##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841094.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1656127 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.38572524933172 39.0 35.0 39.0 31.0 39.0 2 37.10564105289027 39.0 35.0 39.0 33.0 39.0 3 37.30207224445952 39.0 35.0 39.0 34.0 39.0 4 37.956865626851084 39.0 35.0 40.0 35.0 41.0 5 38.50547391594968 40.0 36.0 41.0 35.0 41.0 6 38.59374854706191 40.0 36.0 41.0 35.0 41.0 7 38.524421738187954 40.0 36.0 41.0 35.0 41.0 8 38.45912541731401 40.0 36.0 41.0 35.0 41.0 9 38.45830845098232 40.0 36.0 41.0 35.0 41.0 10 38.378719747942036 40.0 36.0 41.0 34.0 41.0 11 38.35219340062688 40.0 36.0 41.0 34.0 41.0 12 38.17075441678084 40.0 35.0 41.0 34.0 41.0 13 38.09960468007586 40.0 35.0 41.0 34.0 41.0 14 38.15407453655426 40.0 35.0 41.0 34.0 41.0 15 38.04270505824734 40.0 35.0 41.0 34.0 41.0 16 38.03770423403519 40.0 35.0 41.0 34.0 41.0 17 38.03254339793989 40.0 35.0 41.0 34.0 41.0 18 38.02216738209086 40.0 35.0 41.0 34.0 41.0 19 38.01850160042074 40.0 35.0 41.0 34.0 41.0 20 37.962435248021436 40.0 35.0 41.0 34.0 41.0 21 37.94606150373733 40.0 35.0 41.0 34.0 41.0 22 37.95380245597107 40.0 35.0 41.0 34.0 41.0 23 37.87640078327326 40.0 35.0 41.0 34.0 41.0 24 37.74096551774109 39.0 35.0 41.0 34.0 41.0 25 37.7229616229487 39.0 35.0 41.0 34.0 41.0 26 37.66744308441388 39.0 35.0 41.0 34.0 41.0 27 37.66404322647093 39.0 35.0 41.0 34.0 41.0 28 37.63685106142053 39.0 35.0 41.0 34.0 41.0 29 37.49521057942129 39.0 35.0 41.0 33.0 41.0 30 37.5136276498208 39.0 35.0 41.0 34.0 41.0 31 37.44151036914525 39.0 35.0 41.0 33.0 41.0 32 37.19008327937904 38.0 35.0 41.0 33.0 41.0 33 37.148943811195934 38.0 35.0 41.0 33.0 41.0 34 37.151068453985175 38.0 35.0 41.0 33.0 41.0 35 37.141286442118165 38.0 35.0 41.0 33.0 41.0 36 37.14912485821482 38.0 35.0 41.0 33.0 41.0 37 37.11901260622116 37.0 35.0 41.0 34.0 41.0 38 36.9510433652769 37.0 35.0 40.0 33.0 41.0 39 36.94468810881705 37.0 35.0 40.0 33.0 41.0 40 36.85675059126596 37.0 35.0 40.0 33.0 41.0 41 36.736451605997246 36.0 35.0 40.0 33.0 41.0 42 36.61961484996679 36.0 35.0 40.0 33.0 41.0 43 36.54731524862501 36.0 35.0 40.0 33.0 41.0 44 36.36145314564023 36.0 35.0 40.0 33.0 41.0 45 36.243990269942685 36.0 35.0 39.0 33.0 41.0 46 35.97027444371288 35.0 35.0 39.0 32.0 41.0 47 35.711540854894835 35.0 35.0 39.0 31.0 41.0 48 35.74305976169866 35.0 34.0 39.0 31.0 41.0 49 35.640186629677004 35.0 34.0 39.0 31.0 41.0 50 36.243831657681284 37.0 34.0 39.0 31.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 0.0 20 4.0 21 13.0 22 45.0 23 93.0 24 250.0 25 585.0 26 1171.0 27 2237.0 28 4487.0 29 8281.0 30 14558.0 31 24917.0 32 40756.0 33 79525.0 34 227762.0 35 84882.0 36 123799.0 37 190493.0 38 237839.0 39 280697.0 40 333732.