##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841143.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5632375 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 37.33384602410173 39.0 37.0 39.0 34.0 39.0 2 37.93258385672119 39.0 38.0 39.0 35.0 39.0 3 38.35317517033223 39.0 38.0 39.0 35.0 41.0 4 38.833919438957814 39.0 39.0 41.0 35.0 41.0 5 39.30798251181784 41.0 39.0 41.0 35.0 41.0 6 39.30431141392397 41.0 39.0 41.0 35.0 41.0 7 39.27161082136754 41.0 39.0 41.0 35.0 41.0 8 39.29728116469518 40.0 39.0 41.0 35.0 41.0 9 39.298469828447146 40.0 39.0 41.0 35.0 41.0 10 39.17824612175148 40.0 39.0 41.0 35.0 41.0 11 39.256697574291486 40.0 39.0 41.0 35.0 41.0 12 39.241960451852016 40.0 39.0 41.0 35.0 41.0 13 39.22457133979893 40.0 39.0 41.0 35.0 41.0 14 39.20846605561597 40.0 39.0 41.0 35.0 41.0 15 39.20657573403759 40.0 39.0 41.0 35.0 41.0 16 39.1424257085155 40.0 38.0 41.0 35.0 41.0 17 39.05743669411216 40.0 38.0 41.0 35.0 41.0 18 39.022975032734855 40.0 38.0 41.0 35.0 41.0 19 38.919039126478616 40.0 38.0 41.0 35.0 41.0 20 38.864964424421316 40.0 38.0 41.0 35.0 41.0 21 38.55895443751526 40.0 38.0 41.0 35.0 41.0 22 38.51842215761557 40.0 38.0 41.0 34.0 41.0 23 38.36200075456624 40.0 37.0 41.0 34.0 41.0 24 38.23257595596884 40.0 37.0 41.0 34.0 41.0 25 38.21806151435778 40.0 37.0 41.0 34.0 41.0 26 38.11055517272373 40.0 37.0 41.0 34.0 41.0 27 38.095192886370505 40.0 36.0 41.0 34.0 41.0 28 38.14098570953793 40.0 36.0 41.0 34.0 41.0 29 38.19599889750363 40.0 36.0 41.0 34.0 41.0 30 38.23647164982056 40.0 36.0 41.0 34.0 41.0 31 38.19906345051937 40.0 36.0 41.0 34.0 41.0 32 38.14682502701158 40.0 35.0 41.0 34.0 41.0 33 38.05465214267699 40.0 35.0 41.0 34.0 41.0 34 37.96021469937379 39.0 35.0 41.0 34.0 41.0 35 37.866140705432706 39.0 35.0 41.0 34.0 41.0 36 37.708705740233235 39.0 35.0 41.0 34.0 41.0 37 37.68360345011264 39.0 35.0 41.0 34.0 41.0 38 37.53989903415844 39.0 35.0 41.0 34.0 41.0 39 37.35551256213042 38.0 35.0 41.0 34.0 41.0 40 37.21019809069402 38.0 35.0 41.0 33.0 41.0 41 37.0192441248068 37.0 35.0 41.0 33.0 41.0 42 36.90542074784418 37.0 35.0 41.0 33.0 41.0 43 36.800791767469455 37.0 35.0 40.0 33.0 41.0 44 36.74270340659206 36.0 35.0 40.0 33.0 41.0 45 36.68662968395214 36.0 35.0 40.0 33.0 41.0 46 36.545321395003135 36.0 35.0 40.0 33.0 41.0 47 36.41505468375078 36.0 35.0 40.0 33.0 41.0 48 36.38838188289031 36.0 35.0 40.0 33.0 41.0 49 36.680856839581686 37.0 35.0 40.0 33.0 41.0 50 37.22889849444514 38.0 35.0 40.0 33.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 6.0 14 273.0 15 1459.0 16 1314.0 17 25.0 18 0.0 19 0.0 20 0.0 21 19.0 22 35.0 23 111.0 24 295.0 25 702.0 26 1676.0 27 3975.0 28 8469.0 29 16867.0 30 30846.0 31 51800.0 32 85013.0 33 145518.0 34 323402.0 35 274697.0 36 432554.0 37 660491.0 38 992989.0 39 1228292.0 40 1371545.0 41 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 46.81937903637453 19.25083113251515 33.92978983111033 2 28.546110654919104 22.62367118666637 27.890419228123125 20.939798930291396 3 32.986333473889786 15.082411948778269 22.409835992809427 29.521418584522515 4 23.79241439002197 16.91204864732906 