##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841085.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5512743 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 37.41672521283869 39.0 37.0 39.0 35.0 39.0 2 37.90319628540637 39.0 38.0 39.0 35.0 39.0 3 38.10006923957819 39.0 38.0 39.0 35.0 39.0 4 38.72706599963031 39.0 38.0 41.0 35.0 41.0 5 39.31018931954564 40.0 39.0 41.0 35.0 41.0 6 39.33817593165507 40.0 39.0 41.0 36.0 41.0 7 39.30085403945005 40.0 39.0 41.0 35.0 41.0 8 39.23860245253588 40.0 39.0 41.0 35.0 41.0 9 39.1895807586169 40.0 39.0 41.0 35.0 41.0 10 39.213926352090056 40.0 39.0 41.0 35.0 41.0 11 39.13738460145884 40.0 39.0 41.0 35.0 41.0 12 39.01784338577002 40.0 38.0 41.0 35.0 41.0 13 38.969987536150335 40.0 38.0 41.0 35.0 41.0 14 38.9629902935798 40.0 38.0 41.0 35.0 41.0 15 38.91024159842024 40.0 38.0 41.0 35.0 41.0 16 38.94030993282291 40.0 38.0 41.0 35.0 41.0 17 38.95076280537656 40.0 38.0 41.0 35.0 41.0 18 38.95157691914896 40.0 38.0 41.0 35.0 41.0 19 38.927424695836535 40.0 38.0 41.0 35.0 41.0 20 38.97754693081103 40.0 38.0 41.0 35.0 41.0 21 39.00244814604998 40.0 38.0 41.0 35.0 41.0 22 39.00054691466662 40.0 38.0 41.0 35.0 41.0 23 38.93968356587637 40.0 38.0 41.0 35.0 41.0 24 38.86651436499035 40.0 38.0 41.0 35.0 41.0 25 38.87306601626669 40.0 38.0 41.0 35.0 41.0 26 38.80779918813248 40.0 38.0 41.0 35.0 41.0 27 38.75393186082053 40.0 38.0 41.0 35.0 41.0 28 38.728416672454884 40.0 38.0 41.0 35.0 41.0 29 38.71753586380233 40.0 38.0 41.0 35.0 41.0 30 38.749118537174624 40.0 38.0 41.0 35.0 41.0 31 38.66133563901707 40.0 38.0 41.0 35.0 41.0 32 38.52741763729479 40.0 38.0 41.0 35.0 41.0 33 38.41469980751487 40.0 37.0 41.0 34.0 41.0 34 38.437106322105386 40.0 37.0 41.0 34.0 41.0 35 38.41190914460969 40.0 37.0 41.0 34.0 41.0 36 38.379353494447706 40.0 37.0 41.0 34.0 41.0 37 38.348765709179034 40.0 37.0 41.0 34.0 41.0 38 38.25080733863506 40.0 36.0 41.0 34.0 41.0 39 38.21340321554204 40.0 36.0 41.0 34.0 41.0 40 38.10407105170261 40.0 36.0 41.0 34.0 41.0 41 38.06058795220624 39.0 36.0 41.0 34.0 41.0 42 37.95637699885689 39.0 35.0 41.0 34.0 41.0 43 37.82567198477396 39.0 35.0 41.0 34.0 41.0 44 37.648923542087694 39.0 35.0 41.0 34.0 41.0 45 37.4145102448627 39.0 35.0 41.0 33.0 41.0 46 37.19299763965382 39.0 35.0 41.0 33.0 41.0 47 36.90276960769792 38.0 35.0 40.0 32.0 41.0 48 36.94644008691659 38.0 35.0 40.0 32.0 41.0 49 36.710067926558615 38.0 35.0 40.0 32.0 41.0 50 36.65977034498286 38.0 35.0 40.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 7.0 20 19.0 21 96.0 22 176.0 23 325.0 24 549.0 25 989.0 26 1795.0 27 3527.0 28 6887.0 29 13504.0 30 25054.0 31 46430.0 32 81202.0 33 146758.0 34 256405.0 35 218769.0 36 339663.0 37 572387.0 38 785044.0 39 1210731.0 40 1802425.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 48.12674924261842 20.107920866254787 31.765329891126793 2 24.607060405319096 23.268434606873566 29.932249698562043 22.1922552892453 3 20.783410363951305 22.657722299044234 30.770888466957373 25.78797887004709 4 20.847788478439863 22.48374357375267 33.75183642698381 22.916631520823664 5 17.73008464207383 25.109260489741676 33.06863751856381 24.092017349620686 6 21.304058614740427 26.817811024384774 29.490291856522244 22.38783850435255 7 25.586645341529618 26.126685027762043 25.172024162925787 23.114645467782555 8 24.07126542993207 25.319809031547454 26.433954929515124 24.174970609005353 9 23.300723432962503 26.681182126574736 26.917380331352287 23.100714109110474 10 24.395024400738436 22.587938527154268 27.65146135054727 25.36557572156003 11 26.17473733130676 23.675999407191664 26.57551785018819 23.57374541131339 12 23.10220157188536 26.893925582962964 26.5615320721463 23.44234077300538 13 25.18880346861807 25.768533015233974 25.934113017784433 23.10855049836352 14 21.986296114293737 27.97830408564303 24.18560052590879 25.849799274154446 15 22.297103275084655 