##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841141.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2831172 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 37.132109246630016 39.0 37.0 39.0 33.0 39.0 2 37.80228965248314 39.0 37.0 39.0 35.0 39.0 3 38.09773267042765 39.0 38.0 39.0 35.0 40.0 4 38.39799030224938 39.0 38.0 40.0 35.0 41.0 5 38.97321603915269 40.0 38.0 41.0 35.0 41.0 6 38.96074346595685 40.0 38.0 41.0 35.0 41.0 7 38.9577224555767 40.0 38.0 41.0 35.0 41.0 8 38.931831764371786 40.0 38.0 41.0 35.0 41.0 9 38.91641164860348 40.0 38.0 41.0 35.0 41.0 10 38.893887054548436 40.0 38.0 41.0 35.0 41.0 11 38.933869083192405 40.0 38.0 41.0 35.0 41.0 12 38.87159204739239 40.0 38.0 41.0 35.0 41.0 13 38.845359448313275 40.0 38.0 41.0 35.0 41.0 14 38.81994417859459 40.0 38.0 41.0 35.0 41.0 15 38.80151824050252 40.0 38.0 41.0 35.0 41.0 16 38.72747152062821 40.0 38.0 41.0 35.0 41.0 17 38.64271828062724 40.0 38.0 41.0 35.0 41.0 18 38.556959096798074 40.0 38.0 41.0 35.0 41.0 19 38.44879081878459 40.0 37.0 41.0 35.0 41.0 20 38.38673347998638 40.0 37.0 41.0 34.0 41.0 21 38.088091786722956 40.0 37.0 41.0 34.0 41.0 22 37.983444665318814 40.0 36.0 41.0 33.0 41.0 23 37.86618333326269 39.0 36.0 41.0 33.0 41.0 24 37.733851210735345 39.0 36.0 41.0 33.0 41.0 25 37.66172398845624 39.0 35.0 41.0 33.0 41.0 26 37.517638783314716 39.0 35.0 40.0 33.0 41.0 27 37.46760014346084 39.0 35.0 40.0 33.0 41.0 28 37.56013868575172 39.0 35.0 40.0 33.0 41.0 29 37.607273469160646 39.0 35.0 41.0 33.0 41.0 30 37.64215987899804 39.0 35.0 41.0 33.0 41.0 31 37.5738407879476 39.0 35.0 41.0 33.0 41.0 32 37.54096940330836 39.0 35.0 41.0 33.0 41.0 33 37.462980086358186 39.0 35.0 41.0 33.0 41.0 34 37.39438647910243 38.0 35.0 41.0 33.0 41.0 35 37.26500374992163 38.0 35.0 41.0 33.0 41.0 36 37.15239576314458 37.0 35.0 41.0 33.0 41.0 37 37.05715568625172 37.0 35.0 41.0 33.0 41.0 38 36.95391493729701 37.0 35.0 40.0 33.0 41.0 39 36.807942169864425 37.0 35.0 40.0 33.0 41.0 40 36.65262699933596 36.0 35.0 40.0 33.0 41.0 41 36.5014231474587 36.0 35.0 40.0 33.0 41.0 42 36.4120608609155 36.0 35.0 40.0 33.0 41.0 43 36.320729105913536 36.0 35.0 40.0 33.0 41.0 44 36.24036706016527 35.0 35.0 40.0 33.0 41.0 45 36.149428990551215 35.0 35.0 39.0 33.0 41.0 46 36.03141178174254 35.0 35.0 39.0 33.0 41.0 47 35.96787233224123 35.0 35.0 39.0 33.0 41.0 48 35.90285603204627 35.0 35.0 39.0 33.0 41.0 49 36.157543536378896 36.0 35.0 39.0 33.0 41.0 50 36.474939868007276 37.0 35.0 40.0 33.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 30.0 14 220.0 15 1422.0 16 292.0 17 3.0 18 0.0 19 0.0 20 0.0 21 12.0 22 16.0 23 64.0 24 164.0 25 459.0 26 1103.0 27 2571.0 28 5199.0 29 10313.0 30 19006.0 31 32840.0 32 54845.0 33 94751.0 34 186408.0 35 196352.0 36 287847.0 37 420086.0 38 505506.0 39 555953.0 40 455710.