27.022419494440626 32.27311746820835 5 27.010328680174883 20.38605384052021 27.412361570385496 25.19125590891942 6 28.815180097205882 20.943048003728446 22.485736478838856 27.756035420226816 7 32.728396102887324 20.47228744534943 22.08398766062274 24.715328791140504 8 30.936292416609334 17.509736123748862 26.520091435673226 25.033880023968575 9 27.25576688341952 19.977700348432055 24.51857342595264 28.247959342195788 10 29.090215051377083 19.85297498834861 26.0614039370603 24.99540602321401 11 30.764908231429906 21.21213520051488 22.956337246720963 25.06661932133425 12 27.483415078008832 17.487649526176792 25.932950132049093 29.095985263765282 13 25.217798885905147 17.52944361836703 26.596897401185117 30.65586009454271 14 25.3752102798553 20.914285714285715 21.343092389977585 32.367411615881394 15 23.49499101178455 22.36417141969418 24.873148538582747 29.267689029938527 16 28.54923544685856 21.283810115626178 25.349892363345834 24.81706207416942 17 28.776084688963362 20.660325351206197 19.655971060165562 30.907618899664886 18 27.393133447258037 19.48178166404048 19.201260569475576 33.9238243192259 19 26.645757784238445 21.27793337624004 26.272611464968154 25.803697374553362 20 31.986471071262123 17.20031070374398 23.61360882398633 27.199609401007567 21 27.94844093299896 21.023564659668434 22.681142502052865 28.346851905279745 22 29.776355445083112 19.990021971193325 25.592596373643445 24.641026210080117 23 29.483725781752813 18.879122927716992 23.56327481746155 28.073876473068644 24 31.773097494396236 19.66873654541823 21.47916287534122 27.079003084844317 25 26.766943548640487 20.52885123497168 24.712108920874407 27.992096295513424 26 29.78685347344679 20.24474884009732 23.72295885204753 26.245438834408365 27 28.545089529412294 21.08393523385019 24.732927605014908 25.6380476317226 28 28.468168860515437 17.9141391745859 27.154865919107667 26.462826045790997 29 32.13664509453756 19.2801208324035 25.24576169402203 23.337472379036907 30 26.605812535882322 19.767337689914218 23.587504069522307 30.039345704681153 31 26.80961859353412 19.391575761530028 30.91097365136626 22.887831993569595 32 28.586660630573213 19.854641851302656 24.405019821303707 27.153677696820427 33 26.47391357121065 21.13590546297581 23.92693441839364 28.463246547419896 34 24.286558793833148 21.016136748201973 30.23033758264021 24.466966875324665 35 28.171528528365453 21.719189799365118 22.66419549361273 27.4450861786567 36 26.282042761473235 21.579140782904794 24.941045619275112 27.197770836346862 37 24.448454216044638 22.560046678502406 23.705918371871416 29.285580733581547 38 30.503834712989775 24.235405788353777 20.660088559272385 24.600670939384063 39 26.310730410131967 25.048842183194175 22.359813047151096 26.280614359522765 40 26.87110158197595 23.85450382759188 20.870905295212907 28.403489295219263 41 26.918358670095692 23.338538678055556 21.376005172311828 28.367097479536923 42 26.515731827914244 24.59025956731539 24.598406500166156 24.295602104604203 43 24.71815306760165 24.80433653446253 24.777158093076114 25.700352304859702 44 24.655020618092323 23.9418025167586 23.83441235365659 