##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841101.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10246214 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 37.63043168920735 39.0 38.0 39.0 35.0 39.0 2 37.984680195045705 39.0 38.0 39.0 35.0 39.0 3 38.1229252092529 39.0 38.0 39.0 35.0 39.0 4 38.484326015443365 39.0 38.0 40.0 35.0 41.0 5 39.385031095388015 41.0 39.0 41.0 36.0 41.0 6 39.35971218247052 41.0 39.0 41.0 36.0 41.0 7 39.39368922023296 41.0 39.0 41.0 36.0 41.0 8 39.32825344073431 40.0 39.0 41.0 36.0 41.0 9 39.26411326173746 40.0 39.0 41.0 35.0 41.0 10 39.240236735246796 40.0 39.0 41.0 35.0 41.0 11 39.212128108977616 40.0 39.0 41.0 35.0 41.0 12 39.151185403701305 40.0 39.0 41.0 35.0 41.0 13 39.08903230012569 40.0 38.0 41.0 35.0 41.0 14 39.074211899146356 40.0 38.0 41.0 35.0 41.0 15 39.044845052035804 40.0 38.0 41.0 35.0 41.0 16 39.04768854134805 40.0 38.0 41.0 35.0 41.0 17 39.09762269263555 40.0 38.0 41.0 35.0 41.0 18 39.07372098611253 40.0 38.0 41.0 35.0 41.0 19 39.036449853575185 40.0 39.0 41.0 35.0 41.0 20 39.06237689355307 40.0 39.0 41.0 35.0 41.0 21 39.120060443789285 41.0 38.0 41.0 35.0 41.0 22 39.122361196047635 41.0 38.0 41.0 35.0 41.0 23 39.07196199493784 40.0 38.0 41.0 35.0 41.0 24 39.01827572603891 40.0 38.0 41.0 35.0 41.0 25 38.99619856358798 40.0 38.0 41.0 35.0 41.0 26 38.98602143624329 40.0 38.0 41.0 35.0 41.0 27 38.94768415102438 40.0 38.0 41.0 35.0 41.0 28 38.93828667383444 40.0 38.0 41.0 35.0 41.0 29 38.90029802368962 40.0 38.0 41.0 35.0 41.0 30 38.95345652890999 40.0 38.0 41.0 35.0 41.0 31 38.895210184328675 40.0 38.0 41.0 35.0 41.0 32 38.82428245459057 40.0 38.0 41.0 35.0 41.0 33 38.68537159272952 40.0 38.0 41.0 35.0 41.0 34 38.73077119512992 40.0 38.0 41.0 35.0 41.0 35 38.77520463914816 40.0 38.0 41.0 35.0 41.0 36 38.77944836720644 40.0 38.0 41.0 35.0 41.0 37 38.78227092269817 40.0 38.0 41.0 35.0 41.0 38 38.754451529752814 40.0 38.0 41.0 35.0 41.0 39 38.719167180155694 40.0 38.0 41.0 35.0 41.0 40 38.682053340272965 40.0 37.0 41.0 35.0 41.0 41 38.61433319150201 40.0 37.0 41.0 35.0 41.0 42 38.51743932115943 40.0 37.0 41.0 35.0 41.0 43 38.46597445043072 40.0 37.0 41.0 34.0 41.0 44 38.364801725089585 40.0 37.0 41.0 34.0 41.0 45 38.23358792644597 40.0 37.0 41.0 34.0 41.0 46 37.98188718631325 40.0 36.0 41.0 34.0 41.0 47 37.79701586614004 39.0 36.0 41.0 33.0 41.0 48 37.62147951494965 39.0 36.0 41.0 33.0 41.0 49 37.89206528746001 39.0 36.0 41.0 33.0 41.0 50 37.3343217267568 38.0 36.0 40.0 33.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 13.0 20 31.0 21 100.0 22 218.0 23 443.0 24 906.0 25 1676.0 26 3007.0 27 5799.0 28 11408.0 29 22274.0 30 42575.0 31 78048.0 32 135658.0 33 238765.0 34 407993.0 35 362425.0 36 557467.0 37 873466.0 38 1239044.0 39 2199857.0 40 4065040.