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 47.972571076571825 15.606858219846764 36.42057070358141 2 29.938166949941582 21.31368210762186 28.021999369872262 20.726151572564294 3 32.71609778565202 14.357905489316792 23.154651148005136 29.771345577026054 4 23.778703660533516 16.737626678986654 28.561528582509293 30.92214107797054 5 25.931275104444378 19.808086545077444 28.883656662329237 25.376981688148938 6 28.50278965742809 22.983661889846324 23.582601127730847 24.930947324994737 7 33.82680388192593 20.627747095549122 22.045711104800414 23.499737917724534 8 30.626786362679486 17.67480040068212 25.220332780911935 26.47808045572646 9 25.895600832446775 20.26464658452401 26.160932645561623 27.67881993746759 10 30.473281029905635 18.405522518589475 25.183280987520362 25.937915463984528 11 30.965374057104267 19.12264602786408 25.259574480109297 24.652405434922358 12 28.70397842307002 17.32148382366031 26.236872927536727 27.73766482573295 13 25.445822436785896 17.069256124318834 28.857448434782484 28.627473004112787 14 24.471490958514707 21.325726589553724 22.675944803070955 31.52683764886061 15 23.9484566815439 21.16981942460578 26.17220006414305 28.709523829707273 16 28.614227606093873 23.242423985543795 24.802060772005376 23.34128763635696 17 28.562941424964645 20.863020685426388 20.616620961213236 29.95741692839573 18 28.210649158722962 20.167407702534497 21.226333122819806 30.395610015922735 19 27.40970877078468 19.81338470428501 26.500014834845782 26.27689169008453 20 31.34020116050879 17.9207056300359 22.788477704639636 27.950615504815673 21 28.435538356553398 19.438275032389413 23.80145042406466 28.324736186992528 22 28.86483053661169 20.91056283404894 25.299451958411566 24.9251546709278 23 29.781306116336275 19.71939535994281 22.60657423851324 27.89272428520768 24 30.33658852235046 20.16846733437601 21.796521016737945 27.69842312653558 25 27.651140903428374 20.387899710269853 26.291386661052652 25.669572725249125 26 29.567857923781848 19.824873111837437 24.272495383371865 26.334773581008847 27 28.46936683720892 20.989585446263394 24.901765580813585 25.639282135714105 28 29.06184515922054 18.679291745309698 25.602376222930218 26.656486872539542 29 32.20991718676101 20.184841375089256 24.2987582650951 23.30648317305463 30 27.508623511724338 21.051447052547346 22.64278049904217 28.797148936686146 31 27.213286798437743 20.314940075921083 29.205530306028326 23.266242819612845 32 28.801398461417392 19.380043961685946 24.24115666450449 27.577400912392168 33 28.257826833960394 20.562517601216104 23.55424474188848 27.625410822935027 34 24.673742701683178 21.547736269764588 27.882844775645623 25.895676252906615 35 27.285923591380058 22.340477404883956 23.221457446322717 27.152141557413273 36 27.58016769914565 21.040926891783613 25.248171886572646 26.130733522498094 37 25.651028510548823 21.19957852309092 23.619442709530084 29.52995025683018 38 28.723769644006175 23.309549237933773 22.36754553853372 25.599135579526333 39 27.234671350355207 24.180695194397185 21.727301459511985 26.857331995735624 40 27.013548543486177 24.484102826488787 21.045841120646706 27.456507509378337 41 27.07486965556063 22.91344764265293 22.425828728021546 27.585853973764895 42 28.443695912480816 22.758284425388002 23.91795036307391 24.880069299057272 43 25.157433932413642 23.55031555118055 24.471545728492938 26.82070478791287 44 25.884926362786597 