##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841146.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2340958 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 35.96952914148823 38.0 35.0 39.0 31.0 39.0 2 36.86248664008496 39.0 35.0 39.0 33.0 39.0 3 37.0590501837282 39.0 35.0 39.0 34.0 39.0 4 37.443302699151374 39.0 35.0 40.0 34.0 41.0 5 38.00139344661459 40.0 35.0 41.0 34.0 41.0 6 38.0102470868764 40.0 35.0 41.0 35.0 41.0 7 37.960414069795355 40.0 35.0 41.0 34.0 41.0 8 37.94959926662503 40.0 35.0 41.0 34.0 41.0 9 37.915462814796335 40.0 35.0 41.0 34.0 41.0 10 37.83826066080639 39.0 35.0 41.0 34.0 41.0 11 37.80054704099774 39.0 35.0 41.0 34.0 41.0 12 37.739458375588114 39.0 35.0 41.0 34.0 41.0 13 37.674021490347116 39.0 35.0 41.0 34.0 41.0 14 37.63398147254244 39.0 35.0 41.0 34.0 41.0 15 37.58500750547425 39.0 35.0 41.0 34.0 41.0 16 37.514961823321904 39.0 35.0 41.0 34.0 41.0 17 37.38652124472118 38.0 35.0 41.0 34.0 41.0 18 37.29310393437217 38.0 35.0 40.0 34.0 41.0 19 37.15346623049196 38.0 35.0 40.0 33.0 41.0 20 37.03953979524622 37.0 35.0 40.0 33.0 41.0 21 36.70700243233753 37.0 35.0 40.0 33.0 41.0 22 36.568811144838996 37.0 35.0 40.0 33.0 41.0 23 36.41225472648377 36.0 35.0 40.0 33.0 41.0 24 36.25015228808035 36.0 35.0 40.0 32.0 41.0 25 36.13172961664812 36.0 35.0 40.0 32.0 41.0 26 35.97134442764186 35.0 35.0 39.0 32.0 41.0 27 35.89604603586786 35.0 35.0 39.0 32.0 41.0 28 35.975600223830945 35.0 35.0 39.0 33.0 41.0 29 35.97727566804028 35.0 35.0 39.0 33.0 41.0 30 35.94687320533033 35.0 35.0 39.0 33.0 41.0 31 35.83301984027693 35.0 35.0 39.0 33.0 41.0 32 35.78212636158345 35.0 35.0 38.0 33.0 41.0 33 35.73000471441657 35.0 35.0 37.0 33.0 41.0 34 35.70104697746829 35.0 35.0 37.0 33.0 41.0 35 35.58533032018939 35.0 35.0 37.0 33.0 41.0 36 35.490858085204366 35.0 35.0 37.0 33.0 41.0 37 35.44221058162907 35.0 35.0 36.0 33.0 40.0 38 35.34916676955798 35.0 35.0 36.0 33.0 40.0 39 35.23772144804461 35.0 35.0 36.0 33.0 40.0 40 35.10351738364261 35.0 35.0 36.0 33.0 40.0 41 34.969523740064126 35.0 35.0 35.0 33.0 39.0 42 34.92962591932685 35.0 35.0 35.0 33.0 39.0 43 34.87899375742293 35.0 35.0 35.0 33.0 39.0 44 34.8435608960719 35.0 35.0 35.0 33.0 39.0 45 34.78932552161295 35.0 35.0 35.0 33.0 39.0 46 34.704949957157496 35.0 35.0 35.0 33.0 38.0 47 34.67122815993945 35.0 35.0 35.0 33.0 37.0 48 34.60305174096869 35.0 34.0 35.0 33.0 37.0 49 34.58504725394933 35.0 34.0 35.0 32.0 37.0 50 34.88867335849586 35.0 34.0 37.0 32.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 3.0 15 31.0 16 13.0 17 0.0 18 0.0 19 2.0 20 2.0 21 12.0 22 72.0 23 192.0 24 503.0 25 1100.0 26 2434.0 27 4798.0 28 9231.0 29 16263.0 30 28056.0 31 46487.0 32 77986.0 33 153206.0 34 454055.0 35 208984.0 36 302594.0 37 370242.0 38 298404.0 39 236828.0 40 129459.