##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841131.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 15764226 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 37.53709240149183 39.0 37.0 39.0 35.0 39.0 2 38.01015673081571 39.0 38.0 39.0 35.0 39.0 3 38.1311333648731 39.0 38.0 39.0 35.0 39.0 4 38.63640752168866 39.0 38.0 41.0 35.0 41.0 5 39.28600072087269 40.0 39.0 41.0 36.0 41.0 6 39.33748590003721 40.0 39.0 41.0 36.0 41.0 7 39.342724025905234 40.0 39.0 41.0 36.0 41.0 8 39.2778914740248 40.0 39.0 41.0 36.0 41.0 9 39.27159519281188 40.0 39.0 41.0 36.0 41.0 10 39.209109790737585 40.0 39.0 41.0 35.0 41.0 11 39.10878085609785 40.0 38.0 41.0 35.0 41.0 12 39.053195126738224 40.0 38.0 41.0 35.0 41.0 13 39.01952477717587 40.0 38.0 41.0 35.0 41.0 14 38.985217923163496 40.0 38.0 41.0 35.0 41.0 15 38.93787186253229 40.0 38.0 41.0 35.0 41.0 16 39.01675293160603 40.0 38.0 41.0 35.0 41.0 17 39.03644378100137 40.0 38.0 41.0 35.0 41.0 18 39.04943623619707 40.0 38.0 41.0 35.0 41.0 19 39.09129233493608 40.0 39.0 41.0 35.0 41.0 20 39.12683356607549 40.0 39.0 41.0 35.0 41.0 21 39.15194859550986 40.0 39.0 41.0 35.0 41.0 22 39.13576524467487 40.0 38.0 41.0 35.0 41.0 23 39.090771725805 40.0 38.0 41.0 35.0 41.0 24 39.07208511220278 40.0 38.0 41.0 35.0 41.0 25 39.061778021804116 40.0 38.0 41.0 35.0 41.0 26 39.05549010494914 40.0 38.0 41.0 35.0 41.0 27 38.97022312573802 40.0 38.0 41.0 35.0 41.0 28 38.95419866888004 40.0 38.0 41.0 35.0 41.0 29 38.9122873054201 40.0 38.0 41.0 35.0 41.0 30 38.93707000569835 40.0 38.0 41.0 35.0 41.0 31 38.82004842699278 40.0 38.0 41.0 35.0 41.0 32 38.690037739091444 40.0 38.0 41.0 35.0 41.0 33 38.48439217889111 40.0 38.0 41.0 34.0 41.0 34 38.56819986231028 40.0 37.0 41.0 35.0 41.0 35 38.596832374635326 40.0 37.0 41.0 35.0 41.0 36 38.60029795375895 40.0 37.0 41.0 35.0 41.0 37 38.526865697636616 40.0 37.0 41.0 35.0 41.0 38 38.4790583904131 40.0 37.0 41.0 34.0 41.0 39 38.504784711453816 40.0 37.0 41.0 35.0 41.0 40 38.39004968556563 40.0 37.0 41.0 34.0 41.0 41 38.32276291700031 40.0 36.0 41.0 34.0 41.0 42 38.1939039437485 40.0 36.0 41.0 34.0 41.0 43 38.100147696853526 40.0 36.0 41.0 34.0 41.0 44 37.94353546168986 39.0 36.0 41.0 34.0 41.0 45 37.79094259803047 39.0 35.0 41.0 34.0 41.0 46 37.506704775239506 39.0 35.0 41.0 33.0 41.0 47 37.24749496928362 39.0 35.0 41.0 32.0 41.0 48 37.26925940552733 39.0 35.0 41.0 33.0 41.0 49 37.246245246294556 38.0 35.0 40.0 33.0 41.0 50 36.98453710188971 38.0 35.0 40.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 3.0 19 7.0 20 19.0 21 69.0 22 169.0 23 328.0 24 777.0 25 1668.0 26 3432.0 27 7207.0 28 15224.0 29 31403.0 30 61181.0 31 113126.0 32 196702.0 33 343426.0 34 677222.0 35 574994.0 36 882130.0 37 1443088.0 38 2231142.0 39 3625707.0 40 5555202.