##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841158.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 930688 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.54857266882134 39.0 35.0 39.0 32.0 39.0 2 37.50158270011003 39.0 37.0 39.0 35.0 39.0 3 37.727115854077844 39.0 37.0 39.0 35.0 40.0 4 38.11767316221978 39.0 37.0 40.0 35.0 41.0 5 38.47522155652592 40.0 38.0 41.0 34.0 41.0 6 38.394221264269014 40.0 38.0 41.0 34.0 41.0 7 38.195040658093795 40.0 37.0 41.0 33.0 41.0 8 38.10891405068079 40.0 37.0 41.0 33.0 41.0 9 38.09120779466373 40.0 37.0 41.0 33.0 41.0 10 38.11489134919543 40.0 37.0 41.0 34.0 41.0 11 38.154002200522626 40.0 37.0 41.0 34.0 41.0 12 37.9852560686288 39.0 36.0 41.0 34.0 41.0 13 37.849515627148946 39.0 36.0 41.0 33.0 41.0 14 37.77259618690689 39.0 35.0 41.0 33.0 41.0 15 37.63886823511209 39.0 35.0 40.0 33.0 41.0 16 37.54183786618072 39.0 35.0 40.0 33.0 41.0 17 37.40269671468849 38.0 35.0 40.0 33.0 41.0 18 37.32591803053225 38.0 35.0 40.0 33.0 41.0 19 37.103886587126944 38.0 35.0 40.0 33.0 41.0 20 37.027298084857655 38.0 35.0 40.0 33.0 41.0 21 36.71348185428414 37.0 35.0 40.0 33.0 41.0 22 36.4816200488241 37.0 35.0 40.0 32.0 41.0 23 36.4066475553569 37.0 35.0 40.0 32.0 41.0 24 36.225309663388806 37.0 34.0 40.0 31.0 41.0 25 36.104716169957335 36.0 34.0 40.0 31.0 41.0 26 35.89867460726887 36.0 34.0 40.0 31.0 41.0 27 35.803887749649725 36.0 34.0 39.0 31.0 41.0 28 35.97350924012056 36.0 35.0 39.0 32.0 41.0 29 36.02630461824559 35.0 35.0 39.0 32.0 41.0 30 36.02040906306273 35.0 35.0 39.0 32.0 41.0 31 35.957559598128334 35.0 35.0 39.0 32.0 41.0 32 35.92343021742037 35.0 35.0 39.0 33.0 41.0 33 35.85847846185777 35.0 35.0 39.0 33.0 41.0 34 35.791576641868616 35.0 35.0 39.0 33.0 41.0 35 35.71042278640369 35.0 35.0 39.0 33.0 41.0 36 35.61475586663151 35.0 35.0 38.0 32.0 41.0 37 35.5634497355007 35.0 35.0 38.0 33.0 41.0 38 35.45135972194844 35.0 35.0 37.0 33.0 41.0 39 35.38499082287976 35.0 35.0 37.0 32.0 41.0 40 35.26257565658563 35.0 35.0 37.0 32.0 41.0 41 35.141488032251175 35.0 34.0 37.0 32.0 40.0 42 35.0832580987457 35.0 35.0 36.0 32.0 40.0 43 35.05116239606313 35.0 34.0 36.0 32.0 40.0 44 35.007301035751766 35.0 34.0 36.0 32.0 40.0 45 34.86809957856529 35.0 34.0 36.0 32.0 40.0 46 34.875321993021345 35.0 34.0 36.0 32.0 40.0 47 34.84928219681162 35.0 34.0 35.0 32.0 39.0 48 34.694507416106745 35.0 34.0 35.0 32.0 39.0 49 34.88318657226036 35.0 34.0 36.0 32.0 39.0 50 35.48378562894692 35.0 34.0 38.0 32.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 4.0 14 34.0 15 48.0 16 7.0 17 0.0 18 0.0 19 0.0 20 4.0 21 3.0 22 27.0 23 76.0 24 207.0 25 483.0 26 1073.0 27 2179.0 28 4258.0 29 7691.0 30 13497.0 31 21231.0 32 32604.0 33 51411.0 34 96109.0 35 125804.0 36 155758.0 37 140611.0 38 120028.0 39 95841.0 40 61700.