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 47.20687000791983 17.132174092828663 35.6609558992515 2 31.607060015600453 17.408385797609355 28.62499028175644 22.359563905033752 3 33.18572994474911 13.834507069328028 22.30813196990292 30.671631016019933 4 22.946075922763246 16.814910818562314 29.210220772863078 31.028792485811362 5 27.004286279377933 19.713766757028534 28.413495671430244 24.868451292163293 6 29.03260118293451 22.57187014888776 22.588743582755434 25.80678508542229 7 32.649966381284926 20.876794884829202 21.63699647751049 24.83624225637538 8 31.403553587890087 17.443585062183946 25.381916292389693 25.77094505753627 9 26.67331067024697 20.093141354949555 24.707790571210587 28.525757403592888 10 30.82908792041549 18.49136122903529 24.029563964838328 26.64998688571089 11 32.819982246584516 17.428505765588277 25.68704778129296 24.064464206534247 12 28.74784596733474 16.29986526883438 24.89352649641728 30.0587622674136 13 25.24680066878603 16.644339625059484 30.16974247295338 27.93911723320111 14 25.30540915300488 20.580249624299114 22.032133852892706 32.0822073698033 15 24.68250177918613 21.266079955300352 24.843504240571594 29.20791402494193 16 27.132609811880435 22.318469617994 26.61316435408068 23.935756216044883 17 29.36097102126565 20.131459000973106 20.34282545863702 30.16474451912422 18 28.318192808243463 19.93376216061971 20.70336161520198 31.04468341593484 19 28.464372278357835 18.553686140460442 26.616838063732885 26.36510351744884 20 31.514063900334822 17.354262656570516 22.351703875080204 28.77996956801446 21 29.224061260389977 19.049508790845458 23.285723195375567 28.440706753388994 22 30.138473223355568 19.483049247359414 25.68700506373886 24.69147246554616 23 29.73133221527255 18.736175531555883 22.06596615573624 29.466526097435324 24 31.579549910763028 19.63602080857495 21.63772267593011 27.146706604731907 25 28.537444226315 18.899854534241143 26.868560713593943 25.694140525849914 26 30.22129186861062 18.905278480843258 23.647290263563576 27.22613938698254 27 29.20195051917669 19.596182391445666 25.047016167999804 26.154850921377843 28 29.851381539234307 17.804385852826744 24.754204540948287 27.590028066990662 29 33.70060797101579 18.969486432523844 24.691836151541676 22.63806944491869 30 27.494796601055675 20.47606070693067 23.000989468832646 29.028153223181004 31 27.84098395653182 18.648023891889657 30.59998301306846 22.911009138510064 32 29.44381281172458 18.230580060138813 23.315961128308118 29.009645999828493 33 27.65848173557217 20.36211165109242 23.802200122815645 28.17720649051976 34 24.722510736530904 21.758330492119875 27.310208879191293 26.208949892157925 35 27.370502193254076 22.20989336368289 23.698408284120468 26.72119615894256 36 26.528616688330864 20.240460830055536 25.880005238838947 27.350917242774653 37 25.653039632213808 20.79787547393002 23.940505729575353 29.60857916428082 38 29.29374926970818 22.99590185067182 22.071772252080414 25.63857662753958 39 27.542674759909946 23.775516989161513 21.264806740569757 27.41700151035878 40 27.38222540973633 23.69210522423064 20.237088062711955 28.688581303321076 41 26.59720149665517 23.35750347629736 21.81099498395961 28.234300043087856 42 29.14769297829763 21.61026388951309 23.950992430821245 25.29105070136804 43 24.285448223274027 23.692783690121672 24.09983832876012 27.921929757844175 44 26.077655895103803 24.031144130056816 22.15338543023186 27.73781454460752 45 26.486185576192728 21.543029202407844 27.711533751135015 24.259251470264413 