Basic Statistics
Measure | Value |
---|---|
Filename | ERR841121.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 14596350 |
Sequences flagged as poor quality | 0 |
Sequence length | 24-50 |
%GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAG | 52799 | 0.3617274181559088 | No Hit |
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA | 42955 | 0.2942859002421838 | No Hit |
AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATG | 35588 | 0.24381437825209729 | No Hit |
ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCC | 31972 | 0.21904106163527182 | No Hit |
ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGA | 23982 | 0.16430134930993023 | No Hit |
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT | 22978 | 0.1574229173731789 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAA | 21847 | 0.1496744049025955 | No Hit |
TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTC | 21289 | 0.1458515313759947 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAAA | 21054 | 0.14424153983701404 | No Hit |
ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC | 20343 | 0.13937045905311946 | No Hit |
AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAA | 20183 | 0.1382742946010475 | No Hit |
AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGA | 20090 | 0.13763714901328072 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAA | 19901 | 0.13634230475427075 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 17038 | 0.1167278120900088 | No Hit |
TTGAGTTCCAGCCAGGAGGACCAGGGGCTGGGTTGGG | 16592 | 0.11367225367985832 | No Hit |
TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTTTC | 16430 | 0.11256238717213549 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAA | 16333 | 0.11189783747306689 | No Hit |
ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCA | 16155 | 0.1106783545201369 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTATACG | 40 | 0.0 | 200.90822 | 44 |
ATATTCG | 85 | 0.0 | 165.45383 | 44 |
AATCGCA | 670 | 0.0 | 115.447266 | 44 |
CATGACC | 1840 | 0.0 | 114.64871 | 44 |
AAATCGT | 120 | 0.0 | 108.82529 | 44 |
ACTTCTA | 8875 | 0.0 | 97.454636 | 44 |
CTATCAT | 8600 | 0.0 | 87.838936 | 44 |
TACGATA | 100 | 0.0 | 84.88628 | 43 |
CCAGAAT | 10625 | 0.0 | 80.83601 | 44 |
ACACGTC | 200 | 0.0 | 80.36329 | 44 |
TATCCCG | 165 | 0.0 | 79.14566 | 44 |
AACGACA | 4520 | 0.0 | 79.111374 | 43 |
TCGCAAA | 1770 | 0.0 | 77.33283 | 43 |
TCGTAAC | 300 | 0.0 | 77.01482 | 44 |
TAAACCG | 535 | 0.0 | 73.228226 | 44 |
CGACTAC | 175 | 0.0 | 72.75967 | 43 |
GGCGCAT | 195 | 0.0 | 72.120895 | 44 |
TTACGAC | 100 | 3.5852281E-9 | 70.31788 | 44 |
TACCGAC | 205 | 0.0 | 68.602806 | 44 |
ACGACAC | 2100 | 0.0 | 68.404465 | 44 |