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 53.89917018444166 19.611010397846364 26.489819417711974 2 27.866709091838697 22.778682569001486 29.459188164391957 19.895420174767857 3 25.597913909633114 21.62734155168798 27.801580616771165 24.973163921907744 4 21.773660184775327 23.009394815831744 32.037348360775844 23.17959663861708 5 19.09526671338003 24.852365095501675 30.91546010568486 25.136908085433436 6 23.981082230107585 24.925353138175005 28.925308480099183 22.168256151618227 7 25.12214681520044 25.05179765882575 27.087248051379113 22.738807474594694 8 21.334387111679316 24.603072805477414 27.361597074287058 26.70094300855621 9 22.881795782425346 26.478122046715136 26.863596094093044 23.77648607676647 10 26.21097921331501 22.903338229228634 28.08461385925322 22.801068698203135 11 24.534702813826698 23.96221038698633 28.13808936766068 23.364997431526294 12 24.10419008202496 23.791602581693514 27.63903537033788 24.46517196594365 13 25.279300106456226 25.00829409575833 26.53074118577087 23.181664612014572 14 22.744878181776894 26.882207854670444 25.476360209502197 24.89655375405047 15 21.469097182443335 28.147731452213385 27.584919170785803 22.798252194557474 16 25.82533389206676 29.32519490649271 22.886147407427423 21.963323794013103 17 24.65826105258831 30.992482599526294 22.257020420793257 22.092235927092137 18 23.094238816418898 28.544896527111447 23.6804014355034 24.680463220966256 19 27.19913429305061 24.83360109148397 25.0858621285942 22.881402486871224 20 27.63496285830969 24.739216501970983 25.342189334255927 22.283631305463395 21 24.511669650003746 26.548978681224185 25.512086670160656 23.427264998611413 22 26.34035442019164 28.392608682468772 22.959135450100753 22.30790144723883 23 27.159328976887288 26.08716723548622 25.992173672212004 20.761330115414484 24 23.440909816948828 28.632043209733226 23.967500846536964 23.959546126780978 25 22.879327122724362 27.535939553278048 29.117278623297317 20.467454700700273 26 25.322778151948743 29.624357150581965 25.652465018496677 19.40039967897261 27 26.375871419370956 26.54534912317088 25.487664162663666 21.591115294794502 28 26.537364816196497 27.66554449157465 24.4458206292614 21.351270062967448 29 26.595615367946557 28.41261273691293 25.01450310157726 19.97726879356325 30 27.978622110519847 28.969929220124328 23.74787290443327 19.303575764922552 31 26.128390060865936 26.840307456565192 25.32599502336718 21.70530745920168 32 23.966216062004346 26.745201389271145 28.143038003573867 21.145544545150642 33 23.496157671424246 25.385766042360203 29.606334893911473 21.511741392304078 34 21.921521251194427 27.139977983637877 26.788318419233704 24.15018234593399 35 22.50634392029504 25.688879561842903 27.50993559751197 24.294840920350087 36 25.272282855372463 24.303356458556237 27.69018914283078 22.73417154324052 37 20.448350158098414 27.97294511439506 26.530009555501604 25.048695172004926 38 22.52851474016737 27.082080113724423 27.486316116479248 22.903089029628955 39 24.31987208075995 27.20341437435293 26.02729044670431 22.44942309818281 40 20.082537001975698 27.16097625577979 28.433081946106327 24.32340479613819 41 22.265927762864088 28.73478127436213 26.98795342225107 22.011337540522714 42 22.099362262392866 29.645177690292577 25.875302233895315 22.380157813419242 43 21.88844151402593 26.423756217718463 27.314951254625587 24.37285101363002 44 21.27269187789468 29.212681828612634 24.681465302397886 24.8331609910948 45 21.495969760673958 26.235886852552554 27.678775485117534 24.589367901655955 46 21.598971518182395 27.928494978864855 