46 26.736619456689127 23.029694150450094 23.896430989611943 26.33725540324884 47 31.991247954779066 19.767069870392625 20.423778423929985 27.81790375089832 48 24.512939932787507 24.527306616662027 22.875513220297552 28.08424023025291 49 27.715958221117226 23.565170749150724 20.609071237809918 28.10979979192213 50 26.76916694906342 24.449180270399758 23.121720789464458 25.659931991072366 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1032.0 1 981.0 2 1324.5 3 1651.5 4 1508.5 5 1064.0 6 614.0 7 559.5 8 618.5 9 665.5 10 707.5 11 720.0 12 690.0 13 693.5 14 708.0 15 830.0 16 991.5 17 1230.5 18 1471.5 19 1913.5 20 2397.5 21 3026.0 22 3711.0 23 4482.0 24 5238.0 25 5873.5 26 6986.5 27 8795.0 28 10288.0 29 11632.0 30 13466.0 31 16070.5 32 18987.5 33 21748.0 34 24876.5 35 27905.5 36 32366.0 37 38246.0 38 47718.0 39 64591.5 40 80932.0 41 91561.5 42 109586.0 43 132257.0 44 128365.5 45 109971.5 46 105482.0 47 102384.5 48 103779.0 49 118368.0 50 142840.5 51 163428.5 52 173972.0 53 182072.5 54 181730.5 55 172820.0 56 166075.5 57 172815.0 58 193080.5 59 194370.0 60 171098.0 61 153934.5 62 147597.5 63 143910.5 64 152170.0 65 164393.0 66 144873.5 67 115725.0 68 98318.0 69 86161.5 70 77497.0 71 72621.0 72 72982.0 73 64775.5 74 49822.0 75 41914.0 76 38866.5 77 29474.0 78 21182.0 79 18871.0 80 16513.5 81 11417.0 82 7453.5 83 6566.0 84 5631.0 85 4381.0 86 3175.0 87 1862.5 88 871.0 89 588.0 90 422.5 91 293.0 92 191.5 93 151.5 94 94.5 95 30.0 96 16.5 97 15.0 98 18.5 99 22.0 100 22.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 12575.0 25 11940.0 26 15107.0 27 31766.0 28 43806.0 29 38732.0 30 8887.0 31 9163.0 32 9648.0 33 9431.0 34 10388.0 35 9272.0 36 8358.0 37 8004.0 38 8421.0 39 9783.0 40 11563.0 41 14801.0 42 18237.0 43 16150.0 44 14031.0 45 18211.0 46 36515.0 47 100742.0 48 444805.0 49 736006.0 50 684616.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.50911542142422 #Duplication Level Percentage of deduplicated Percentage of total 1 46.624840523407855 6.298603521362139 2 10.3175367137288 2.7876158866108858 3 6.5795624212405865 2.666522045130135 4 5.356985737007317 2.8947255452862053 5 4.495877430870749 3.036766356710457 6 3.6343902872294587 2.9458438726011527 7 3.0855504383878833 2.917813990756561 8 2.5678940375111146 2.775198155417976 9 2.216266649060015 2.6945821770124345 >10 14.077715751138772 32.847598145426424 >50 0.5990781159113078 5.555769832763341 >100 0.36558176730300906 9.820593748473204 >500 0.037358704435423336 3.5978494161792245 >1k 0.03302242624202599 8.598897955897113 >5k 0.00600407749855018 5.972022679538413 >10k+ 0.0023349190272139585 4.58959667083441 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAA 25464 1.0877597974846196 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCC 14667 0.6265383659168596 No Hit CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGC 13761 0.5878362619064502 No Hit ATCCGAATTCAGTCTTCCTGAGGCTCTGGCTCACCTCCAGGCAGGTCCC 13267 0.5667337901833351 No Hit TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA 12479 0.53307235755618 No Hit CTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGG 11552 0.4934731849097677 No Hit CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC 10663 0.4554972793189797 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAA 9929 0.42414259461297465 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCCG 9456 0.4039371915258625 No Hit CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGC 9300 0.3972732530869841 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAAG 9224 0.39402671897573555 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGAC 8912 0.3806988420979787 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGA 8757 0.37407762121319565 No Hit CTGCGCGTCTGCTCCTCCTTCTCGCGCTTCTGCTGCCGCCCTAATCCT 8613 0.36792629342346167 No Hit TCGCTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAAT 7969 0.34041618858604045 No Hit AGGCCTGGTTTGCGCTGGAGAGTGGTCTTGGTTGTGAGGGTCATAAGAT 6515 0.2783048649313657 No Hit ATCCGAATTCAGTCTTCCTGAGGCTCTGGCTCACCTCCAGGCAGGTCCCA 6507 0.2779631244986027 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA 6452 0.2756136590233571 Illumina Single End Adapter 1 (100% over 32bp) CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCG 6404 0.2735632164267791 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAAT 6129 0.2618158890505511 No Hit CTGCGCGTCTGCTCCTCCTTCTCGCGCTTCTGCTGCCGCCCTAATCCTG 5919 0.2528452026905224 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAA 5885 0.2513928058512797 Illumina Single End Adapter 1 (100% over 32bp) CGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGT 5815 0.24840257706460347 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCG 5583 0.23849210451447656 No Hit ATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGGC 5163 0.2205507317944192 No Hit CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGCC 4689 0.20030261115321163 No Hit CCCTTCCACCTTCTGCCGTGTTAGGATTTGGTGTTCCTCCCTTCCAGA 4625 0.19756868769110766 No Hit TCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA 4493 0.1919299705505182 Illumina Single End Adapter 1 (100% over 31bp) TCGCTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATC 4158 0.17761958992856772 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA 3958 0.16907607910949277 No Hit CTCTGCAGGTACCATGGAGCTGAGCTATAGGCTCTTCATCTGCCTCCT 3829 0.16356551463118946 No Hit CAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGGCGC 3801 0.16236942311651897 No Hit CTCTGCAGGTACCATGGAGCTGAGCTATAGGCTCTTCATCTGCCTCCTG 3584 0.15309971387782267 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTAG 3489 0.14904154623876206 No Hit AGCGAGCGGCCTTGAGAGGCTCTGGCTCTTGCTTCTTAGGCGGCCCGAG 3415 0.14588044723570437 No Hit TCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAA 3245 0.13861846303949069 Illumina Single End Adapter 1 (100% over 31bp) ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGT 3111 0.13289431079071046 No Hit CTGTGCGTCTGCTCCTCCTTCTCGCGCTTCTCCTGCCGCCCTAATCCT 2995 0.127939074515647 No Hit TCGCTGCGCGTCTGCTCCTCCTTCTCGCGCTTCTGCTGCCGCCCTAAT 2976 0.12712744098783488 No Hit ATTAGGCCTGGTTTGCGCTGGAGAGTGGTCTTGGTTGTGAGGGTCATA 2787 0.1190538232638091 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA 2762 0.11798588441142473 Illumina Single End Adapter 1 (100% over 