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 55.83090495669912 15.623116987406274 28.545978055894594 2 24.34950119136688 24.87695455121277 32.38617698205405 18.387367275366294 3 22.236115700882298 23.29642929573792 27.62313962991599 26.8443153734638 4 20.625110894619223 26.085713220512474 31.44284318090565 21.846332703962652 5 18.265546669238024 27.90086172316916 29.333839796826418 24.499751810766394 6 18.935657599968145 29.677937626522343 29.24258657880852 22.14381819470099 7 23.700617613491186 29.13054519454698 24.17093767512566 22.99789951683617 8 20.85039410654511 28.954001936715358 26.94248822052711 23.253115736212422 9 22.0208264242773 29.02003608357194 27.89653817497858 21.062599317172175 10 21.982275599553162 27.96610533412634 27.07122845570081 22.98039061061969 11 22.836386200795726 27.609437007659608 26.15364074964665 23.40053604189801 12 20.25167539932311 28.080664721623034 27.495014255997386 24.172645623056475 13 20.86611698721108 28.41685719232489 26.71797602509571 23.999049795368318 14 18.38508350499023 29.29784601414727 27.768364002547674 24.54870647831482 15 19.470362418743157 31.55244463955174 27.780065885799377 21.197127055905725 16 20.063371700025005 33.65476262744463 25.079702610154346 21.202163062376016 17 20.983409091397075 36.242342781441025 22.18158824322818 20.592659883933713 18 20.6354659389312 30.4925702313069 24.8232078697556 24.0487559600063 19 21.689484525698955 28.263298033790825 26.18236355399175 23.864853886518475 20 21.136519303617902 27.223147984221296 28.468066351141992 23.172266361018814 21 20.583622399454082 30.268819292667516 25.819693010511003 23.3278652973674 22 22.125538271990024 29.61412869182705 24.982691167683985 23.27764186849894 23 23.162838488440705 28.412162775440763 26.386351095145972 22.03864764097256 24 21.576174380117376 30.780764485301592 25.870941208137953 21.77211992644307 25 20.841076264583428 30.1305539360602 26.183828768154356 22.844541031202024 26 22.76324835646659 31.255899345189942 26.146450097998652 19.83440220034482 27 22.730157835584798 29.81925998365415 25.86438580175284 21.586196379008214 28 22.566959034345157 27.916426058481132 25.953383076014997 23.563231831158717 29 21.54418610084867 31.12278954685333 25.356355441792527 21.976668910505477 30 22.817653642644352 30.696598144974015 26.281564059660433 20.2041841527212 31 22.68853906415479 30.059318953608205 25.27374569367064 21.978396288566362 32 21.00959432477117 30.057153916026508 27.246082308714385 21.687169450487936 33 19.96682803944098 27.978043473964288 29.440312639051143 22.614815847543593 34 20.537356313205986 30.225847335235777 26.572373336949955 22.664423014608275 35 20.546949137787628 28.48100952152751 27.661547922665925 23.310493418018932 36 19.59472362154283 29.127841312661484 28.36922748017669 22.908207585619 37 19.14086327867876 32.61423142676526 25.11921166336969 23.12569363118629 38 20.726421686787774 28.662082335158836 27.077951144752404 23.53354483330099 39 20.574919957626335 30.56327234986788 27.17788293633682 21.683924756168967 40 19.551082729800296 30.6718228475907 28.096903761677357 21.680190660931643 41 19.879020937375046 31.2343070784806 25.806701104682233 23.07997087946212 42 19.768159220780028 32.12603986117856 26.43804420123688 21.66775671680453 43 19.86420097843801 29.41058958704246 26.42109054631952 24.30411888820001 44 20.229246652638576 28.656723291486095 25.39085753991877 25.72317251595656 45 19.955202851603424 28.463905225685547 28.73800523003929 