCG 18955 0.29796197467598307 No Hit TACCTGGTTGATCCTGCCAGTAGCATATG 18366 0.2887032248430021 No Hit CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGCC 18329 0.2881216055835449 No Hit AAGCAGTGGTATCAACGCAGAGTGCAG 17898 0.2813465271828407 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCC 15652 0.24604066618984366 No Hit AAGCAGTGGTATCAACGCAGAGTG 15440 0.24270814502754834 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA 15425 0.24247235343587648 Illumina Single End Adapter 1 (100% over 32bp) ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAA 15363 0.24149774819029954 Illumina Single End Adapter 1 (100% over 32bp) ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAA 14459 0.2272873749322099 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAA 14226 0.22362474554157402 No Hit CGGGGAGGTAGTGACGAAAAATAACAATACAGGACTCTTTCGAGGCCCTG 13772 0.2164881200336396 No Hit CGAGGCCCTGTAATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATC 13654 0.21463322617915445 No Hit TCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGGC 12758 0.20054860843662314 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGAC 11581 0.182046828210106 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGA 11039 0.17352689203103017 No Hit TCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA 10828 0.17021009030817963 Illumina Single End Adapter 1 (100% over 31bp) ATCCGAATTCAGTCTTCCTGAGGCTCTGGCTCACCTCCAGGCAGGTCCC 10490 0.16489691977584078 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGTG 10256 0.16121857094576006 No Hit CGATGGTAGTCGCCGTGCCTACCATGGTGACCACGGGTGACGGGGAATCA 9560 0.15027784109218667 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGTGCT 9474 0.14892596929993476 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCCG 9055 0.142339524172568 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA 8996 0.14141207724532545 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTAG 8625 0.13558016521130856 No Hit AACTGTGGTAATTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCTT 8139 0.12794051764114092 No Hit TCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAA 8090 0.12717026510834623 Illumina Single End Adapter 1 (100% over 31bp) AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCG 7964 0.12518961573830278 No Hit CAACTTTCGATGGTAGTCGCCGTGCCTACCATGGTGACCACGGGTGACGG 7840 0.12324040524714888 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGTGCTAG 7775 0.12221864168323758 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAAG 7520 0.11821018462481628 No Hit AGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA 7344 0.11544356328253334 Illumina Single End Adapter 2 (100% over 34bp) CCGTGGCGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGG 7303 0.11479906626529698 No Hit AGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGTCGCT 7303 0.11479906626529698 No Hit ACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGTCG 7248 0.11393449709583357 No Hit CTGCGCGTCTGCTCCTCCTTCTCGCGCTTCTGCTGCCGCCCTAATCCT 7196 0.11311708624470451 No Hit ATCAGATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGG 7066 0.11107355911688188 No Hit AGGCCTGGTTTGCGCTGGAGAGTGGTCTTGGTTGTGAGGGTCATAAGAT 6922 0.10880995983683223 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGGTTGTGAGGGTTCCTGCTT 6784 0.10664067719345129 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA 6583 0.10348106986504861 Illumina Single End Adapter 1 (100% over 32bp) TCGCTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATC 6483 0.10190912592056968 No Hit ACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTAC 6420 0.10091880123554793 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.48181653842223987 0.0 0.0 0.0 0.0 2 0.733500483372763 0.0 0.0 0.0 0.0 3 0.8111230753511329 0.0 0.0 0.0 0.0 4 0.9122305098600184 0.0 0.0 0.0 0.0 5 1.0501528715486006 0.0 0.0 0.0 0.0 6 1.1873992973410568 0.0 0.0 0.0 0.0 7 1.2943858022022934 0.0 0.0 0.0 0.0 8 1.4046891087863806 0.0 0.0 0.0 0.0 9 1.4862887189442824 0.0 0.0 0.0 0.0 10 1.5603272787292406 0.0 0.0 0.0 0.0 11 1.6464383680077967 0.0 0.0 0.0 0.0 12 1.704333063482956 0.0 0.0 0.0 0.0 13 1.767933915476574 0.0 0.0 0.0 0.0 14 1.836172002106405 0.0 0.0 0.0 0.0 15 1.9098018564657984 0.0 0.0 0.0 0.0 16 1.9592709323985507 0.0 0.0 0.0 0.0 17 2.051795552970581 0.0 0.0 0.0 0.0 18 2.0943795144265156 0.0 0.0 0.0 0.0 19 2.19033097279751 0.0 0.0 0.0 0.0 20 2.2200721522270515 0.0 0.0 0.0 0.0 21 2.2680793202914384 0.0 0.0 0.0 0.0 22 2.2911082990780547 0.0 0.0 0.0 0.0 23 2.325895418569374 0.0 0.0 0.0 0.0 24 2.359535018981223 0.0 0.0 0.0 0.0 25 2.3865252965079264 0.0 0.0 0.0 0.0 26 2.4436340200108466 0.0 0.0 0.0 0.0 27 2.467008826465248 0.0 0.0 0.0 0.0 28 2.487491256061809 0.0 0.0 0.0 0.0 29 2.5166979745502274 0.0 0.0 0.0 0.0 30 2.532637486147244 0.0 0.0 0.0 0.0 31 2.547791025772021 0.0 0.0 0.0 1.57194394447894E-5 32 2.5609481965873098 0.0 0.0 0.0 1.57194394447894E-5 33 2.5736495036586997 0.0 0.0 0.0 1.57194394447894E-5 34 2.588693007207363 0.0 0.0 0.0 1.57194394447894E-5 35 2.6029190999048972 0.0 0.0 0.0 1.57194394447894E-5 36 2.617129473162987 0.0 0.0 0.0 1.57194394447894E-5 37 2.6305224355699477 0.0 0.0 0.0 1.57194394447894E-5 38 2.641824712530751 0.0 0.0 0.0 1.57194394447894E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAGCCA 43465 0.0 89.064026 44 TTAAGCC 43865 0.0 57.995415 43 CGACGGG 10000 0.0 49.330624 44 ATTAAGC 43800 0.0 48.74377 42 GATTAAG 44710 0.0 46.6272 41 AGATTAA 44385 0.0 46.007984 40 AAGATTA 45150 0.0 45.00784 39 AAAGATT 45065 0.0 44.7493 38 CAAAGAT 45185 0.0 44.296856 37 CAATGAA 3305 0.0 44.23861 43 ATTAGTC 520 0.0 44.061256 44 GTCTCAA 44570 0.0 43.756832 33 CTCAAAG 45080 0.0 43.674664 35 TCAAAGA 45445 0.0 43.55174 36 TCTCAAA 45180 0.0 43.22194 34 TTGTCTC 44900 0.0 43.00407 31 TGTCTCA 45100 0.0 42.96414 32 GCTTGTC 44800 0.0 42.956318 29 ATGCTTG 44415 0.0 42.901573 27 TATGCTT 44250 0.0 42.87211 26 >>END_MODULE