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 40.61575952413698 18.79899601155274 40.58524446431027 2 26.152158403245775 20.384812095997802 32.77607533351671 20.68695416723972 3 33.953698769082656 13.661291431715034 22.21378163251272 30.17122816668959 4 24.788113739513136 16.274734390042635 27.087595413285655 31.849556457158574 5 28.01927176454408 17.48158351671022 29.9124948425251 24.586649876220605 6 31.434487175079077 22.010061373951313 23.35121974281392 23.20423170815569 7 36.75764595653968 17.96445210424976 21.619919887223215 23.657982051987346 8 30.765089911979093 15.63069471186907 26.823489719433365 26.780725656718467 9 27.072445330766058 21.85748607481777 25.964125464172742 25.105943130243435 10 34.19147985146472 16.97335734424426 21.55824508320726 27.27691772108376 11 31.893287546417277 20.03764956677211 24.762971049374226 23.30609183743639 12 27.072552778159814 16.033085201485353 25.832287512034107 31.062074508320727 13 24.218642552606244 17.432050268188696 28.7071499793701 29.642157199834962 14 24.148479404483563 21.581561167652318 21.08558399807454 33.184375429789576 15 26.004203342043734 19.07395389217439 27.469033661119518 27.452809104662357 16 29.144245977169582 22.224956161463346 24.245289506257738 24.38550835510934 17 26.809951347820103 17.965419130793563 23.2535500618897 31.971079459496632 18 28.374063058726446 20.887988240957228 18.850248418374363 31.88770028194196 19 25.499415486177966 24.592881825058452 25.65693336542429 24.250769323339295 20 33.867955748865356 15.552902798789713 20.921941617384128 29.6571998349608 21 28.835012377939762 17.643506739100538 24.103458946499796 29.41802193645991 22 26.45483771145647 21.81214327465273 27.901187078806217 23.831831935084583 23 30.735971668271215 18.209109819832207 20.992427107688076 30.062491404208497 24 31.474887395131347 19.009485455920778 20.95643223077981 28.559194918168064 25 29.0704478225366 20.378115586993083 26.00647858228286 24.544958008187457 26 30.241004242388627 17.28811456408314 25.69561895557573 26.775262237952507 27 26.404528283669453 22.89541565040316 22.638126805547785 28.061929260379603 28 27.15464457431932 17.412766241942403 26.57098763712539 28.861601546612885 29 37.21057010221164 18.42529650026688 22.59251798462899 21.771615412892483 30 26.723225722613105 22.002919226984982 21.14281471030501 30.131040340096902 31 25.529586109522867 18.372793148111413 33.677289116559116 22.420331625806604 32 27.811464239052157 16.85377313126148 25.28282944381763 30.05193318586873 33 31.7814958772807 19.26262759674711 20.942494198003736 28.01338232796845 34 23.097034781670853 21.132232453016243 29.905694703045576 25.86503806226733 35 26.02906954564529 22.99038168084538 21.412085606378515 29.568463167130815 36 25.35175819171121 19.59227210623457 27.50629209712601 27.549677604928206 37 26.77077288695514 19.336861595952932 22.764276581758818 31.12808893533311 38 28.122849641491023 25.387684318603164 20.268667077036195 26.22079896286962 39 25.306015356340716 25.624511839153204 19.086345101021205 29.983127703484875 40 26.228389500489524 27.00247325925763 18.482180569899484 28.286956670353362 41 29.9601279637027 20.954424592993423 20.082469316454826 29.002978126849055 42 28.94895013740103 23.189979494967734 22.381403494017924 25.479666873613315 43 24.539084257493936 21.44992563460137 26.028014294127626 27.98297581377706 44 27.964667774525875 