##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841125.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2166176 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 35.62200486017757 37.0 35.0 39.0 30.0 39.0 2 37.00104839126645 38.0 37.0 39.0 34.0 39.0 3 36.915806933508634 38.0 35.0 39.0 33.0 39.0 4 37.16287919356507 38.0 36.0 39.0 33.0 40.0 5 37.505566029722424 38.0 36.0 40.0 33.0 41.0 6 37.43495357717932 38.0 36.0 40.0 33.0 41.0 7 37.4052916291197 38.0 36.0 40.0 33.0 41.0 8 37.3328944647157 38.0 36.0 40.0 33.0 41.0 9 37.27544899398756 38.0 36.0 40.0 32.0 41.0 10 37.2385050891525 38.0 36.0 40.0 33.0 41.0 11 37.07503037610979 38.0 36.0 40.0 32.0 41.0 12 36.946904129673676 38.0 35.0 40.0 32.0 41.0 13 36.89255489858626 38.0 35.0 40.0 32.0 41.0 14 36.75133737978816 38.0 35.0 40.0 31.0 41.0 15 36.722014739337894 38.0 35.0 40.0 31.0 40.0 16 37.071346003279515 38.0 36.0 40.0 33.0 40.0 17 37.36722408520822 38.0 36.0 40.0 33.0 41.0 18 37.55182035070096 39.0 36.0 40.0 33.0 41.0 19 37.63314753741155 39.0 36.0 40.0 33.0 41.0 20 37.717840101635325 39.0 37.0 40.0 33.0 41.0 21 37.819754719838095 39.0 37.0 40.0 33.0 41.0 22 37.76491660880741 39.0 37.0 40.0 33.0 41.0 23 37.750286218663675 39.0 36.0 40.0 33.0 41.0 24 37.641428028008804 39.0 36.0 40.0 33.0 41.0 25 37.710942273796896 39.0 36.0 40.0 33.0 41.0 26 37.51670759167467 39.0 36.0 40.0 33.0 41.0 27 37.58016211696387 39.0 36.0 40.0 33.0 41.0 28 37.63234363273877 39.0 36.0 40.0 33.0 41.0 29 37.56698806057841 39.0 36.0 40.0 33.0 41.0 30 37.566013864818025 39.0 36.0 40.0 33.0 41.0 31 37.42444394069026 39.0 36.0 40.0 33.0 41.0 32 37.229743821924146 39.0 35.0 40.0 32.0 41.0 33 37.172624416400495 38.0 35.0 40.0 32.0 41.0 34 37.319987110902744 39.0 36.0 40.0 33.0 41.0 35 37.35978787283823 39.0 35.0 40.0 33.0 41.0 36 37.41423738673252 39.0 36.0 40.0 33.0 41.0 37 37.38232649340267 39.0 35.0 40.0 33.0 41.0 38 37.43128882351044 39.0 36.0 40.0 33.0 41.0 39 37.415653756540706 39.0 35.0 40.0 33.0 41.0 40 37.31402130104087 39.0 35.0 40.0 33.0 41.0 41 37.28203671386367 39.0 35.0 40.0 33.0 41.0 42 37.28155660102154 38.0 35.0 40.0 33.0 41.0 43 37.13108664640344 38.0 35.0 40.0 32.0 41.0 44 36.930701358923166 38.0 35.0 40.0 32.0 41.0 45 36.68994670138938 38.0 35.0 40.0 31.0 41.0 46 36.37997780588017 38.0 34.0 40.0 31.0 41.0 47 36.11525314017336 37.0 34.0 40.0 31.0 41.0 48 36.07985964586141 37.0 34.0 40.0 31.0 40.0 49 35.840298002400004 37.0 34.0 40.0 30.0 40.0 50 35.646327794049824 37.0 34.0 39.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 9.0 21 31.0 22 72.0 23 130.0 24 276.0 25 501.0 26 821.0 27 1784.0 28 3958.0 29 8506.0 30 17831.0 31 35102.0 32 63667.0 33 103982.0 34 146037.0 35 193579.0 36 280175.0 37 371734.0 38 427905.0 39 387477.0 40 122596.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 49.173335869292245 20.95609959670867 29.870564533999083 2 22.37495937541548 22.437973645724078 31.99624591907583 23.190821059784618 3 18.83152615484614 22.808580650879705 30.57646285435717 27.783430339916976 4 23.033354630464007 24.072882351203226 31.006067835669864 21.887695182662906 5 17.790844326592115 23.726049960852674 32.1030701106466 26.38003560190862 6 18.111640051408564 25.598197007076063 33.034665696600825 23.25549724491454 7 23.885455290798163 24.64388858523038 24.31229041407531 27.15836570989615 8 22.961707635944634 22.040683674826052 27.46600460904377 27.531604080185545 9 21.854318393334612 23.82955032278079 28.72508974340035 25.591041540484245 10 23.418872704710974 21.656735186799224 30.93949891421565 