27.56876451149249 45 25.131731317635076 22.805344692820892 27.556854526860892 24.50606946268314 46 26.123874271734635 23.924017091738104 22.648761115629206 27.303347520898047 47 29.648574753120993 20.86647443818551 21.872524821500864 27.61242598719264 48 24.704249788563594 22.639751642390962 23.896497246056054 28.75950132298939 49 27.015179207462207 22.702360591422398 21.271927118617032 29.010533082498362 50 22.174099680467585 30.85491977575875 23.59962929691498 23.37135124685869 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 8247.0 1 8241.0 2 7499.0 3 6476.0 4 6010.0 5 4654.5 6 3053.5 7 2623.5 8 2598.5 9 2481.5 10 2351.0 11 2372.5 12 2397.5 13 2412.0 14 2604.5 15 3158.0 16 3690.5 17 4462.5 18 5148.5 19 6217.0 20 7486.0 21 9290.5 22 11146.0 23 13562.5 24 15961.0 25 18394.5 26 22161.0 27 26426.5 28 30208.5 29 33532.0 30 37463.0 31 45836.5 32 56166.0 33 62586.0 34 68934.0 35 77537.5 36 89081.5 37 101517.5 38 126787.0 39 171562.0 40 210950.0 41 238084.0 42 262842.5 43 309730.0 44 333701.5 45 290452.5 46 263579.0 47 275484.5 48 307875.0 49 333681.0 50 370932.0 51 422559.5 52 436936.0 53 433218.5 54 411079.0 55 382493.0 56 374113.5 57 399910.0 58 444293.0 59 429338.5 60 370965.0 61 339436.0 62 323983.0 63 309842.0 64 339760.5 65 376972.5 66 324723.5 67 263775.5 68 230062.0 69 202234.5 70 182701.5 71 166972.5 72 160128.5 73 139956.0 74 112892.5 75 96540.5 76 88120.5 77 69227.0 78 53144.0 79 46228.5 80 39007.5 81 27128.0 82 18181.0 83 14971.0 84 12128.0 85 9225.5 86 6613.0 87 4240.5 88 2429.0 89 1613.5 90 1048.5 91 627.5 92 405.5 93 343.5 94 241.0 95 103.0 96 49.0 97 45.0 98 33.5 99 21.5 100 21.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 30951.0 25 27465.0 26 32484.0 27 86298.0 28 118198.0 29 90663.0 30 19897.0 31 22170.0 32 22110.0 33 21062.0 34 23436.0 35 21821.0 36 18827.0 37 19038.0 38 20851.0 39 23652.0 40 28340.0 41 33916.0 42 44497.0 43 42639.0 44 37832.0 45 45780.0 46 84879.0 47 209486.0 48 1183314.0 49 1915713.0 50 1407056.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.197355123251391 #Duplication Level Percentage of deduplicated Percentage of total 1 45.0960857002359 5.500529719543562 2 10.566666631512463 2.5777077074713612 3 6.641764334759063 2.430358747080055 4 5.275755499959514 2.5740105350581155 5 4.505223225890087 2.7475903797850805 6 3.8824847114289422 2.8413626871535804 7 3.195039041237438 2.7279718073037973 8 2.741084783851399 2.6747187625261035 9 2.276261732382554 2.4987935433003687 >10 14.646238891174956 31.22079014713361 >50 0.6705734872038205 5.641946482331024 >100 0.4130059123054455 9.654410930308597 >500 0.04490802404750158 3.8747737217707656 >1k 0.03714426392781006 8.81108603903599 >5k 0.003805764746701851 3.38604261056571 >10k+ 0.0039579953365699245 10.837906179632567 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA 87216 1.5484764419982688 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCC 57225 1.016001242814976 No Hit CTGCGCGTCTGCTCCTCCTTCTCGCGCTTCTGCTGCCGCCCTAATCCT 49804 0.8842451008677511 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAA 29277 0.5197984864289044 