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 47.04904877464108 19.41028677148552 33.540664453873404 2 22.842571855902357 22.146188064079627 30.61613028469435 24.39510979532367 3 21.675451218415013 21.14554016690749 30.35842058006421 26.820588034613284 4 18.49314696276312 24.56514506435799 34.983548966957244 21.958159005921647 5 15.513846462258027 27.285105550480125 34.09889458960575 23.102153397656096 6 21.78444044448282 26.670478773668925 27.884395339246325 23.660685442601924 7 24.713744779234926 26.375936144993712 25.976087582655193 22.934231493116165 8 25.2675066586077 27.56672646481822 26.154214018610894 21.011552857963185 9 25.600029466339237 24.17332728709815 26.10941069132983 24.117232555232782 10 23.263252153971283 25.25838900036048 28.405973696461682 23.072385149206553 11 27.48835083299771 23.5769358267814 26.287597509128226 22.647115831092666 12 23.85765101347904 26.734664672455676 26.557866637039307 22.849817677025978 13 22.927227199363333 26.470312965128883 25.266721694652645 25.335738140855142 14 19.887846765374878 25.911056338070694 27.209145192367494 26.99195170418694 15 22.61849483765436 30.654170845593363 25.53276409357495 21.19457022317733 16 22.696447796575985 29.484574552555447 24.90286071056145 22.916116940307113 17 23.922621876220845 30.316153290176416 24.03438866705271 21.72683616655003 18 23.57747926336567 26.503643742297538 24.130576942468785 25.788300051868003 19 25.574306801350378 25.019276903280968 21.547683239268487 27.858733056100167 20 22.571397000350817 27.485754413761747 24.661635248987547 25.28121333689989 21 24.57649685078499 29.89625795606255 24.844350704988205 20.68289448816425 22 26.087975137172453 25.979710493217006 23.27846837833089 24.653845991279656 23 24.89899627262885 24.908053549033376 28.585307769271317 21.607642409066454 24 27.788267445672947 27.324595275603862 24.817843076044287 20.0692942026789 25 27.334171203436647 26.00897926941953 25.112027540001996 21.544821987141823 26 23.88604879490076 30.69037367155929 22.528323140798555 22.895254392741396 27 27.145271498711175 29.218953661327586 23.03513922237851 20.60063561758273 28 26.83328982174929 27.41884041104293 21.22765575312261 24.52021401408517 29 26.391752840497517 27.907429425531195 24.868673060219248 20.832144673752033 30 29.637158129584627 26.58520810571048 22.828857549174614 20.94877621553028 31 26.066232635921654 27.756691234279312 25.566838718838003 20.61023741096103 32 24.413167048557515 25.521784621645093 28.668762855550938 21.396285474246454 33 25.027244057218024 25.7871881381026 31.2451497322377 17.940418072441673 34 24.2325903548182 24.372292365378534 29.25598127342638 22.139136006376887 35 21.743441096141673 26.449885812785773 27.087555573774253 24.719117517298304 36 23.68428583893203 26.079050693656747 27.28627519413664 22.950388273274584 37 25.711555515642715 28.361612204348752 24.837019970140204 21.089812309868325 38 24.659079452835122 29.194487743216314 23.977696608736785 22.16873619521178 39 23.584714792423895 29.240832992596218 22.747279644482678 24.427172570497213 40 21.320741446447183 27.40269954027251 25.938761257853056 25.33779775542725 41 22.697618656828254 27.77650912360577 24.055490933483668 25.47038128608231 42 23.101900932319005 26.37943475560159 