23.98489319427415 11 23.19968460549835 24.516336622693633 26.950026221322737 25.33395255048528 12 23.194745025334967 26.49895484023459 25.42383444373864 24.8824656906918 13 24.702978889988625 22.89633898630582 26.829722053978994 25.57096006972656 14 19.603254767848966 26.29578575332752 25.72607211971696 28.374887359106555 15 22.08800208293324 28.867183460623696 27.0096243333875 22.03519012305556 16 24.81691238385062 27.692578996351173 23.87151367201926 23.618994947778944 17 22.096634807144017 30.3503039457551 24.73663266512047 22.81642858198041 18 21.673585156515447 27.962593990516005 22.74247337243142 27.62134748053713 19 22.902248016781645 25.994240541858094 26.223584787201037 24.879926654159217 20 25.221957957248165 23.96901267487037 25.70465188424209 25.10437748363937 21 22.37560567562377 27.677206284253913 25.380301508280027 24.56688653184229 22 26.475734197036623 27.11007785147652 22.594839939136985 23.819348012349874 23 29.73027122449884 27.374368472367895 21.809400528858227 21.085959774275036 24 24.362194023015675 30.620226611318746 22.844404148139393 22.173175217526182 25 26.489076391894073 26.497248435703657 24.992338708928514 22.02133646347375 26 24.821726178514044 30.695345017913844 23.420632747047932 21.062296056524183 27 22.081946381761185 30.616460195469642 26.08464394182375 21.216949480945424 28 25.262380891014807 27.8144590917016 23.39416072227234 23.528999295011257 29 24.08108966627418 30.22209378142189 22.335674724203898 23.361141828100035 30 27.03649143077219 28.270315809743884 22.4920566146736 22.20113614481032 31 26.11393457208113 28.324082943939473 24.48454977782003 21.077432706159367 32 23.896802376202157 27.395680446582716 27.377570363146976 21.32994681406815 33 20.283054939256022 26.480971579546026 31.243761391553427 21.992212089644532 34 21.52845756906128 26.50491155035173 27.051120134836655 24.91551074575034 35 20.98784747787104 24.167914232889938 29.963217248318852 24.881021040920174 36 21.281669027984833 24.565879749037357 26.38591904096052 27.76653218201729 37 19.962831372431406 27.666427597447424 26.640515562165152 25.730225467956018 38 23.41478359745371 25.18083394278854 26.61913089433347 24.78525156542428 39 21.71751483343924 26.94887464599791 26.74950903865716 24.584101481905687 40 19.84162247572675 25.490210512755123 29.371669247575305 25.29649776394282 41 20.08020762104407 29.775983652218912 26.66224882315513 23.481559903581886 42 20.48159797177242 29.12824402378288 27.172362216835772 23.21779578760893 43 20.883837857844416 24.151483931750196 28.777257755866003 26.187420454539385 44 19.568298756354476 26.72428023183254 26.1528711439493 27.554549867863678 45 20.070443420714433 24.546566377530414 28.52235462923995 26.8606355725152 46 19.104591694218865 29.518115886825225 26.54870009497255 24.82859232398336 47 22.54147493317319 27.736113348362718 26.43357515445696 23.288836564007127 48 20.797601896175117 28.929497606543663 26.0319747176651 24.24092577961612 49 18.529883818746917 29.276208052642378 25.91199361811715 26.281914510493547 50 20.668928803765205 26.470363662463082 28.7313808911517 24.129326642620008 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 39873.0 1 38988.5 2 25723.5 3 13268.0 4 12573.5 5 8902.5 6 3886.5 7 2137.5 8 2421.0 9 2567.5 10 2655.5 11 2555.0 12 2342.0 13 2260.0 14 2730.0 15 3848.0 16 4417.5 17 3669.5 18 2909.0 19 3476.5 20 4444.5 21 5281.0 22 7478.5 23 11356.5 24 14600.5 25 16285.5 26 18032.0 27 19915.0 28 23120.0 29 26706.5 30 29106.0 31 39533.0 32 55941.0 33 61819.5 34 66849.5 35 79103.5 36 