##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841089.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 18866042 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 37.42023907293326 39.0 37.0 39.0 35.0 39.0 2 37.938928048607124 39.0 38.0 39.0 35.0 39.0 3 38.17868856647303 39.0 38.0 39.0 35.0 40.0 4 38.62836402039177 39.0 38.0 41.0 35.0 41.0 5 39.23168473811306 40.0 39.0 41.0 35.0 41.0 6 39.291671035185864 40.0 39.0 41.0 35.0 41.0 7 39.269286848826056 40.0 39.0 41.0 35.0 41.0 8 39.18665112692954 40.0 38.0 41.0 35.0 41.0 9 39.205384892072225 40.0 39.0 41.0 35.0 41.0 10 39.125675857182976 40.0 39.0 41.0 35.0 41.0 11 39.02738088890081 40.0 38.0 41.0 35.0 41.0 12 38.986582877320004 40.0 38.0 41.0 35.0 41.0 13 38.93210271661645 40.0 38.0 41.0 35.0 41.0 14 38.92648844945855 40.0 38.0 41.0 35.0 41.0 15 38.91991828492696 40.0 38.0 41.0 35.0 41.0 16 39.0006230771669 40.0 38.0 41.0 35.0 41.0 17 39.041270341707076 40.0 38.0 41.0 35.0 41.0 18 39.03191024381267 40.0 38.0 41.0 35.0 41.0 19 39.057654170387195 40.0 39.0 41.0 35.0 41.0 20 39.04485530139284 40.0 38.0 41.0 35.0 41.0 21 39.106437693714454 40.0 38.0 41.0 35.0 41.0 22 39.12946944568447 40.0 38.0 41.0 35.0 41.0 23 39.093089265888416 40.0 38.0 41.0 35.0 41.0 24 39.02880747323683 40.0 38.0 41.0 35.0 41.0 25 39.03218404810908 40.0 38.0 41.0 35.0 41.0 26 39.05366376017212 40.0 38.0 41.0 35.0 41.0 27 38.97424036231241 40.0 38.0 41.0 35.0 41.0 28 38.89592203244971 40.0 38.0 41.0 35.0 41.0 29 38.8707941521701 40.0 38.0 41.0 35.0 41.0 30 38.87920599555659 40.0 38.0 41.0 35.0 41.0 31 38.75907880562781 40.0 38.0 41.0 35.0 41.0 32 38.68633574179568 40.0 38.0 41.0 35.0 41.0 33 38.517388109892096 40.0 38.0 41.0 34.0 41.0 34 38.56304233106781 40.0 37.0 41.0 34.0 41.0 35 38.58511077034004 40.0 37.0 41.0 34.0 41.0 36 38.62508307213503 40.0 37.0 41.0 35.0 41.0 37 38.577269349151194 40.0 37.0 41.0 35.0 41.0 38 38.50601261847125 40.0 37.0 41.0 34.0 41.0 39 38.516887953034676 40.0 37.0 41.0 34.0 41.0 40 38.42053133747318 40.0 37.0 41.0 34.0 41.0 41 38.377274913705115 40.0 37.0 41.0 34.0 41.0 42 38.280269354473226 40.0 36.0 41.0 34.0 41.0 43 38.21365638481109 40.0 36.0 41.0 34.0 41.0 44 38.069126149416824 40.0 36.0 41.0 34.0 41.0 45 37.93899813244135 39.0 36.0 41.0 34.0 41.0 46 37.62970180455796 39.0 35.0 41.0 33.0 41.0 47 37.461092082049724 39.0 35.0 41.0 33.0 41.0 48 37.459489907322684 39.0 35.0 41.0 33.0 41.0 49 37.60457927153208 39.0 36.0 40.0 33.0 41.0 50 37.36136268072581 38.0 36.0 40.0 33.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 14.0 21 43.0 22 86.0 23 309.0 24 729.0 25 1721.0 26 3625.0 27 8259.0 28 17871.0 29 36945.0 30 74191.0 31 139143.0 32 246906.0 33 450908.0 34 903768.0 35 713033.0 36 1041229.0 37 1598357.0 38 2478280.0 39 4197309.0 40 6953313.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 50.42995239807057 17.497888534330624 32.07215906759881 2 25.91654359722087 21.257686164379365 31.797872600940885 21.02789763745888 3 26.318281280196448 21.903428392664452 25.18875978331862 26.589530543820477 4 20.62758049621643 25.06202413839638 29.630746078059193 24.679649287327994 5 16.96280014642181 26.81102374308294 29.741484726897145 26.484691383598108 6 22.48184860396261 24.69359497874541 27.858853489248038 24.965702928043942 