21.294960584486024 24.365175256355176 26.375196384632925 45 26.750555388924756 23.2603744617684 27.55644124061431 22.432628908692536 46 27.920771756978652 26.11889367816092 20.774194376026273 25.186140188834155 47 36.17694161589183 18.204344378599448 19.046693723395375 26.572020282113346 48 24.1798907157491 21.249185005742472 21.677346842459905 32.893577436048524 49 28.97117492721849 19.580203428817885 19.256011213744024 32.1926104302196 50 26.317000230043707 31.777941034603025 18.267325630579485 23.63773310477378 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 339.0 1 439.0 2 1042.5 3 1517.5 4 1369.5 5 868.0 6 377.0 7 292.5 8 333.5 9 338.5 10 314.0 11 291.5 12 278.5 13 276.0 14 275.0 15 291.5 16 318.5 17 431.5 18 553.0 19 729.5 20 926.5 21 1127.0 22 1309.0 23 1490.0 24 1662.0 25 1991.0 26 2489.0 27 2984.5 28 3424.0 29 4044.5 30 4851.0 31 5616.0 32 6308.0 33 6947.5 34 8125.5 35 9696.5 36 11485.5 37 13474.0 38 17235.0 39 23616.5 40 29101.0 41 33457.5 42 39535.0 43 60436.5 44 74963.0 45 59981.0 46 47471.0 47 42214.5 48 39418.0 49 44029.5 50 51747.5 51 58259.0 52 61625.0 53 66793.0 54 69147.0 55 64072.0 56 59646.5 57 62021.0 58 66817.5 59 67096.5 60 63098.0 61 61279.0 62 60672.5 63 59583.5 64 69353.5 65 79302.0 66 63933.0 67 45975.5 68 39766.5 69 35588.5 70 32241.5 71 31145.0 72 32065.0 73 27780.5 74 20830.0 75 18897.5 76 19056.0 77 13871.5 78 9189.0 79 9570.5 80 9979.0 81 6632.0 82 3681.0 83 3396.0 84 3035.0 85 2314.0 86 1683.5 87 939.5 88 328.0 89 234.5 90 154.5 91 77.0 92 45.5 93 38.0 94 25.5 95 10.0 96 6.0 97 6.0 98 5.5 99 5.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 6103.0 25 5763.0 26 7395.0 27 13982.0 28 18778.0 29 16795.0 30 4882.0 31 4356.0 32 4650.0 33 4235.0 34 4933.0 35 4436.0 36 3754.0 37 3729.0 38 3654.0 39 4081.0 40 4556.0 41 6024.0 42 7134.0 43 7725.0 44 6887.0 45 7316.0 46 12736.0 47 33650.0 48 176674.0 49 286946.0 50 269514.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.16979212690902 #Duplication Level Percentage of deduplicated Percentage of total 1 58.46111798469106 10.622263612885389 2 9.873221025698722 3.587887473199465 3 5.500641281897934 2.9983652597033945 4 4.116686409227196 2.991973452293187 5 3.360407892894606 3.052895643775967 6 2.7239383675571553 2.9696036343015244 7 2.203335280720858 2.8023900825607906 8 1.8823464305086037 2.736147468253642 9 1.554082081233347 2.5413613527747647 >10 9.64236606248652 30.166880197396672 >50 0.3834697690455244 4.8428938362792895 >100 0.23667274808273436 8.553775935536441 >500 0.03295443327734276 4.266763223438262 >1k 0.0251652035936072 9.598039888364054 >5k 0.0023966860565340187 2.9726467089197217 >10k+ 0.0011983430282670093 5.296112230317441 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA 33916 3.6441858066290744 No Hit CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGC 14731 1.5828075574198872 No Hit CTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGG 9090 0.9766968092421949 No Hit CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCG 6761 0.7264518291844313 No Hit CGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGT 5925 0.636625808004401 No Hit CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGC 5529 0.5940766400770183 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAA 4991 0.5362699422362811 No Hit ATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGGC 4770 0.5125240682162013 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCC 4230 0.45450247558795215 No Hit CAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGGCGC 4186 0.4497747902626874 No Hit CTGCGCGTCTGCTCCTCCTTCTCGCGCTTCTGCTGCCGCCCTAATCCT 3484 0.3743467198459634 No Hit ATCCGAATTCAGTCTTCCTGAGGCTCTGGCTCACCTCCAGGCAGGTCCC 3036 0.3262102874432678 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAA 2841 0.30525804566084447 No Hit CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGCC 2824 0.3034314399669921 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGA 2686 0.28860369962866184 No Hit TCGCTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAAT 2685 0.28849625223490577 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAAG 2626 0.28215685600330076 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAA 2625 0.2820494086095448 Illumina Single End Adapter 1 (100% over 32bp) CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC 2563 0.2753876701966717 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA 2548 0.2737759592903315 Illumina Single End Adapter 1 (100% over 32bp) CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA 2263 0.2431534520698666 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGAC 2220 0.23853321413835785 No Hit TCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGGC 2128 0.2286480539128043 No Hit TCGCTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATC 2032 0.21833310411222664 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCCG 2012 0.21618415623710632 No Hit CTGCGCGTCTGCTCCTCCTTCTCGCGCTTCTGCTGCCGCCCTAATCCTG 2007 0.21564691926832624 No Hit AGGCCTGGTTTGCGCTGGAGAGTGGTCTTGGTTGTGAGGGTCATAAGAT 1935 0.207910706917893 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTAG 1695 0.1821233324164489 No Hit ATGGTAGTCGCCGTGCCTACCATGGTGACCACGGGTGACGGGGAATCAG 1664 0.17879246321001238 No Hit CGGGGAGGTAGTGACGAAAAATAACAATACAGGACTCTTTCGAGGCCCTG 1657 0.17804033145372025 No Hit CGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGTC 1589 0.17073390867831112 No Hit TACCTGGTTGATCCTGCCAGTAGCATATG 1463 0.15719553706505296 No Hit CCCTTCCACCTTCTGCCGTGTTAGGATTTGGTGTTCCTCCCTTCCAGA 1413 0.1518231673772521 No Hit TCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA 1376 0.14784761380827946 Illumina Single End Adapter 1 (100% over 31bp) CGATGGTAGTCGCCGTGCCTACCATGGTGACCACGGGTGACGGGGAATCA 1326 0.1424752441204786 No Hit CAACTTTCGATGGTAGTCGCCGTGCCTACCATGGTGACCACGGGTGACGG 1319 0.1417231123641865 No Hit CTGTGCGTCTGCTCCTCCTTCTCGCGCTTCTCCTGCCGCCCTAATCCT 1308 0.1405411910328703 No Hit TCGCTGCGCGTCTGCTCCTCCTTCTCGCGCTTCTGCTGCCGCCCTAAT 1295 0.1391443749140421 No Hit TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACCTG 1291 0.138714585339018 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCG 1243 0.1335571104387292 