32bp) AGGCCTGGTTTGCGCTGGAGAGTGGTCTTGGTTGTGAGGGTCATAAGATG 2755 0.11768686153275709 No Hit CCCTTCCACCTTCTGCCGTGTTAGGATTTGGTGTTCCTCCCTTCCAGAA 2709 0.11572185404436987 No Hit CGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGTC 2583 0.11033944222835267 No Hit TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTTTCCG 2516 0.10747736610396257 No Hit AGCTGTTTTTCGTCTTCCCTAGGCTATTTCTGCCGGGCGCTCCGCGAAG 2498 0.10670845013024581 No Hit ACCAGCGAGCGGCCTTGAGAGGCTCTGGCTCTTGCTTCTTAGGCGGCCC 2441 0.10427354954680947 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCGC 2353 0.1005144047864165 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.19568911531091118 0.0 0.0 0.0 0.0 2 0.3080362825817464 0.0 0.0 0.0 0.0 3 0.374462079200054 0.0 0.0 0.0 0.0 4 0.460324362931757 0.0 0.0 0.0 0.0 5 0.564427042262185 0.0 0.0 0.0 0.0 6 0.68416434639152 0.0 0.0 0.0 0.0 7 0.7644733480908243 0.0 0.0 0.0 0.0 8 0.8485414945505216 0.0 0.0 0.0 0.0 9 0.9103537953265287 0.0 0.0 0.0 0.0 10 0.974814584456449 0.0 0.0 0.0 0.0 11 1.0300910994558639 0.0 0.0 0.0 0.0 12 1.0750726839182934 0.0 0.0 0.0 0.0 13 1.1191999172988152 0.0 0.0 0.0 0.0 14 1.164437807085817 4.271755409537463E-5 0.0 0.0 0.0 15 1.205489376571472 4.271755409537463E-5 0.0 0.0 0.0 16 1.2435507172704507 4.271755409537463E-5 0.0 0.0 0.0 17 1.2881478437460219 4.271755409537463E-5 0.0 0.0 0.0 18 1.3148035975015357 4.271755409537463E-5 0.0 0.0 0.0 19 1.3520533046727023 4.271755409537463E-5 0.0 0.0 0.0 20 1.3751635014383001 4.271755409537463E-5 0.0 0.0 0.0 21 1.4041687206690594 4.271755409537463E-5 0.0 0.0 0.0 22 1.4232634673496918 4.271755409537463E-5 0.0 0.0 0.0 23 1.444237786410521 4.271755409537463E-5 0.0 0.0 0.0 24 1.4657247161204943 4.271755409537463E-5 0.0 0.0 0.0 25 1.4845204399224592 4.271755409537463E-5 0.0 0.0 0.0 26 1.5103645601501607 4.271755409537463E-5 0.0 0.0 0.0 27 1.5263409253818307 4.271755409537463E-5 0.0 0.0 0.0 28 1.5441114278855066 4.271755409537463E-5 0.0 0.0 0.0 29 1.5645304187430957 4.271755409537463E-5 0.0 0.0 0.0 30 1.5790116695814278 4.271755409537463E-5 0.0 0.0 0.0 31 1.593621073082046 4.271755409537463E-5 0.0 0.0 0.0 32 1.6059237286615138 4.271755409537463E-5 0.0 0.0 0.0 33 1.6186535597819354 4.271755409537463E-5 0.0 0.0 0.0 34 1.6323658946465507 4.271755409537463E-5 0.0 0.0 0.0 35 1.6461209470652614 4.271755409537463E-5 0.0 0.0 0.0 36 1.6591070835102553 4.271755409537463E-5 0.0 0.0 0.0 37 1.670042777358671 4.271755409537463E-5 0.0 0.0 0.0 38 1.6804231430038472 4.271755409537463E-5 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTAGTC 1260 0.0 123.73618 44 TAAGCCA 1870 0.0 96.772285 44 CTATACG 130 0.0 85.66352 44 GGTCCCA 1470 0.0 76.23034 44 AATGAAG 1780 0.0 71.94772 44 CCAGAAT 1345 0.0 68.82538 44 TATTAGT 1275 0.0 59.626003 43 CGCTACC 330 0.0 56.94677 44 CAATGAA 4205 0.0 56.317596 43 CGACGGG 3070 0.0 54.865112 44 AGGTCCC 2680 0.0 53.47026 43 TCGTGCG 1065 0.0 51.16852 43 ATAAGAT 1585 0.0 50.51091 43 TTAAGCC 1770 0.0 50.17278 43 AATCGCA 70 2.1582206E-5 49.715435 44 AATCCTG 1630 0.0 49.529175 43 GACCTTA 340 0.0 47.48974 43 TAAGATG 1310 0.0 46.755276 44 AATCCCG 1375 0.0 46.23774 43 TTTGGAC 1620 0.0 45.88965 43 >>END_MODULE