7 22.902514475479276 22.405356672056598 27.77220044352705 26.91992840893707 8 19.986704153420202 23.84667117777009 30.085287629487944 26.08133703932176 9 21.139659288365838 27.45544083915429 29.02437087757994 22.380528994899937 10 28.231305750299928 21.496459087709017 28.963600314257754 21.3086348477333 11 22.208913772162703 21.784357312466494 28.630048634472455 27.37668028089835 12 21.425135171436597 23.406091219345317 29.513752805172384 25.6550208040457 13 22.197310914499184 24.943578520603317 27.0948988664395 25.764211698458002 14 18.434486682474258 25.545723899056306 25.62797220529881 30.391817213170626 15 20.454306207947592 30.345856327469217 28.17141507476767 21.02842238981552 16 20.88026730779037 31.050487431332975 25.92748388877752 22.14176137209914 17 22.819767919524402 34.942215224581815 21.740352321912567 20.497664533981215 18 20.603054949204502 28.230060126019012 24.579628307834785 26.5872566169417 19 25.291521136229843 23.403631773956615 24.969567013579212 26.335280076234323 20 23.098522732007062 23.288218058668587 28.29589269439769 25.317366514926658 21 20.979747633340367 29.950680699216083 26.039600675117757 23.029970992325786 22 24.579787323700437 25.9944454698023 24.274111125163405 25.151656081333858 23 26.329921241561955 23.945170905481923 29.39762881901779 20.327279033938332 24 20.954798044020045 27.109427616030963 24.88404828103319 27.051726058915804 25 20.903942186761668 24.044348165605275 29.092261809823842 25.959447837809215 26 22.913775215087757 30.913173816254535 27.9968904631757 18.17616050548201 27 25.354074948178123 25.14505020437161 24.154438410905207 25.346436436545055 28 23.911975106986667 23.934324518829836 26.348662423679336 25.80503795050416 29 24.660445498353656 27.997274385125497 26.2763888892634 21.065891227257445 30 25.08491213899029 27.851219526868025 26.974173019529264 20.08969531461242 31 23.675089336971087 28.598863927726693 24.842852543545433 22.883194191756782 32 22.495395821661827 28.491727417035467 25.68184786282015 23.331028898482558 33 20.944560777132303 24.04658753275714 31.867165874885924 23.141685815224637 34 21.337783882213394 29.94979377067153 26.193392658322306 22.51902968879277 35 18.722567774639074 25.620398827634443 27.50846539575037 28.14856800197611 36 22.363153232544004 24.77531108450819 28.3971159655244 24.464419717423404 37 18.907187874503176 30.73877819640707 24.19745891062504 26.15657501846471 38 24.079843637288878 25.62569857950418 25.058024050473886 25.236433732733055 39 21.931937377634085 29.418309926511615 26.96568464772383 21.684068048130474 40 17.75091761530085 25.56879241076373 29.871626013324686 26.80866396061073 41 19.740249499110266 30.570917185083385 24.688878518513075 24.999954797293274 42 20.183147223339603 31.473779189289996 25.35326352671558 22.98981006065482 43 18.492898147927825 24.64549638045732 26.126920883183963 30.734684588430895 44 19.044202944066036 28.227142202129546 23.45321637670849 29.27543847709593 45 18.313418275548543 25.684129540908657 30.35740774581856 25.645044437724234 46 17.973971128226967 29.234480676502766 29.56738238025096 23.224165815019308 47 21.65187781294439 29.284693365718212 28.774326308979216 20.28910251235818 48 22.929070558149455 27.64513848442689 23.564085672149808 25.861705285273846 