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA 1187 0.12754005638839225 Illumina Single End Adapter 1 (100% over 32bp) ATCCGAATTCAGTCTTCCTGAGGCTCTGGCTCACCTCCAGGCAGGTCCCA 1160 0.12463897675697977 No Hit AAGCCATGCATGTCTAAGTACGCACGGCCGGTACAGTGAAACTGCGAATG 1148 0.12334960803190757 No Hit CTGCGCGTCTGCTCCTCCTTCTCACGTTTCTCCTGCCGCCCTAATCCT 1106 0.11883681749415487 No Hit ATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGG 1085 0.11658042222527851 No Hit TTGTCTTTCTAGGTCTCAGCCGGTCGTCGCGACGTTCGCCCGCTCGCT 1063 0.11421657956264614 No Hit ACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTAC 1059 0.11378678998762205 No Hit TCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAA 1023 0.10991868381240544 Illumina Single End Adapter 1 (100% over 31bp) CGGCAAGTTTGAATTTCGTGGAGGCTCGGGTTGTGAGGGTTCCTGCTT 989 0.10626547242470086 No Hit AACTGTGGTAATTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCTT 975 0.10476120891211663 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.1488146403520836 0.0 0.0 0.0 0.0 2 0.21962247283729885 0.0 0.0 0.0 0.0 3 0.26378335167102185 0.0 0.0 0.0 0.0 4 0.33674013203135744 0.0 0.0 0.0 0.0 5 0.39572875120341083 0.0 0.0 0.0 0.0 6 0.4819015609957365 0.0 0.0 0.0 0.0 7 0.542286996286618 0.0 0.0 0.0 0.0 8 0.5936468505019942 0.0 0.0 0.0 0.0 9 0.6369481501856691 0.0 0.0 0.0 0.0 10 0.674124948425251 0.0 0.0 0.0 0.0 11 0.7128060101774172 0.0 0.0 0.0 0.0 12 0.7396678586164214 0.0 0.0 0.0 0.0 13 0.7676041809929859 0.0 0.0 0.0 0.0 14 0.7951107137945262 0.0 0.0 0.0 0.0 15 0.8229395887773346 0.0 0.0 0.0 0.0 16 0.8480822789162427 0.0 0.0 0.0 0.0 17 0.8738696534176867 0.0 0.0 0.0 0.0 18 0.89428465823133 0.0 0.0 0.0 0.0 19 0.9202869275202861 0.0 0.0 0.0 0.0 20 0.9328582725897401 0.0 0.0 0.0 0.0 21 0.9502647503782148 0.0 0.0 0.0 0.0 22 0.9654148328978133 0.0 0.0 0.0 0.0 23 0.9814244945674597 0.0 0.0 0.0 0.0 24 0.9976490510246183 0.0 0.0 0.0 0.0 25 1.0111874226378765 0.0 0.0 0.0 0.0 26 1.0284864530325952 0.0 0.0 0.0 0.0 27 1.045785483427314 0.0 0.0 0.0 0.0 28 1.0572823545592078 0.0 0.0 0.0 0.0 29 1.0744739375601706 0.0 0.0 0.0 0.0 30 1.0875825195984046 0.0 0.0 0.0 0.0 31 1.0990793907302985 0.0 0.0 0.0 0.0 32 1.109716682712144 0.0 0.0 0.0 0.0 33 1.1199241851189659 0.0 0.0 0.0 0.0 34 1.1322806354009076 0.0 0.0 0.0 0.0 35 1.145926454407922 0.0 0.0 0.0 0.0 36 1.1588201416586439 0.0 0.0 0.0 0.0 37 1.172358513271902 0.0 0.0 0.0 0.0 38 1.1823511208912116 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAGCCA 3920 0.0 129.46094 44 ATTAGTC 390 0.0 115.34611 44 CGACGGG 1535 0.0 86.54481 44 TATATTA 110 0.0 63.899128 44 AATGAAG 565 0.0 63.44674 44 TTAAGCC 3885 0.0 63.409714 43 GGTCCCA 355 0.0 61.379154 44 CTATACC 35 0.004028753 60.247746 44 AATCGCA 35 0.004028753 60.247746 44 AATCCCG 280 0.0 58.974934 43 TATTAGT 385 0.0 56.89604 43 CGGGCGC 1310 0.0 56.8751 44 ACTCTCG 25 2.8813112E-4 53.919945 43 AGGTCCC 545 0.0 53.79627 43 ACATTGG 80 7.253402E-7 52.716774 44 ACTAAGT 40 0.0068339715 52.716774 44 GGCGGGC 1530 0.0 51.453415 44 CAATGAA 965 0.0 50.637253 43 GACGGGC 655 0.0 50.43641 44 AATCCTG 635 0.0 49.886562 43 >>END_MODULE