23.403690041682665 24.095147606527316 26.61623598900342 45 26.811445555391973 22.3870858025147 26.23548109121266 24.565987550880667 46 26.564253578328284 23.73623055327916 23.8116395638537 25.88787630453886 47 31.512333445387146 20.170104377290205 21.45955944454758 26.85800273277507 48 24.876178910444306 24.260415256051267 23.04155618362827 27.821849649876157 49 27.80189795261577 23.53523069712856 20.78059939355164 27.882271956704024 50 26.2765580792019 27.169007715067828 22.87804302348777 23.676391182242497 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 856.0 1 1045.5 2 2061.0 3 2809.5 4 2616.0 5 1880.0 6 1133.5 7 1085.0 8 1188.0 9 1206.0 10 1150.5 11 1065.5 12 1023.0 13 1087.5 14 1169.5 15 1319.5 16 1538.5 17 2045.0 18 2558.5 19 3327.5 20 4053.5 21 4758.0 22 5635.5 23 7262.5 24 8851.0 25 9973.0 26 11606.0 27 14091.0 28 16513.0 29 18588.0 30 21071.0 31 24886.5 32 29076.0 33 33181.0 34 37589.5 35 41829.5 36 47048.5 37 53226.5 38 64583.0 39 83361.5 40 99014.5 41 112394.5 42 135749.0 43 168808.0 44 173988.5 45 147232.0 46 134783.0 47 134281.0 48 140103.0 49 155998.5 50 180985.0 51 200462.0 52 203615.0 53 205196.0 54 202691.5 55 193559.0 56 188642.0 57 195521.0 58 210086.5 59 212702.0 60 199696.5 61 186203.5 62 176799.0 63 169735.5 64 171286.5 65 175385.5 66 158138.0 67 134218.0 68 115946.5 69 102509.0 70 91334.0 71 83563.0 72 81450.5 73 72013.0 74 58143.5 75 50320.0 76 45996.0 77 35032.0 78 26218.0 79 24292.5 80 21658.0 81 15005.0 82 9838.0 83 8609.0 84 7322.0 85 5848.0 86 4443.5 87 2700.0 88 1291.0 89 858.5 90 602.0 91 367.0 92 221.0 93 177.0 94 126.5 95 75.0 96 63.5 97 63.0 98 55.5 99 47.5 100 47.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 14413.0 25 13306.0 26 18024.0 27 36192.0 28 53412.0 29 56529.0 30 11304.0 31 10258.0 32 11380.0 33 10550.0 34 11750.0 35 10636.0 36 10051.0 37 9980.0 38 9523.0 39 10898.0 40 12145.0 41 14582.0 42 18370.0 43 18737.0 44 17071.0 45 21317.0 46 39036.0 47 102518.0 48 477659.0 49 854054.0 50 957477.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.378723832120414 #Duplication Level Percentage of deduplicated Percentage of total 1 43.84693537105006 5.86616039214111 2 10.206050958782264 2.730878743881914 3 6.864291632151367 2.755063861490648 4 5.630384947867306 3.013094611441775 5 4.566161125411848 3.0544704334924635 6 3.958522557292906 3.1775988046344508 7 3.269968167453194 3.0623600736526817 8 2.7665063352006496 2.9609859390768833 9 2.3704414598230947 2.854213348606339 >10 15.47874962465253 35.896351190473155 >50 0.6144796779974551 5.5990217458253095 >100 0.3577979980900158 9.45544962740326 >500 0.034155171067193915 3.1868698416866326 >1k 0.02939584395127345 7.884866953313292 >5k 0.0036394854415862372 3.3753815172253154 >10k+ 0.0025196437672520104 5.127232915654735 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA 33147 1.1707872216876969 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAA 22178 0.7833504993691658 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAA 14597 0.5155815330188346 No Hit CTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGG 12630 0.44610500527696656 