25.58512019441125 24.933544117668156 43 23.492423290238044 24.93553042747119 28.315614133174993 23.256432149115774 44 26.039453606700746 24.29657168576165 26.76024487436101 22.903729833176598 45 23.433195920825362 24.225385008170715 28.99340313105123 23.348015939952692 46 23.832002008186574 26.77024266432942 26.129414777582348 23.268340549901662 47 22.313815530945572 30.157390884244546 23.969746769326957 23.55904681548293 48 25.132110357206788 26.80767429371535 26.722829405374654 21.33738594370321 49 21.999423537677217 29.761488713948587 22.56976094828052 25.66932680009367 50 18.16665857172924 33.44990043226966 31.199912574675796 17.183528421325303 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 65774.0 1 66043.5 2 47021.5 3 27353.0 4 25715.0 5 17244.5 6 6653.0 7 3381.5 8 3192.0 9 2610.0 10 2556.5 11 3233.5 12 3647.0 13 3944.5 14 4676.0 15 5125.5 16 5199.5 17 5481.5 18 6141.0 19 7518.0 20 8877.0 21 9405.5 22 9358.5 23 9991.5 24 11862.5 25 13481.5 26 17110.0 27 24081.0 28 27271.0 29 22677.0 30 18430.0 31 24039.0 32 37635.0 33 46181.0 34 46663.0 35 44976.5 36 45264.0 37 47968.0 38 50688.5 39 54711.5 40 59365.5 41 70635.0 42 83980.0 43 85965.0 44 85151.0 45 86023.5 46 89840.5 47 100983.0 48 118893.5 49 139703.5 50 155365.5 51 155909.5 52 160996.0 53 172949.5 54 167660.0 55 156548.5 56 146405.0 57 139768.5 58 130746.5 59 108912.0 60 87597.0 61 71088.0 62 56957.5 63 48367.0 64 41787.0 65 34145.5 66 22878.5 67 13880.5 68 9749.0 69 7084.5 70 5668.5 71 4030.5 72 2816.0 73 1832.0 74 929.5 75 613.5 76 436.5 77 260.5 78 142.0 79 117.5 80 101.0 81 72.5 82 33.5 83 10.5 84 1.5 85 0.5 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 15459.0 25 16113.0 26 15726.0 27 19214.0 28 22724.0 29 19192.0 30 26455.0 31 36963.0 32 30753.0 33 8309.0 34 5916.0 35 6678.0 36 7297.0 37 6889.0 38 4837.0 39 6029.0 40 6263.0 41 7152.0 42 9784.0 43 17959.0 44 56248.0 45 127010.0 46 162704.0 47 204847.0 48 260496.0 49 308042.0 50 247068.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.3579656701567435 #Duplication Level Percentage of deduplicated Percentage of total 1 68.05260696192222 5.007287457904935 2 11.770424962539034 1.7321276559503636 3 4.908223022100964 1.0834360949427562 4 2.7608438660132038 0.812567775471519 5 1.7506876685016646 0.6440749882000998 6 1.1551045191537899 0.5099531638425899 7 0.8489169065588357 0.4372411018692901 8 0.6454249163220975 0.37992115015694256 9 0.49949211455632603 0.3307721248277502 >10 4.40119210429914 6.740902472523101 >50 0.8722331705934054 4.573186651218598 >100 1.6669159732468617 30.651118581643022 >500 0.505328203995797 25.918835224358688 >1k 0.15343298603172714 16.401195370281005 >5k 0.008338749240854737 4.153694102290154 >10k+ 8.338749240854736E-4 0.6236860845191795 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 10165 0.6137814310134427 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAA 8484 0.5122795534400442 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAA 8163 0.49289698193435644 