22.842886692671737 46 20.386051439286994 30.208871012951583 26.554070702134354 22.85100684562707 47 21.701972176768912 29.413561357320294 27.345835864072864 21.538630601837927 48 20.885057153118737 29.446569995854873 26.741113396176143 22.927259454850255 49 19.61258210078214 30.63596548124879 25.778123821251302 23.973328596717767 50 19.945841918239655 30.943134014151635 25.927224083941415 23.1837999836673 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 234531.0 1 226327.5 2 178950.0 3 137819.5 4 127930.5 5 85918.0 6 36523.5 7 21832.0 8 21914.5 9 21141.5 10 20575.0 11 21306.5 12 22200.5 13 23316.0 14 28658.5 15 34977.0 16 40104.0 17 46178.5 18 51782.0 19 54666.5 20 56101.5 21 63309.0 22 75045.5 23 97971.0 24 126554.5 25 156804.0 26 186273.5 27 209271.5 28 225030.0 29 235022.0 30 256518.5 31 308428.0 32 391502.5 33 442120.0 34 472337.5 35 529139.5 36 563689.0 37 567683.0 38 578810.0 39 608647.0 40 637736.0 41 660908.0 42 692116.5 43 713455.0 44 736680.5 45 784154.0 46 821896.0 47 792129.5 48 768404.0 49 807392.5 50 858189.0 51 861091.5 52 793539.5 53 676067.5 54 586653.5 55 527432.5 56 452660.5 57 416926.5 58 406630.0 59 370044.0 60 313391.0 61 254912.5 62 204465.5 63 170853.5 64 141958.5 65 116763.5 66 80646.5 67 51052.0 68 39222.5 69 31798.5 70 26469.0 71 19792.5 72 14305.0 73 10441.5 74 7484.5 75 5099.0 76 3921.5 77 3434.0 78 2975.0 79 2353.0 80 1430.0 81 723.0 82 252.5 83 173.0 84 153.0 85 85.5 86 24.5 87 17.5 88 9.5 89 4.5 90 3.0 91 1.5 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 49279.0 25 55979.0 26 62557.0 27 72505.0 28 76482.0 29 73701.0 30 97110.0 31 147711.0 32 250575.0 33 40391.0 34 38220.0 35 38925.0 36 39401.0 37 46245.0 38 31654.0 39 33737.0 40 41085.0 41 48013.0 42 57366.0 43 85912.0 44 223102.0 45 555631.0 46 1192001.0 47 891234.0 48 1988910.0 49 1241034.0 50 2767454.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.382753897978944 #Duplication Level Percentage of deduplicated Percentage of total 1 69.77199732063461 7.941974744712301 2 12.452840960746785 2.8349524797370464 3 5.054039655251344 1.725866687590572 4 2.6282089331605665 1.1966502191454609 5 1.6128469131583403 0.9179319743798203 6 1.0391387561093657 0.7096956435986924 7 0.7734955473095474 0.6163156619344975 8 0.6066794306656278 0.5524546123386257 9 0.49936528108782674 0.511573688983603 >10 3.6255143697153325 7.949254926886862 >50 0.4379880658514584 3.560544850729191 >100 1.2162330435663307 37.648605956582905 >500 0.23258025231105472 16.553566592126828 >1k 0.04296068354790183 8.804830743005223 >5k 0.003333156482164797 2.7899757411386514 >10k+ 0.0027776304018039977 5.685805477109723 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA 32623 0.3183907734115255 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAA 23816 0.23243707383039236 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAA 22804 0.22256025493904383 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAA 21856 0.2133080570052509 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC 21350 0.20836964755957663 No Hit AAAAAAAAAAAAAAAAAAAAAAAAA 18522 0.1807692089975868 