No Hit CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGC 12152 0.42922153793552636 No Hit ATCCGAATTCAGTCTTCCTGAGGCTCTGGCTCACCTCCAGGCAGGTCCC 10903 0.3851055322672024 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCC 10489 0.3704826128543232 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAAG 10401 0.3673743594525518 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGAC 10393 0.3670917909614817 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGA 9696 0.34247301117699663 No Hit CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGC 9019 0.318560652620187 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA 8622 0.3045381912508318 No Hit CTGCGCGTCTGCTCCTCCTTCTCGCGCTTCTGCTGCCGCCCTAATCCT 8296 0.293023525239724 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTAG 6804 0.24032450165514496 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAA 6696 0.2365098270256982 Illumina Single End Adapter 1 (100% over 32bp) CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCCG 6314 0.2230171815770995 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA 6226 0.2199089281753281 Illumina Single End Adapter 1 (100% over 32bp) CGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGT 6177 0.21817819616752354 No Hit ATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGGC 5744 0.2028841765883528 No Hit CTGCGCGTCTGCTCCTCCTTCTCACGTTTCTCCTGCCGCCCTAATCCT 5601 0.19783326481047422 No Hit CTGCGCGTCTGCTCCTCCTTCTCGCGCTTCTGCTGCCGCCCTAATCCTG 5474 0.19334749001473595 No Hit CAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGGCGC 5449 0.1924644634801418 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAAT 4868 0.17194292681617365 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCG 4866 0.17187228469340612 No Hit CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCG 4755 0.16795164687980807 No Hit AGGCCTGGTTTGCGCTGGAGAGTGGTCTTGGTTGTGAGGGTCATAAGAT 4330 0.15294019579170745 No Hit ATCCGAATTCAGTCTTCCTGAGGCTCTGGCTCACCTCCAGGCAGGTCCCA 4153 0.14668836792678083 No Hit TCGCTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATC 3789 0.13383150158308998 No Hit TCGCTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAAT 3779 0.13347829096925232 No Hit CTGTGCGTCTGCTCCTCCTTCTCGCGCTTCTCCTGCCGCCCTAATCCT 3519 0.12429481500947312 No Hit CTGCGCGTCTGCTCCTCCTTCTCACGTTTCTCCTGCCGCCCTAATCCTG 3497 0.12351775165903026 No Hit AACTGTGGTAATTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCTT 3477 0.12281133043135492 No Hit CAACTTTCGATGGTAGTCGCCGTGCCTACCATGGTGACCACGGGTGACGG 3451 0.121892982835377 No Hit ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGT 3283 0.11595904452290429 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGGTTGTGAGGGTTCCTGCTT 3222 0.11380445977849456 No Hit TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACCTG 3179 0.11228565413899261 No Hit CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGCC 3151 0.11129666442024717 No Hit ACTACTTCTCCCCCGGACTCCTTGGTAGTCTGTTAGTGGGAGATCCTTG 3147 0.11115538017471209 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA 3019 0.10663428431759003 Illumina Single End