##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841133.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6206994 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 37.46288122720918 39.0 37.0 39.0 35.0 39.0 2 37.94454239846212 39.0 38.0 39.0 35.0 39.0 3 38.00464991588521 39.0 38.0 39.0 35.0 39.0 4 38.360844879179844 39.0 38.0 40.0 35.0 41.0 5 39.25239705403292 40.0 39.0 41.0 36.0 41.0 6 39.169650880925616 40.0 38.0 41.0 36.0 41.0 7 39.213541691839886 40.0 38.0 41.0 36.0 41.0 8 39.16463911516589 40.0 38.0 41.0 36.0 41.0 9 39.06903583280409 40.0 38.0 41.0 35.0 41.0 10 39.085719109765535 40.0 38.0 41.0 35.0 41.0 11 38.967627324917665 40.0 38.0 41.0 35.0 41.0 12 38.846665229578115 40.0 38.0 41.0 35.0 41.0 13 38.73996978247442 40.0 38.0 41.0 35.0 41.0 14 38.69942906340815 40.0 38.0 41.0 35.0 41.0 15 38.638461709484496 40.0 38.0 41.0 35.0 41.0 16 38.66097921151527 40.0 38.0 41.0 35.0 41.0 17 38.781558835081846 40.0 38.0 41.0 35.0 41.0 18 38.80540242184864 40.0 38.0 41.0 35.0 41.0 19 38.78552242840899 40.0 38.0 41.0 35.0 41.0 20 38.806177031909485 40.0 38.0 41.0 35.0 41.0 21 38.86740618727841 40.0 38.0 41.0 35.0 41.0 22 38.85519222348209 40.0 38.0 41.0 35.0 41.0 23 38.82981407747454 40.0 38.0 41.0 35.0 41.0 24 38.71971553379945 40.0 38.0 41.0 35.0 41.0 25 38.67726209882238 40.0 38.0 41.0 35.0 41.0 26 38.65173118877864 40.0 38.0 41.0 35.0 41.0 27 38.57097417791248 40.0 37.0 41.0 35.0 41.0 28 38.50465798095218 40.0 37.0 41.0 34.0 41.0 29 38.477574639632266 40.0 37.0 41.0 34.0 41.0 30 38.51580845397012 40.0 37.0 41.0 35.0 41.0 31 38.47715098681546 40.0 37.0 41.0 34.0 41.0 32 38.31073760081165 40.0 37.0 41.0 34.0 41.0 33 38.162265444860545 40.0 37.0 41.0 34.0 41.0 34 38.188444400715305 40.0 36.0 41.0 34.0 41.0 35 38.196790197784175 40.0 36.0 41.0 34.0 41.0 36 38.17238501508564 40.0 36.0 41.0 34.0 41.0 37 38.14561944033949 40.0 36.0 41.0 34.0 41.0 38 38.06413788678775 40.0 36.0 41.0 34.0 41.0 39 38.01951067695208 39.0 36.0 41.0 34.0 41.0 40 37.91043658918014 39.0 35.0 41.0 34.0 41.0 41 37.792430688012736 39.0 35.0 41.0 34.0 41.0 42 37.70604119761817 39.0 35.0 41.0 34.0 41.0 43 37.61918757620009 39.0 35.0 41.0 34.0 41.0 44 37.43073369297925 39.0 35.0 41.0 34.0 41.0 45 37.24391191422292 38.0 35.0 40.0 33.0 41.0 46 36.9177569422111 37.0 35.0 40.0 33.0 41.0 47 36.69149603810425 37.0 35.0 40.0 32.0 41.0 48 36.574599831365745 37.0 35.0 40.0 32.0 41.0 49 36.73237032776327 37.0 35.0 40.0 33.0 41.0 50 36.17348498006514 37.0 34.0 39.0 31.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 10.0 21 30.0 22 79.0 23 186.0 24 395.0 25 824.0 26 1730.0 27 3666.0 28 7636.0 29 15328.0 30 30337.0 31 54964.0 32 92150.0 33 155357.0 34 267188.0 35 307956.0 36 509215.0 37 751479.0 38 935090.0 39 1394563.0 40 1678809.