85054.5 37 86700.0 38 91009.5 39 99495.0 40 112964.0 41 127282.0 42 136539.5 43 139588.5 44 149851.0 45 168311.0 46 180771.0 47 193048.5 48 208503.5 49 213030.5 50 235370.5 51 257716.5 52 234828.5 53 197326.5 54 162886.0 55 142899.0 56 144267.0 57 143515.5 58 128810.0 59 106520.0 60 83724.5 61 68807.5 62 60113.0 63 47680.0 64 36166.0 65 30106.0 66 21905.0 67 13344.5 68 9248.0 69 7161.5 70 5378.5 71 3812.0 72 2594.5 73 1570.0 74 846.5 75 806.5 76 758.5 77 659.0 78 346.5 79 78.0 80 46.5 81 23.5 82 8.5 83 6.5 84 7.0 85 6.0 86 4.0 87 2.0 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 12492.0 25 13998.0 26 13320.0 27 15694.0 28 17187.0 29 16285.0 30 25935.0 31 41335.0 32 35331.0 33 10148.0 34 8643.0 35 9861.0 36 12058.0 37 11407.0 38 10417.0 39 10280.0 40 7950.0 41 8445.0 42 13033.0 43 24644.0 44 77498.0 45 195023.0 46 228053.0 47 271289.0 48 340017.0 49 408414.0 50 327419.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.491137060534897 #Duplication Level Percentage of deduplicated Percentage of total 1 69.32486769454852 5.193220856033108 2 11.42123985112549 1.7111614625204843 3 4.762726478065211 1.0703471048707545 4 2.6599427755528016 0.797039836193826 5 1.6935448926662717 0.6343288454565952 6 1.146537765994491 0.5153322930086532 7 0.7938639820222995 0.416286072772574 8 0.6235633445014974 0.37369587836690055 9 0.47353508275366707 0.3192584587091509 >10 4.064720806957791 6.293586115841371 >50 0.729865222178919 3.874568105561608 >100 1.6448034114103498 32.692891870411806 >500 0.5271972899488799 27.73594999125456 >1k 0.12772641388131084 14.762744474981169 >5k 0.003909992261672781 1.830642996113852 >10k+ 0.0019549961308363904 1.7789456379035968 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 12989 0.5996281003944278 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAA 12210 0.5636661102329635 No Hit TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTTTCCG 11242 0.5189790672595394 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA 7690 0.3550034715554045 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAG 7117 0.3285513273159706 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAAT 6153 0.284048941544916 No Hit TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTTTC 6053 0.279432511485678 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 5454 0.2517800954308422 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCC 5033 0.23234492488145006 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAA 4609 0.21277126143028083 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCTA 4596 0.21217112552257988 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAA 4378 0.20210730799344098 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAA 4351 0.2008608718774467 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT 4327 0.19975292866322958 No Hit CCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCTAG 3933 0.18156419422983175 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGA 3794 0.17514735644749088 No Hit CTCTTTTCCTCCTTGGCTGTCTGAAGATAGATCGCCATCATGAACGACA 3753 0.1732546201232033 No Hit TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTT 3710 0.17126955519773093 No Hit AAAAAAAAAAAAAAAAAAAAAAAAA 3549 0.1638371028023577 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3460 0.15972848004963586 No Hit TAAATCTCCTGCTTGCTGTTCAGGTCGGGGATGTTATCTCCACCCCAGC 3430 0.15834355103186445 No Hit TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTTTCCGG 3219 0.1486028836068722 No Hit ATTAATCCCCTGGCCCAACCCGTCATCTACTCTACCATCTTTGCAGGCAC 