Adapter 1 (100% over 32bp) TCTGGAAGAGGTCTTGCGAAAGCCGCCTCGAGCGCGCTCCGCGGCTGC 2988 0.10553933141469328 No Hit CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC 2986 0.10546868929192574 No Hit CTCTGCAGGTACCATGGAGCTGAGCTATAGGCTCTTCATCTGCCTCCT 2948 0.10412648895934264 No Hit CTGTGCGTCTGCTCCTCCTTCTCGCGCTTCTCCTGCCGCCCTAATCCTG 2866 0.1012301619258738 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.16152321370796263 0.0 0.0 0.0 0.0 2 0.23926486981363196 0.0 0.0 0.0 0.0 3 0.2918932512754435 0.0 0.0 0.0 0.0 4 0.3653963800150609 3.5321061383766156E-5 0.0 0.0 0.0 5 0.44133666199015814 3.5321061383766156E-5 0.0 0.0 0.0 6 0.5370920594015481 3.5321061383766156E-5 0.0 0.0 0.0 7 0.6106305092025494 3.5321061383766156E-5 0.0 0.0 0.0 8 0.6775285994634024 3.5321061383766156E-5 0.0 0.0 0.0 9 0.728355606794642 3.5321061383766156E-5 0.0 0.0 0.0 10 0.7749794078212132 3.5321061383766156E-5 0.0 0.0 0.0 11 0.8240050410218807 3.5321061383766156E-5 0.0 0.0 0.0 12 0.862928850666791 3.5321061383766156E-5 0.0 0.0 0.0 13 0.8974728487001143 3.5321061383766156E-5 0.0 0.0 0.0 14 0.9374209691251538 3.5321061383766156E-5 0.0 0.0 0.0 15 0.9759915681562265 3.5321061383766156E-5 0.0 0.0 0.0 16 1.0048488753067635 3.5321061383766156E-5 0.0 0.0 0.0 17 1.0462098381871536 3.5321061383766156E-5 0.0 0.0 0.0 18 1.0722414604269892 3.5321061383766156E-5 0.0 0.0 0.0 19 1.1102822435373054 3.5321061383766156E-5 0.0 0.0 0.0 20 1.1290024060707016 3.5321061383766156E-5 0.0 0.0 0.0 21 1.1519964170315333 3.5321061383766156E-5 0.0 0.0 0.0 22 1.1687386001274385 3.5321061383766156E-5 0.0 0.0 0.0 23 1.1867876624945428 3.5321061383766156E-5 0.0 0.0 0.0 24 1.207309199158511 3.5321061383766156E-5 0.0 0.0 0.0 25 1.2221793660010767 3.5321061383766156E-5 0.0 0.0 0.0 26 1.2453146612074435 3.5321061383766156E-5 0.0 0.0 0.0 27 1.25944308576095 3.5321061383766156E-5 0.0 0.0 0.0 28 1.2742426104807478 3.5321061383766156E-5 0.0 0.0 0.0 29 1.290525619778664 3.5321061383766156E-5 0.0 0.0 0.0 30 1.302322854280842 3.5321061383766156E-5 0.0 0.0 0.0 31 1.3143320151513225 3.5321061383766156E-5 0.0 0.0 0.0 32 1.3253521863030575 3.5321061383766156E-5 0.0 0.0 0.0 33 1.3361251100251061 3.5321061383766156E-5 0.0 0.0 0.0 34 1.348381518325273 3.5321061383766156E-5 0.0 0.0 0.0 35 1.3596489369066944 3.5321061383766156E-5 0.0 0.0 0.0 36 1.3708810344267321 3.5321061383766156E-5 0.0 0.0 0.0 37 1.382536984683375 3.5321061383766156E-5 0.0 0.0 0.0 38 1.392356239748062 3.5321061383766156E-5 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAGCCA 4070 0.0 106.21454 44 ATTAGTC 555 0.0 92.339 44 AATGAAG 2025 0.0 65.204605 44 CGACGGG 2765 0.0 65.19815 44 TTAAGCC 3975 0.0 58.15849 43 CAATGAA 4000 0.0 55.390213 43 AATCCCG 890 0.0 49.7169 43 AGGTCCC 2150 0.0 49.065067 43 TATTAGT 570 0.0 48.37696 43 AATCCTG 1910 0.0 46.5009 43 ATTAAGC 3985 0.0 45.913265 42 TAATCCT 3740 0.0 45.808414 42 GCAATGA 4025 0.0 43.822292 42 CTAATCC 5860 0.0 43.727867 41 TCGTGCG 1140 0.0 43.032993 43 AGATTAA 4065 0.0 42.783234 40 GATTAAG 4195 0.0 42.510426 41 TGTGTTA 1925 0.0 42.461956 42 ATAAGAT 1210 0.0 41.60344 43 AAGATTA 4195 0.0 41.292812 39 >>END_MODULE