27.167816881923816 23.304716621028934 47 23.324933973186074 26.49194614218464 28.38324421406937 21.799875670559917 48 23.082264218799185 28.765870759184192 25.568141122536197 22.583723899480425 49 20.878870789702273 29.099252252004938 25.61779954063471 24.404077417658076 50 22.177126769792324 28.77525068229478 26.72155827481717 22.326064273095728 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 171251.0 1 173633.0 2 135460.5 3 93354.0 4 87884.5 5 60281.0 6 25013.5 7 15236.5 8 18202.0 9 20116.5 10 21455.0 11 21888.5 12 21384.5 13 22511.5 14 28676.5 15 36255.5 16 40351.5 17 42713.0 18 44127.5 19 43156.5 20 42689.5 21 50747.5 22 63883.0 23 80451.5 24 98820.0 25 117652.0 26 133694.0 27 151231.0 28 178560.5 29 211854.5 30 250994.0 31 314302.0 32 407743.5 33 452181.5 34 495372.5 35 599180.0 36 635059.0 37 628868.0 38 679166.5 39 751877.5 40 822618.5 41 888057.0 42 978912.0 43 1126627.0 44 1249311.0 45 1272974.5 46 1305817.0 47 1361338.5 48 1445136.5 49 1627002.5 50 1812706.0 51 1803311.5 52 1657249.5 53 1492338.5 54 1263340.5 55 1105524.0 56 1015813.0 57 891972.5 58 758903.0 59 642876.5 60 542913.5 61 438912.5 62 348088.5 63 272834.0 64 222802.0 65 196771.0 66 138950.5 67 80650.0 68 53041.5 69 36653.5 70 25918.5 71 18451.0 72 13724.0 73 9622.0 74 6521.5 75 4603.0 76 3527.5 77 2131.0 78 1112.0 79 749.0 80 566.5 81 355.5 82 250.0 83 275.5 84 276.5 85 223.5 86 141.5 87 100.5 88 76.0 89 68.5 90 37.5 91 4.0 92 1.0 93 1.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 68288.0 25 59889.0 26 62319.0 27 80010.0 28 84947.0 29 81535.0 30 155534.0 31 274684.0 32 270603.0 33 47260.0 34 45557.0 35 54172.0 36 67835.0 37 93472.0 38 44115.0 39 48144.0 40 51712.0 41 59254.0 42 73974.0 43 135451.0 44 498823.0 45 1219364.0 46 1681325.0 47 1919492.0 48 2685281.0 49 3044283.0 50 2856903.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.939549898497697 #Duplication Level Percentage of deduplicated Percentage of total 1 68.54776104080536 6.813338912953813 2 12.888446324486475 2.562107107126851 3 5.341184875064806 1.5926692074842346 4 2.800073079090255 1.1132586435623073 5 1.691504290698144 0.8406395650458578 6 1.1361257378159082 0.6775547077193239 7 0.8031240329289424 0.5587883979985951 8 0.6111183850177323 0.48593933454184624 9 0.4990761541870818 0.44645331039235464 >10 3.7151790962360343 7.212772890511621 >50 0.4406045559260606 3.090912995430759 >100 1.1812352982720025 32.5682481884557 >500 0.2686407656937106 16.939899003845035 >1k 0.06701880154674675 12.142014129044288 >5k 0.004241696300427009 2.9240169791701485 >10k+ 0.004665865930469711 10.031386626717257 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACCTG 67462 0.4279436237465766 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAG 47956 0.3042077676379418 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA 46120 0.292561144454539 No Hit TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACC 35993 0.22832075612212108 No Hit TTGAGTTCCAGCCAGGAGGACCAGGGGCTGGGTTGGG 34863 0.2211526274743841 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCC 29350 0.18618104054077886 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATG 24666 