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 52.00644627657124 18.300871565205316 29.692682158223448 2 23.058601313292716 24.354993737709428 32.009407452303 20.576997496694858 3 23.7452460885253 24.75099863154371 26.166015304670825 25.337739975260163 4 19.20319239876823 26.13255305225041 31.08491807789729 23.57933647108407 5 16.9771551253312 27.28876489972441 30.334023200280203 25.400056774664193 6 20.74624206177741 27.917700580989766 28.69274563500464 22.643311722228184 7 21.35120478608486 26.68990819066363 24.865015174817312 27.093871848434205 8 18.865347702929952 28.19922171666349 26.16865748541081 26.766773094995745 9 21.877208194498014 27.798560784817898 27.17511890618873 23.149112114495356 10 24.78189925751499 24.59374054494011 26.93413268967233 23.69022750787257 11 22.569443437515808 26.357541186603374 27.260651452216646 23.812363923664176 12 21.49802303659388 28.3352940247727 27.312657302391464 22.854025636241957 13 20.794397416849446 28.17636040891936 25.739254782588798 25.289987391642395 14 17.629209888071422 30.50471774259811 24.763275105469734 27.102797263860733 15 19.263253678028367 31.55293850775432 27.14204331436441 22.04176449985291 16 21.208365917543983 32.54510959733488 23.743409450693846 22.503115034427292 17 20.516243450533384 35.03969876561827 20.878786091947248 23.565271691901106 18 18.83368986662465 31.687029180308535 23.251883278765856 26.227397674300956 19 21.372068347415834 29.09952869295508 24.85035429388203 24.67804866574706 20 22.19612263198579 27.617893621292367 27.082030367678783 23.10395337904306 21 19.455826765742003 32.0981299482487 24.28829478488299 24.15774850112631 22 21.611379034682486 30.114657755428798 24.114120297200223 24.159842912688493 23 24.095173927991553 29.41214378489813 26.24060857800088 20.252073709109432 24 19.24433953053604 31.570982668905433 26.617586548335638 22.567091252222895 25 21.2336146932598 30.610088658180086 25.11555237078349 23.040744277776625 26 21.712133168919213 32.854677669765564 25.163965926770526 20.269223234544697 27 23.098732573189118 31.402737733831344 24.124754914633556 21.373774778345986 28 22.51931967716321 29.17486485000884 24.27035892314447 24.035456549683474 29 20.799679483697307 31.94392235001163 25.354233527950825 21.902164638340242 30 22.88635159125972 30.716186942157535 25.97443435311128 20.423027113471466 31 22.91297565172292 30.086556072912106 24.22644380933842 22.774024466026553 32 20.23817880475244 30.553306940101383 27.046826950973113 22.161687304173068 33 18.88708337732168 26.96426307276141 30.214042423686188 23.934611126230724 34 20.301757124125388 29.219317016719828 27.351583422148284 23.127342437006504 35 18.983915521689994 27.498189656294013 27.50323348862277 26.014661333393217 36 19.43552087703307 28.27832346855989 29.41458078216308 22.87157487224395 37 17.708255466939608 29.399211656671014 27.04958124651398 25.842951629875394 38 19.579378067260834 29.2053744328589 25.624196333609543 25.591051166270727 39 20.085517907306873 29.770486201731362 28.002471661946 22.141524229015765 40 17.617641014214875 28.02625152658492 30.247233488626772 24.108873970573434 41 18.05694068719552 30.261104753978984 26.347339764163095 25.334614794662397 42 18.163064594731075 28.844139549140113 27.71853341536399 25.27426244076483 43 18.476578721698495 26.320681421580787 28.314447482073447 26.888292374647264 44 18.426904048153705 27.939235605281915 25.884147177965378 27.749713168599005 45 18.497787368442005 26.375861839320315 28.893232585429928 26.233118206807752 46 18.43055229297425 29.95280828090612 27.412873253635983 