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAA 17990 0.17557704728790557 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT 16984 0.16575878661132787 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACA 15087 0.14724463104128024 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTC 14373 0.1402762034835501 No Hit AAAAAAAAAAAAAAAAAAAAAAAA 14262 0.13919287651028955 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAG 14028 0.13690910613422674 No Hit CTAGGCAGGTGCTGGGGGCTTCCGAGACAATC 12163 0.11870726104295695 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 12109 0.11818023711001938 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA 11783 0.11499857410747032 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.08201077978656311 0.0 0.0 0.0 0.0 2 0.1327124340756498 0.0 0.0 0.0 0.0 3 0.17815360873782257 0.0 0.0 0.0 0.0 4 0.24201134194542492 0.0 0.0 0.0 0.0 5 0.2826214638890033 0.0 0.0 0.0 0.0 6 0.3751239238220088 0.0 0.0 0.0 0.0 7 0.4227415121331645 0.0 0.0 0.0 0.0 8 0.48079222237599173 0.0 0.0 0.0 0.0 9 0.5405020820373262 0.0 0.0 0.0 0.0 10 0.5880903912410965 0.0 0.0 0.0 0.0 11 0.6453603252869792 0.0 0.0 0.0 0.0 12 0.694588264504333 0.0 0.0 0.0 0.0 13 0.7489595669190591 0.0 0.0 0.0 0.0 14 0.7997978570426111 0.0 0.0 0.0 0.0 15 0.8585415061602266 0.0 0.0 0.0 0.0 16 0.9086575783016049 0.0 0.0 0.0 0.0 17 0.9735595996726205 0.0 0.0 0.0 0.0 18 1.0129692782133968 0.0 0.0 0.0 0.0 19 1.0610748516476427 0.0 0.0 0.0 0.0 20 1.1100880774108368 0.0 0.0 0.0 0.0 21 1.1486193827300504 0.0 0.0 9.759702461806869E-6 0.0 22 1.1876679522797395 0.0 0.0 9.759702461806869E-6 0.0 23 1.2235738976367272 0.0 0.0 9.759702461806869E-6 0.0 24 1.2645744076787777 0.0 0.0 9.759702461806869E-6 0.0 25 1.3041987996737137 0.0 0.0 9.759702461806869E-6 0.0 26 1.3445258902458996 0.0 0.0 9.759702461806869E-6 0.0 27 1.3795144235714771 0.0 0.0 9.759702461806869E-6 0.0 28 1.4146786315413673 0.0 0.0 9.759702461806869E-6 0.0 29 1.4530342622162684 0.0 0.0 9.759702461806869E-6 0.0 30 1.4878861597073807 0.0 0.0 9.759702461806869E-6 0.0 31 1.5201419763436523 0.0 0.0 9.759702461806869E-6 0.0 32 1.5530419333424033 0.0 0.0 9.759702461806869E-6 0.0 33 1.5853855873008313 0.0 0.0 9.759702461806869E-6 0.0 34 1.6202570041968674 0.0 0.0 9.759702461806869E-6 0.0 35 1.6521126730322049 0.0 0.0 9.759702461806869E-6 0.0 36 1.677878287531375 0.0 0.0 9.759702461806869E-6 0.0 37 1.69551406987986 0.0 0.0 9.759702461806869E-6 0.0 38 1.7119103700156955 0.0 0.0 9.759702461806869E-6 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTCGT 90 0.0 148.11832 44 TTACGTA 15 1.1302576E-4 148.11832 44 CACGCGC 85 0.0 130.69263 44 TGCGCCC 75 0.0 128.3692 44 CGGATCT 85 0.0 104.55411 44 GTCCGTA 80 0.0 92.573944 44 CGCTTTA 205 0.0 87.41906 43 GCCCGCA 50 3.274181E-11 81.92415 43 AACGACA 2345 0.0 81.44378 43 CACGTTA 55 3.794048E-8 80.79181 44 CCCGTCG 90 0.0 79.648476 43 CGTTTAG 95 0.0 77.95701 44 TTAATCG 195 0.0 76.147446 43 TGACACG 195 0.0 75.958115 44 TCGCAAA 465 0.0 69.371254 43 TCGGATA 90 0.0 68.51219 42 ACGAGCG 120 0.0 67.887566 44 CGTTATT 70 9.094947E-12 65.8319 43 GATCTAC 185 0.0 64.05116 44 GTCGCAA 120 0.0 64.00324 43 >>END_MODULE