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGTGCTAATAAAGGGAAGCAGTGGT 26766 0.4752169377926718 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGA 25221 0.4477862358241417 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAA 22180 0.39379480237022574 No Hit TCGCTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAAT 21758 0.3863024035153909 No Hit CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC 21481 0.3813844071106771 No Hit ATCCGAATTCAGTCTTCCTGAGGCTCTGGCTCACCTCCAGGCAGGTCCC 20982 0.3725249117823298 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA 18010 0.3197585388046783 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCCG 17647 0.3133136554295479 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAA 17600 0.3124791939457156 Illumina Single End Adapter 1 (100% over 32bp) ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA 17241 0.30610532856920925 Illumina Single End Adapter 1 (100% over 32bp) CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 15194 0.2697618677733638 No Hit CTGCGCGTCTGCTCCTCCTTCTCGCGCTTCTGCTGCCGCCCTAATCCTG 15126 0.26855456179675535 No Hit ACTACTTCTCCCCCGGACTCCTTGGTAGTCTGTTAGTGGGAGATCCTTG 14177 0.25170554162320513 No Hit TCGCTGCGCGTCTGCTCCTCCTTCTCGCGCTTCTGCTGCCGCCCTAAT 13583 0.24115936882753722 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGAC 13247 0.235193856943119 No Hit CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGC 12657 0.22471870214607514 No Hit CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGC 12490 0.22175370070352204 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCG 11681 0.20739031048181275 No Hit CTCTGCAGGTACCATGGAGCTGAGCTATAGGCTCTTCATCTGCCTCCT 11382 0.2020817150846668 No Hit CTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGG 10963 0.19464257972880003 No Hit AGGCCTGGTTTGCGCTGGAGAGTGGTCTTGGTTGTGAGGGTCATAAGAT 10632 0.18876584034266183 No Hit AGCGAGCGGCCTTGAGAGGCTCTGGCTCTTGCTTCTTAGGCGGCCCGAG 10144 0.18010164451053065 No Hit TCGCTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATC 9795 0.17390532413058435 No Hit AAGCAGTGGTATCAACGCAGAGTGCAG 9237 0.16399831332253267 No Hit TCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA 9099 0.16154819237000376 Illumina Single End Adapter 1 (100% over 31bp) CGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGT 9056 0.1607847488847955 No Hit ACACCCGGGTGAGGGGTCTGCTGGCTGCACCTGTCGGTCTCATGGCTCC 8569 0.1521383075523203 No Hit CTCTCTCCTCCCGCCGCCCAAGATGCCGAAAGGAAAGAAGGCCAAGGGA 8555 0.15188974455713622 No Hit AAGCAGTGGTATCAACGCAGAGTG 8350 0.14825007212765487 No Hit AGCTGTTTTTCGTCTTCCCTAGGCTATTTCTGCCGGGCGCTCCGCGAAG 8307 0.14748662864244658 No Hit ACCAGCGAGCGGCCTTGAGAGGCTCTGGCTCTTGCTTCTTAGGCGGCCC 7722 0.13710024634368273 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTAG 7618 0.13525377837945804 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA 7556 0.13415299940078565 Illumina Single End Adapter 1 (100% over 32bp) ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGT 7197 0.1277791340242793 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 7184 0.12754832552875117 No Hit TCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAA 6949 0.12337601810958965 Illumina Single End Adapter 1 (100% over 31bp) CAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGGCGC 6712 0.1191682016911161 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGGTTGTGAGGGTTCCTGCTT 6599 0.11716194322998735 No Hit TTGTCTTTCTAGGTCTCAGCCGGTCGTCGCGACGTTCGCCCGCTCGCT 6493 0.11527996626645065 No Hit TCTGGAAGAGGTCTTGCGAAAGCCGCCTCGAGCGCGCTCCGCGGCTGC 6317 0.11215517432699348 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAA 6124 0.10872855589338423 Illumina Single End Adapter 1 (100% over 32bp) CTTCCGCCACGGCCGTCTCTGGAGAGCAGCAGCCATGGCCCTACGCTAC 6099 0.10828469340198406 No Hit ATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGGC 6076 0.10787633990989591 No Hit CTGCGCGTCTGCTCCCCCTTCTCACGTTTCTCCTGCTGCCCTAATCCT 6024 0.10695310592778358 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAA 5989 0.10633169843982335 Illumina Single End Adapter 1 (100% over 32bp) ATTCCTGCTCACCGCAGTGTAGACAGGGAAACTTTCTTTGCAGTTCAGG 5708 0.1013426840364855 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.32471204420870414 0.0 0.0 0.0 0.0 2 0.5549346412481413 0.0 0.0 0.0 0.0 3 0.6374398011496039 0.0 0.0 0.0 0.0 4 0.7388002396857454 0.0 0.0 0.0 0.0 5 0.8589449388579418 0.0 0.0 0.0 0.0 6 0.9738875696309284 0.0 0.0 0.0 0.0 7 1.0629796489047694 0.0 0.0 0.0 0.0 8 1.162600146474622 0.0 0.0 0.0 0.0 9 1.235482367562529 0.0 0.0 0.0 0.0 10 1.3014935972835615 0.0 0.0 0.0 0.0 11 1.3744113273707805 0.0 0.0 0.0 0.0 12 1.427124436849464 0.0 0.0 0.0 0.0 13 1.4812934152999402 0.0 0.0 0.0 0.0 14 1.540753234647906 0.0 0.0 0.0 0.0 15 1.6105639272953238 0.0 0.0 0.0 0.0 16 1.6553407754277725 0.0 0.0 0.0 0.0 17 1.7394971037972435 0.0 0.0 0.0 0.0 18 1.7827115559599636 0.0 0.0 0.0 0.0 19 1.8697618677733638 0.0 0.0 0.0 0.0 20 1.9013471226613996 0.0 0.0 0.0 0.0 21 1.9466921147828402 0.0 0.0 0.0 0.0 22 1.9689740118511285 0.0 0.0 0.0 0.0 23 2.0001154042477642 0.0 0.0 0.0 0.0 24 2.028806675691871 0.0 0.0 0.0 0.0 25 2.0526332142302315 0.0 0.0 0.0 0.0 26 2.100321800306265 0.0 0.0 0.0 0.0 27 2.119230342439912 0.0 0.0 0.0 0.0 28 2.140784305022304 0.0 0.0 0.0 0.0 29 2.164717370558601 0.0 0.0 0.0 0.0 30 2.1821700437204554 0.0 0.0 0.0 0.0 31 2.197279122927717 0.0 0.0 0.0 0.0 32 2.211660267649082 0.0 0.0 0.0 0.0 33 2.2262367118666635 0.0 0.0 0.0 0.0 34 2.2410439645797733 0.0 0.0 0.0 0.0 35 2.255797953793915 0.0 0.0 0.0 0.0 36 2.2705519430080563 0.0 0.0 0.0 0.0 37 2.2835659912559088 0.0 0.0 0.0 0.0 38 2.294680308040569 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAGCCA 10075 0.0 145.75381 44 ATTAGTC 2590 0.0 141.51039 44 AATCGCA 445 0.0 108.84877 44 CTATCAT 1410 0.0 83.0197 44 CGACGGG 3055 0.0 66.06342 44 TTAAGCC 10030 0.0 63.824467 43 ACATTGG 810 0.0 61.79295 44 TATTAGT 2710 0.0 60.449303 43 ACTTCTA 1245 0.0 59.655537 44 CCCATAC 745 0.0 57.431725 44 AGGTCCC 3505 0.0 49.18786 43 ATTAAGC 9990 0.0 47.526722 42 CAATGAA 3860 0.0 46.888412 43 ATCCTTG 2440 0.0 46.447926 43 TAATCCT 9505 0.0 45.18053 42 AATCCTG 3355 0.0 45.142776 43 TAATCGC 470 0.0 44.573242 43 GATTAAG 10400 0.0 44.4175 41 ATAAGAT 1715 0.0 44.255817 43 AGATTAA 10210 0.0 44.18992 40 >>END_MODULE