24.203766172483647 47 20.161564427441657 29.244445877023313 27.054308076032413 23.539681619502613 48 20.084418442598498 30.49375614226067 24.50670540676541 24.91512000837543 49 18.760036717423024 30.545484958196827 24.829767843064584 25.864710481315562 50 17.850040689357733 30.502316788929896 26.969465743203642 24.678176778508735 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 174552.0 1 172839.5 2 120663.5 3 69168.5 4 64865.5 5 45094.5 6 19588.5 7 11362.0 8 12299.0 9 12366.0 10 11976.5 11 11180.0 12 10103.0 13 10320.5 14 13039.0 15 15312.0 16 15569.0 17 15178.0 18 15574.0 19 17867.0 20 20389.0 21 22437.5 22 24629.0 23 32091.0 24 41979.0 25 50754.0 26 63273.0 27 79507.5 28 93847.5 29 105707.0 30 122465.0 31 158847.5 32 208612.0 33 223335.5 34 244486.0 35 306254.0 36 326939.5 37 323389.5 38 337033.0 39 350715.0 40 372547.5 41 403568.0 42 422662.5 43 445044.0 44 480255.5 45 493903.0 46 507831.5 47 527761.0 48 553015.5 49 610292.0 50 681575.0 51 679188.5 52 615979.5 53 538978.0 54 441263.0 55 363296.5 56 308446.5 57 260193.5 58 222494.0 59 185704.0 60 137474.0 61 92499.5 62 64642.5 63 47553.0 64 35697.0 65 30246.0 66 20197.0 67 10330.5 68 6666.5 69 5024.0 70 3379.5 71 2417.0 72 1744.5 73 1183.5 74 709.0 75 439.5 76 284.0 77 181.5 78 91.0 79 56.0 80 44.5 81 26.5 82 11.0 83 10.5 84 9.5 85 10.5 86 9.0 87 5.0 88 3.0 89 3.0 90 1.5 91 0.0 92 0.0 93 0.0 94 0.5 95 1.0 96 1.0 97 1.0 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 33170.0 25 38098.0 26 43461.0 27 52309.0 28 57109.0 29 48712.0 30 57251.0 31 93078.0 32 128899.0 33 24286.0 34 19808.0 35 21058.0 36 24667.0 37 31853.0 38 19536.0 39 20228.0 40 23674.0 41 27929.0 42 33410.0 43 50781.0 44 132225.0 45 380958.0 46 687267.0 47 603975.0 48 1114083.0 49 901912.0 50 1537257.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.932944941755444 #Duplication Level Percentage of deduplicated Percentage of total 1 71.54611676893829 7.822097554312083 2 11.583379326987682 2.5328089684284913 3 4.70708815021657 1.5438700674692167 4 2.4596194968160305 1.0756353814543156 5 1.5068682228710384 0.8237253657564966 6 0.9976361227921544 0.6544260481435799 7 0.7343066763644072 0.5619694124138849 8 0.5515343478320461 0.48239157266678057 9 0.42783168643924574 0.42097142449607877 >10 3.408842670303279 7.470244609029594 >50 0.5241627269235294 4.118917282178209 >100 1.2702109049919277 37.04257096836309 >500 0.22971579059028585 15.93131138067595 >1k 0.04485930904056696 9.220156395903874 >5k 0.0030106918819172456 2.134947071530595 >10k+ 0.004817107011067593 8.163956497177772 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA 24870 0.4006770427037629 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAA 20903 0.3367652683408426 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAA 19950 0.3214116205042247 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAA 19792 0.31886610491326395 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC 19748 0.3181572271537559 No Hit AAAAAAAAAAAAAAAAAAAAAAAAA 16983 0.27361070431194234 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAA 15442 0.2487838718709894 No Hit AAAAAAAAAAAAAAAAAAAAAAAA 13250 0.21346887076095128 