0.15646819577440718 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT 24524 0.15556742208593052 No Hit TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACCT 22907 0.14531002029531928 No Hit TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAA 22892 0.1452148681451281 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGA 22075 0.14003224769804748 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC 21396 0.13572502703272588 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAA 21113 0.13392982313245191 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAA 20449 0.12971775461732152 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGA 20164 0.12790986376368876 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAA 18988 0.12044993518869876 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACA 17384 0.1102749985949199 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAA 16762 0.10632935610032487 No Hit TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAAC 16340 0.1036524089416125 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.057414807425369314 0.0 0.0 0.0 0.0 2 0.0881045476003706 0.0 0.0 0.0 0.0 3 0.11244446761927925 0.0 0.0 0.0 0.0 4 0.1512982622806854 0.0 0.0 0.0 0.0 5 0.17525123022214983 0.0 0.0 0.0 0.0 6 0.2437607783598129 0.0 0.0 0.0 0.0 7 0.27573824430073507 0.0 0.0 0.0 0.0 8 0.3190895639278452 0.0 0.0 0.0 0.0 9 0.36209833581426704 0.0 0.0 0.0 0.0 10 0.39397430612831863 0.0 0.0 0.0 0.0 11 0.4349024176638929 0.0 0.0 0.0 0.0 12 0.4680788006972242 0.0 0.0 0.0 0.0 13 0.5063807128875214 0.0 0.0 0.0 0.0 14 0.5434963949387683 0.0 0.0 0.0 0.0 15 0.58575029310034 0.0 0.0 0.0 0.0 16 0.6211278625414277 0.0 0.0 0.0 0.0 17 0.6662299817320558 0.0 0.0 0.0 0.0 18 0.7005164731842844 0.0 0.0 0.0 0.0 19 0.7344667603725041 0.0 0.0 0.0 0.0 20 0.7749444850638401 0.0 0.0 0.0 0.0 21 0.8063320076735768 0.0 0.0 0.0 0.0 22 0.8370724956620135 0.0 0.0 0.0 0.0 23 0.8677051445469001 0.0 0.0 0.0 0.0 24 0.8992956584103781 0.0 0.0 0.0 0.0 25 0.930962293994009 0.0 0.0 0.0 0.0 26 0.9629905077483665 0.0 0.0 0.0 0.0 27 0.9907685921275171 0.0 0.0 0.0 0.0 28 1.0215090801159536 0.0 0.0 0.0 0.0 29 1.0522685985344284 0.0 0.0 0.0 0.0 30 1.0832818560200799 0.0 0.0 0.0 0.0 31 1.1107554535186186 0.0 0.0 0.0 0.0 32 1.1397197680368196 0.0 0.0 0.0 0.0 33 1.169153499829297 0.0 0.0 0.0 0.0 34 1.1982193099743685 0.0 0.0 0.0 0.0 35 1.2276466982901666 0.0 0.0 0.0 0.0 36 1.2507242664498721 0.0 0.0 0.0 0.0 37 1.2670016276092464 0.0 0.0 0.0 0.0 38 1.280747941573535 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGCGC 60 0.0 165.97737 44 CGGTACT 115 0.0 163.57191 44 CGACCCG 140 0.0 118.55527 44 ACGAACA 335 0.0 115.60613 44 ACGGTGC 270 0.0 102.45517 44 CATGACC 2390 0.0 99.07714 44 GACGCGT 175 0.0 97.78753 43 ACATTGG 3025 0.0 88.52126 44 GTTCGGC 350 0.0 85.564095 43 CTATCAT 11430 0.0 83.93257 44 CGAATGG 1210 0.0 80.43732 43 CCAGAAT 8850 0.0 79.89419 44 ACGCGGA 165 0.0 77.78554 43 ACTCCGA 230 0.0 74.40356 43 CGGGCAC 65 3.6379788E-12 74.04585 43 TCGCACT 225 0.0 73.76772 44 CGATACG 45 3.6379788E-12 73.589966 42 TCCGGGC 3465 0.0 72.84677 43 ACGAATT 140 0.0 70.961754 42 ACTTCTA 9110 0.0 70.6907 44 >>END_MODULE