49 17.740192904584305 29.693024810743925 25.071830454205646 27.494951830466125 50 18.73040721932917 30.992269625125335 28.570495196817287 21.70682795872821 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 36391.0 1 46553.5 2 126428.5 3 193641.5 4 179096.0 5 112726.5 6 42117.0 7 30037.5 8 37643.0 9 40271.5 10 37144.5 11 31211.0 12 25081.5 13 20110.5 14 17492.0 15 17012.5 16 17429.0 17 20162.0 18 23823.5 19 26492.0 20 30351.5 21 41044.0 22 52987.5 23 67956.0 24 84469.0 25 97323.5 26 116979.0 27 152651.0 28 192661.0 29 230258.0 30 291442.0 31 446925.5 32 686633.0 33 738596.5 34 671526.5 35 751163.5 36 821294.0 37 819432.5 38 855545.5 39 939855.5 40 1031606.0 41 1137253.5 42 1305969.0 43 1478663.5 44 1540356.0 45 1571501.0 46 1621163.5 47 1588246.5 48 1731316.5 49 2047468.5 50 2336478.0 51 2400984.0 52 2024957.5 53 1610260.5 54 1359782.5 55 1158415.0 56 1027703.5 57 946604.5 58 858995.0 59 728040.0 60 585192.0 61 462592.5 62 366929.0 63 286426.0 64 229722.0 65 194179.5 66 131024.0 67 73118.0 68 47539.0 69 34677.5 70 25510.5 71 19850.0 72 15327.0 73 10156.0 74 6404.5 75 4273.0 76 3085.5 77 2411.0 78 2281.5 79 2655.5 80 3210.5 81 2866.0 82 1971.0 83 938.0 84 209.0 85 123.0 86 103.5 87 78.0 88 57.5 89 55.5 90 47.5 91 33.0 92 26.0 93 26.0 94 16.0 95 6.0 96 6.0 97 6.0 98 3.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 56786.0 25 46333.0 26 55090.0 27 85419.0 28 79809.0 29 91474.0 30 206165.0 31 304197.0 32 279735.0 33 67998.0 34 59597.0 35 59168.0 36 76221.0 37 101343.0 38 45682.0 39 51824.0 40 54210.0 41 66381.0 42 100222.0 43 197922.0 44 735990.0 45 1490330.0 46 2103891.0 47 2366558.0 48 3371363.0 49 3620634.0 50 3091700.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.577293696485611 #Duplication Level Percentage of deduplicated Percentage of total 1 68.06386089241954 5.838037249910235 2 12.845934867262244 2.203667123248663 3 5.5276939080499305 1.4223796234085573 4 2.842644801375434 0.9752879734474039 5 1.7317548510450003 0.742688498386333 6 1.1439750370557609 0.5887325924565162 7 0.8067878964380437 0.4844039716963242 8 0.6229304270980847 0.4274445780557992 9 0.4948792112330914 0.3820251905128229 >10 3.7831865815048062 6.31622464889494 >50 0.4659174996091944 2.8446580907931245 >100 1.2989426870913605 30.726020147898915 >500 0.28000260076418926 15.483447015959323 >1k 0.07889346635471468 12.517789011130576 >5k 0.007474117865183497 4.286241092905279 >10k+ 0.005121154833551655 14.760953191295206 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA 207476 1.0997325247129206 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT 110223 0.5842401919809147 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC 91445 0.4847068611423636 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTC 79546 0.4216358682971235 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAG 60805 0.32229865702620614 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATG 54563 0.2892127559135085 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA 51847 0.2748165195434209 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACT 43900 0.23269321673300633 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCC 37019 0.1962202776819854 No Hit TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACC 32856 0.1741541760587621 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAA 31415 0.16651611397875613 No Hit TTGAGTTCCAGCCAGGAGGACCAGGGGCTGGGTTGGG 30155 0.15983744762149898 No Hit CCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCT 29880 0.15837980218638334 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACA 27807 0.1473918058700389 No Hit ACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21722 0.11513808778757093 No Hit ACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21666 0.11484125817169283 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTA 21583 0.11440131427673064 No Hit ACTTTTTTTTTTTTTTTTTTTTTTTTTTT 21346 0.11314508893810371 No Hit AATGCCCCAACTAAATACTACCGTATGGCCCACCATAATTACCCCCAT 20788 0.11018739383703269 No Hit TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAA 20115 0.10662013791764059 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.020788674169176555 0.0 0.0 0.0 0.0 2 0.03216360909193354 0.0 0.0 0.0 0.0 3 0.0457859682491961 0.0 0.0 0.0 0.0 4 0.07838952123609182 0.0 0.0 0.0 0.0 5 0.09552083049534184 0.0 0.0 0.0 0.0 6 0.14923638991156704 0.0 0.0 0.0 0.0 7 0.16970703234944565 0.0 0.0 0.0 0.0 8 0.19980873571679741 0.0 0.0 0.0 0.0 9 0.2339123383696485 0.0 0.0 0.0 0.0 10 0.2564024823012691 0.0 0.0 0.0 0.0 11 0.2801647531580816 0.0 0.0 0.0 0.0 12 0.3071020407990187 0.0 0.0 0.0 0.0 13 0.33148447353186217 0.0 0.0 0.0 0.0 14 0.35544816448516336 0.0 0.0 0.0 0.0 15 0.38241195477037526 0.0 0.0 0.0 0.0 16 0.4103987471245956 0.0 0.0 0.0 0.0 17 0.4412796282336274 0.0 0.0 0.0 0.0 18 0.4681957137591446 0.0 0.0 0.0 0.0 19 0.49497928606328767 0.0 0.0 0.0 0.0 20 0.523904272024837 0.0 0.0 0.0 0.0 21 0.5504281184150868 0.0 0.0 0.0 0.0 22 0.5735861289824331 0.0 0.0 0.0 0.0 23 0.5987318378703916 0.0 0.0 0.0 0.0 24 0.6238563446429304 0.0 0.0 0.0 5.300528854965975E-6 25 0.646818235642643 0.0 0.0 0.0 5.300528854965975E-6 26 0.6757167189599175 0.0 0.0 0.0 5.300528854965975E-6 27 0.6978888311602401 0.0 0.0 0.0 5.300528854965975E-6 28 0.7269092266411789 0.0 0.0 0.0 5.300528854965975E-6 29 0.7537034000030319 0.0 0.0 0.0 5.300528854965975E-6 30 0.7800735310564876 0.0 0.0 0.0 5.300528854965975E-6 31 0.8051185298962019 0.0 0.0 0.0 5.300528854965975E-6 32 0.83032784513042 0.0 0.0 0.0 5.300528854965975E-6 33 0.8567668830589903 0.0 0.0 0.0 5.300528854965975E-6 34 0.8859303928190131 0.0 0.0 0.0 5.300528854965975E-6 35 0.9093004245405581 0.0 0.0 0.0 5.300528854965975E-6 36 0.9304813378450022 0.0 0.0 0.0 5.300528854965975E-6 37 0.9451213985424182 0.0 0.0 0.0 5.300528854965975E-6 38 0.9570528889949466 0.0 0.0 0.0 5.300528854965975E-6 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGTG 70 0.0 245.35657 44 ACTTCTA 27750 0.0 137.35547 44 CTATCAT 31335 0.0 136.71375 44 ATCGACA 130 0.0 132.11507 44 ACGGTTA 85 0.0 129.89465 44 AATCGCA 1490 0.0 117.73822 44 TAGCGTG 335 0.0 113.523186 44 GAACACA 13825 0.0 100.62724 44 ACCACTC 4100 0.0 94.55204 44 CCTTAGC 49275 0.0 90.75254 43 CCAGGCG 1550 0.0 84.68759 44 CGCGTCA 260 0.0 82.59513 43 CCCATAC 12300 0.0 79.49153 44 GCGATAT 50 1.4097168E-9 79.11745 43 CATGACC 3785 0.0 78.76042 44 CACGCGT 105 0.0 75.349945 43 TCCGGGC 4155 0.0 75.213936 43 GACTCGT 245 0.0 75.10915 44 TCGTAAC 95 0.0 71.38416 43 TTGCGTA 145 0.0 70.010376 42 >>END_MODULE