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT 13163 0.21206722610010575 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAG 13083 0.2107783574464548 No Hit ATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACAT 12983 0.20916727162939097 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGA 12916 0.20808784413195824 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACA 12123 0.19531193360264246 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTC 11540 0.18591930328916056 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA 10858 0.1749316980167856 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 10422 0.16790736385438748 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCA 8085 0.13025628830960687 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCC 7958 0.12821020932193586 No Hit ATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACAC 7291 0.11746426692212043 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAA 6628 0.10678276795498755 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACT 6374 0.10269060997964553 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0426293307195077 0.0 0.0 0.0 0.0 2 0.08282592185524909 0.0 0.0 0.0 0.0 3 0.12717911439901505 0.0 0.0 0.0 0.0 4 0.18144048471772325 0.0 0.0 0.0 0.0 5 0.226115894424902 0.0 0.0 0.0 0.0 6 0.29921085794508584 0.0 0.0 0.0 0.0 7 0.34585179234908237 0.0 0.0 0.0 0.0 8 0.4030614497130173 0.0 0.0 0.0 0.0 9 0.4590627927141544 0.0 0.0 0.0 0.0 10 0.5102953216967827 0.0 0.0 0.0 0.0 11 0.566731657868527 0.0 0.0 0.0 0.0 12 0.6137914745849601 0.0 0.0 0.0 0.0 13 0.66077073701054 0.0 0.0 0.0 0.0 14 0.7070733433929531 0.0 0.0 0.0 0.0 15 0.7579353226376568 0.0 0.0 0.0 0.0 16 0.8076534309522452 0.0 0.0 0.0 0.0 17 0.8687296942771332 0.0 0.0 0.0 0.0 18 0.9092323917181167 0.0 0.0 0.0 0.0 19 0.9511367338199457 0.0 0.0 0.0 0.0 20 0.9937660645394534 0.0 0.0 0.0 0.0 21 1.0304343777358251 0.0 0.0 0.0 0.0 22 1.063268306687585 0.0 0.0 0.0 0.0 23 1.1011449342467545 0.0 0.0 0.0 0.0 24 1.1386349012098287 0.0 0.0 0.0 0.0 25 1.173676017730966 0.0 0.0 0.0 0.0 26 1.2183192057218035 0.0 0.0 0.0 0.0 27 1.2527158879161153 0.0 0.0 0.0 0.0 28 1.2890458730909036 0.0 0.0 0.0 0.0 29 1.326310288039589 0.0 0.0 0.0 0.0 30 1.3614158479934086 0.0 0.0 0.0 0.0 31 1.394137000937974 0.0 0.0 0.0 0.0 32 1.4280986899616788 0.0 0.0 0.0 0.0 33 1.4597887479833234 0.0 0.0 0.0 0.0 34 1.4957965159946989 0.0 0.0 0.0 0.0 35 1.5317076188570506 0.0 0.0 0.0 0.0 36 1.5601271726700559 0.0 0.0 0.0 0.0 37 1.5790735418787258 0.0 0.0 0.0 0.0 38 1.597439920193253 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGCGTAG 80 0.0 161.12445 44 TAGTTCG 75 0.0 128.89955 44 TCGTAAG 140 0.0 126.59777 44 CCTCGAT 110 0.0 124.505264 44 ACGAAGC 145 0.0 122.23234 44 GCATACG 140 0.0 120.84333 44 AACTGTC 90 0.0 116.36766 44 TAAACGC 155 0.0 103.951256 44 TACGATT 95 0.0 101.32602 43 ATAGCGG 170 0.0 98.34585 43 TTCGTAA 120 0.0 92.88219 43 TCGCAAT 55 0.0 92.11456 43 CGATAGG 55 0.0 92.11456 43 ATGCGTA 90 0.0 90.06758 43 CAGTTCG 135 0.0 90.06757 43 GTCCAAC 135 0.0 90.06757 43 TGGCCGA 460 0.0 89.21095 43 AATCGCA 325 0.0 86.759315 44 TGTCACG 95 0.0 85.32718 43 TTATACG 85 0.0 85.30118 44 >>END_MODULE