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAA 7886 0.47617121150733005 No Hit AAAAAAAAAAAAAAAAAAAAAAAAA 6929 0.4183857880464481 No Hit TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTTTCCG 6838 0.41289104036103513 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 6408 0.38692684800139115 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA 6073 0.3666989306979477 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAA 6039 0.3646459480462549 No Hit CCTTTCGGCCGGAACCGCCATCTTCCAGTAATTCGCCAAAATGACGAAC 5623 0.3395271014843668 No Hit AAAAAAAAAAAAAAAAAAAAAAAA 5255 0.3173065833719274 No Hit CGGCACAGCTGGTTTGAGCAACTGAACTGGAAACAAGATGCAGGACCC 4524 0.27316745636053275 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3867 0.2334965857087047 No Hit TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTTTC 3564 0.2152008873715603 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC 3490 0.21073263101199363 No Hit CTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTT 3420 0.2065059020232144 No Hit CCTTTCCGGCGGTGACGACCTACGCACACGAGAACATGCCTCTCGCAAA 3171 0.19147082319169967 No Hit CCTTTCGGCCGGAACCGCCATCTTCCAGTAATTCGCCAAAATGACGA 3095 0.18688180314673936 No Hit CGGCACAGCTGGTTTGAGCAACTGAACTGGAAACAAGATGCAGGACCCC 3056 0.18452691128156234 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCTA 3032 0.18307774705683802 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT 2927 0.17673765357366916 No Hit CTCTTTTTCCGGCTGGAACCATGGAGGG 2893 0.1746846709219764 No Hit CGGCACAGCTGGTTTGAGCAACTGAACTGGAAACAAGATGCAGGAC 2537 0.1531887349218991 No Hit CACCAAGATGGCCGCCCCCGTGGATCTAGAGCTGAAGAAGGCCTTCAC 2491 0.15041117015784417 No Hit CTCTCGGCCTTAGCGCCATTTTTTTGGAAACCTCTGCGCCATGAGAGCC 2399 0.1448560406297343 No Hit AGAGAGTGGGGACGTCCGGCTTCGGAGCGGGAGTGTTCGTTGTGCCAGC 2248 0.13573838238251051 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2222 0.1341684544723925 No Hit CTCTTCCCTTTTGCGGCCATCACCGAAGCGGGAGCGGCCAAAATGAAGT 2214 0.13368539973081775 No Hit CTCTTTTTCCGGCTGGAACCATGGAGGGTGTAGAAGAGAAGAAGAAGGA 2194 0.13247776287688082 No Hit ACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2176 0.1313908897083376 No Hit CCTTTCGGCCGGAACCGCCATCTTCCAGTAATTCGCCAAAATGACGAACA 2131 0.1286737067869795 No Hit ACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2110 0.12740568809034575 No Hit ACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2018 0.12185055856223587 No Hit AGACGGAAGTGAGCGACACACTCTGCGTCCTCGCCTCACCAGGAAACTA 2004 0.12100521276448002 No Hit TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTT 1949 0.11768421141615348 No Hit TCTGCACTTCGGCTGCTCTCGGGTTAGCACCCTATGGTGCCTTCTCTT 1943 0.1173219203599724 No Hit CCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCTAG 1927 0.11635581087682284 No Hit CCCTTTCGGCCGGAACCGCCATCTTCCAGTAATTCGCCAAAATGACGAA 1923 0.11611428350603546 No Hit AAGATAAAATTTGAAATCTGGTTAGGCTGGTGTTAGGGTTCTTTGTTTTT 1834 0.11074029950601613 No Hit TAAAAAAAAAAAAAAAAAAAAAAAAAAA 1831 0.1105591539779256 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA 1819 0.10983457186556345 No Hit CTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATT 1816 0.10965342633747291 No Hit ACTTTTTTTTTTTTTTTTTTTTTTTTTT 1810 0.10929113528129185 No Hit CCTTTCCGGCGGTGACGACCTACGCACACGAGAACATGCCTCTCGCA 1803 0.10886846238241392 No Hit CCCTTTTGGCTCTCTGACCAGCACCATGGCGGTTGGCAAGAACAAGCGC 1771 0.10693624341611484 No Hit CCTTTCGGCCGGAACCGCCATCTTCCAGTAATTCGCCAAAATGAC 1769 0.10681547973072113 No Hit TCTTCCTAGCACATCAGGGACAACTGCCAGTGTGGTCATCATTCGGGG 1751 0.1057286065621779 No Hit ACCCAGCGAACAATGAACCCTCTCTACTCATTTTCCTGTTCCTCTAAAT 1728 0.10433982418015045 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTC 1685 0.10174340494418603 No Hit TAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1682 0.10156225941609551 No Hit CCATCAGCAAGCTCCAGTGCTACGTGTCCCTGGCATTTTAGGTGTCGG 1669 0.1007772954610365 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.08362885213513215 0.0 0.0 0.0 0.0 2 0.13887823820274653 0.0 0.0 0.0 0.0 3 0.18935745869731005 0.0 0.0 0.0 0.0 4 0.2475655550570699 0.0 0.0 0.0 0.0 5 0.29351613734936993 0.0 0.0 0.0 0.0 6 0.4120456945632793 0.0 0.0 0.0 0.0 7 0.4614984237319964 0.0 0.0 0.0 0.0 8 0.517834682968154 0.0 0.0 0.0 0.0 9 0.5791826351481498 0.0 0.0 0.0 0.0 10 0.6227783255752729 0.0 0.0 0.0 0.0 11 0.6749482376653482 0.0 0.0 0.0 0.0 12 0.7230725662947346 0.0 0.0 0.0 0.0 13 0.7728875865196329 0.0 0.0 0.0 0.0 14 0.8137660940253978 0.0 0.0 0.0 0.0 15 0.8585694213064577 0.0 0.0 0.0 0.0 16 0.8991460195987385 0.0 0.0 0.0 0.0 17 0.9507724951045421 0.0 0.0 0.0 0.0 18 0.9848882362282603 0.0 0.0 0.0 0.0 19 1.0217815421160334 0.0 0.0 0.0 0.0 20 1.0645318867454006 0.0 0.0 0.0 0.0 21 1.095809681262367 0.0 0.0 0.0 0.0 22 1.1219550191501013 0.0 0.0 0.0 0.0 23 1.1534139591951584 0.0 0.0 0.0 0.0 24 1.1889788645436008 0.0 0.0 0.0 0.0 25 1.2180829127234807 0.0 0.0 0.0 0.0 26 1.248273834071904 0.0 0.0 0.0 0.0 27 1.275385281442788 0.0 0.0 0.0 0.0 28 1.3027986380271561 0.0 0.0 0.0 0.0 29 1.3323253591059139 0.0 0.0 0.0 0.0 30 1.3592556609487074 0.0 0.0 0.0 0.0 31 1.3873332178027409 0.0 0.0 0.0 0.0 32 1.4145654288590186 0.0 0.0 0.0 0.0 33 1.4456620778478946 0.0 0.0 0.0 0.0 34 1.4808646921401558 0.0 0.0 0.0 0.0 35 1.5078553758256463 0.0 0.0 0.0 0.0 36 1.5289890207695425 0.0 0.0 0.0 0.0 37 1.5435410448594824 0.0 0.0 0.0 0.0 38 1.5559797044550328 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTGCACA 45 0.0 261.8122 44 CGTGACT 15 1.1647371E-5 261.8122 44 GCTATGT 10 0.0012095904 261.8122 44 TGTATAC 25 1.0822987E-9 261.8122 44 GATAGTA 15 1.1647371E-5 261.8122 44 GATGTCA 65 0.0 261.81216 44 GCACGGG 115 0.0 261.81216 44 GGTCAAT 85 0.0 261.81216 44 TGTTAAC 65 0.0 261.81216 44 CTCATGA 165 0.0 245.94478 44 TCGTGAC 75 0.0 244.35803 44 TACTAGT 75 0.0 244.35803 44 ACGAACA 155 0.0 236.47552 44 ACATAGC 90 0.0 232.72194 44 GTAAAGG 90 0.0 232.72194 44 ACCTGGA 115 0.0 227.66277 44 CCATTAC 25 3.406858E-7 209.44975 44 TGTACCA 145 0.0 207.64415 44 TAAATCT 160 0.0 204.54077 44 CTATCAT 835 0.0 202.23817 44 >>END_MODULE