3179 0.14675631158317698 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC 3065 0.14149358131564566 No Hit CCTTTCCGGCGGTGACGACCTACGCACACGAGAACATGCCTCTCGCAAA 2822 0.1302756562716972 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCA 2808 0.1296293560634039 No Hit AAAAAAAAAAAAAAAAAAAAAAAA 2798 0.1291677130574801 No Hit TCTCCCAGACAGTGGCTCAGCCTTCAGGACTCTCTTCCAGCATGGCCG 2784 0.12852141284918678 No Hit CTCATTTTTCTACTGCTCGTGGATTTACGCGCACGTTGGAACCGAAGAG 2693 0.12432046149528017 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTC 2554 0.1179036237129393 No Hit ATCAAAAGGGACAAGCATCAAGCACGCAGCAATGCAGCTCAAAACGCTT 2546 0.11753430930820025 No Hit ACTCTGCGTCCTCGCCTCACCAGGAAACTACTAAAGTTCCTGGGGAAGC 2535 0.11702650200168407 No Hit AGCTTTAATTTATTAATGCAAACAGTACCTAACAAACCCACAGGTCCT 2471 0.11407198676377174 No Hit CTTTCCGGCGGTGACGACCTACGCACACGAGAACATGCCTCTCGCAAAG 2431 0.11222541474007652 No Hit CTCTTCCTTTCTCCGCCATCGTGGTGTGTTCTTGACTCCGCTGCTCGCC 2337 0.10788597048439277 No Hit ATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGC 2330 0.10756282038024612 No Hit CCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCT 2325 0.10733199887728422 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2317 0.10696268447254517 No Hit CAGAGTGTTGCTTAACACAAAGCACCCAACTTACACTTAGGAGATTTCAA 2279 0.10520844105003473 No Hit CTCTTTTCCTCCTTGGCTGTCTGAAGATAGATCGCCATCATGAACGA 2242 0.10350036192811665 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.05465853190137828 0.0 0.0 0.0 0.0 2 0.09495996631852628 0.0 0.0 0.0 0.0 3 0.12505909030475826 0.0 0.0 0.0 0.0 4 0.1718235268048395 0.0 0.0 0.0 0.0 5 0.20159950068692478 0.0 0.0 0.0 0.0 6 0.28238702672359034 0.0 0.0 0.0 0.0 7 0.31793353817972314 0.0 0.0 0.0 0.0 8 0.3630360598584787 0.0 0.0 0.0 0.0 9 0.41686363434919416 0.0 0.0 0.0 0.0 10 0.45222548860295747 0.0 0.0 0.0 0.0 11 0.49820513199296823 0.0 0.0 0.0 0.0 12 0.5343056150562097 0.0 0.0 0.0 0.0 13 0.5698059622117501 0.0 0.0 0.0 0.0 14 0.6048446663613668 0.0 0.0 0.0 0.0 15 0.645653908085031 0.0 0.0 0.0 0.0 16 0.6829084986630819 0.0 0.0 0.0 0.0 17 0.7250103408033327 0.0 0.0 0.0 0.0 18 0.7523396067540218 0.0 0.0 0.0 0.0 19 0.7821155806361071 0.0 0.0 0.0 0.0 20 0.8223246864520704 0.0 0.0 0.0 0.0 21 0.85431654676259 0.0 0.0 0.0 0.0 22 0.8876010074896962 0.0 0.0 0.0 0.0 23 0.9134991801220215 0.0 0.0 0.0 0.0 24 0.9449370688254325 0.0 0.0 0.0 0.0 25 0.9771135863383216 0.0 0.0 0.0 0.0 26 1.006935724520999 0.0 0.0 0.0 0.0 27 1.0336648545639875 0.0 0.0 0.0 0.0 28 1.0604401489075679 0.0 0.0 0.0 0.0 29 1.0906316014949846 0.0 0.0 0.0 0.0 30 1.119207303561668 0.0 0.0 0.0 0.0 31 1.1483369772354601 0.0 0.0 0.0 0.0 32 1.1754354216831873 0.0 0.0 0.0 0.0 33 1.2023030446279526 0.0 0.0 0.0 0.0 34 1.231248061099375 0.0 0.0 0.0 0.0 35 1.2608855420796832 0.0 0.0 0.0 0.0 36 1.2838753637746887 0.0 0.0 0.0 0.0 37 1.300171361883799 0.0 0.0 0.0 0.0 38 1.3149439380733605 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCACAA 100 0.0 266.4947 44 CCTTCGG 105 0.0 266.4947 44 GTACCCC 40 0.0 266.4947 44 ACTGCAT 80 0.0 266.4947 44 ACCGCAA 130 0.0 266.4947 44 CGGATAC 20 1.0256372E-7 266.4947 44 CTCGCTA 55 0.0 266.4947 44 CTTAGAA 55 0.0 266.4947 44 ACGGTCC 95 0.0 266.4947 44 GCAACAT 115 0.0 254.90797 44 CCAACGC 85 0.0 250.81856 44 CCCTGTT 215 0.0 247.90205 44 CCATTGC 145 0.0 238.9263 44 TAGTGAC 40 0.0 233.18286 44 ACATGAG 35 2.7284841E-11 228.42403 44 TTGTTAA 65 0.0 225.49551 44 CGGACGG 55 0.0 218.04112 44 CCCTTAG 50 0.0 213.19574 44 CAGGCAC 420 0.0 212.56123 44 ACCACTC 45 0.0 207.27367 44 >>END_MODULE