30.13245856010338 25.978682481661124 21.591755683150836 16 24.619014526887977 30.23465813661185 23.77279332629872 21.373534010201457 17 23.852608402024185 31.674884898497897 22.277040667413665 22.195466032064257 18 23.431021544084317 29.179321437621887 21.716503018551744 25.673153999742055 19 23.345528714108386 27.359084216332956 24.026115492777368 25.26927157678129 20 25.88845516651148 25.03653807188182 25.751136956683812 23.323869804922882 21 24.853997365739705 28.183301851727897 23.111017509795033 23.851683272737365 22 24.347969785640288 28.78325726412423 24.147379988510256 22.721392961725225 23 26.279222521347357 26.882533794882146 25.32936870084457 21.508874982925924 24 25.330166851601827 28.610874840347172 24.304670107059227 21.754288200991777 25 25.5412728222987 27.285458762750253 25.604847352718245 21.568421062232808 26 25.59033766350161 29.562108343157373 24.870555008772303 19.976998984568713 27 26.502492219907413 28.021673247212675 25.387376452869848 20.088458080010067 28 24.049163994751023 27.918008225989915 26.02908896452159 22.003738814737474 29 25.214655266618685 27.84084271928073 23.43527558699068 23.50922642710991 30 27.220799785925028 28.76892826435827 23.872343353146924 20.137928596569783 31 24.4796720212361 28.207093556850715 24.992985574338096 22.320248847575087 32 23.833554100564395 27.812421049151993 26.550348702038225 21.803676148245394 33 24.435938061085338 24.568761011417127 29.052276605796823 21.94302432170071 34 23.156869276574497 27.648604264672567 26.129929561396615 23.064596897356328 35 22.787973480968937 25.000186676994108 27.761835674599194 24.45000416743776 36 23.46454120745397 25.224744534333706 27.607131841885874 23.70358241632646 37 21.811847115475636 27.093775159878142 26.049953840688794 25.04442388395742 38 22.793122683766065 26.303641968149115 26.217625398555374 24.685609949529447 39 21.872995878525792 28.432179554508103 25.861670905527884 23.833153661438224 40 18.692575638644936 27.31667016652382 27.93557817399779 26.05517602083346 41 20.84817875568573 28.377547905012758 25.59760306757673 25.176670271724788 42 22.198530833292924 29.64491981681095 24.912778761990122 23.243770587906003 43 22.54718119641072 26.164895128220383 27.498200246559932 23.789723428808962 44 23.597942344436856 27.847241034746045 24.536152053522105 24.018664567294994 45 21.575279155459576 26.69067060988833 28.19189757847498 23.542152656177116 46 21.641075887817586 26.58531698520752 26.044514272031122 25.729092854943776 47 22.35393096280171 28.110698539711663 28.092670288680544 21.44270020880608 48 22.959446630559313 29.092444381526704 24.96721420515033 22.980894782763652 49 18.838261273133973 28.747447812678562 25.597546819834697 26.816744094352767 50 19.57904919153762 28.46659590461657 27.155591929314195 24.79876297453162 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 157656.0 1 155401.0 2 110074.5 3 65321.5 4 60775.0 5 42844.0 6 18594.5 7 9689.0 8 9644.5 9 9115.0 10 9421.0 11 9873.5 12 9360.5 13 8712.0 14 9385.0 15 9981.0 16 9524.5 17 9657.0 18 11187.0 19 14788.0 20 19095.5 21 24184.0 22 29993.0 23 34161.5 24 36781.0 25 42333.0 26 53423.5 27 63438.5 28 65458.5 29 68303.0 30 80513.0 31 101324.5 32 131271.5 33 151924.5 34 165946.0 35 182259.0 36 190250.5 37 201123.5 38 216649.0 39 223070.0 40 233586.5 41 264457.0 42 305196.0 43 344627.0 44 361999.5 45 368556.5 46 418445.0 47 458766.5 48 481854.5 49 521815.5 50 552312.5 51 558379.0 52 534298.5 53 508891.5 54 475954.0 55 433738.0 56 390947.5 57 351741.0 58 335745.0 59 321242.0 60 267329.0 61 199266.5 62 159020.0 63 127439.5 64 98604.5 65 85711.0 66 61138.0 67 33794.5 68 22675.5 69 16276.5 70 12941.0 71 9939.0 72 6407.0 73 3537.0 74 1717.0 75 1146.5 76 800.5 77 562.0 78 360.0 79 221.5 80 146.5 81 66.5 82 37.0 83 22.5 84 17.5 85 12.0 86 6.0 87 4.5 88 4.5 89 4.0 90 3.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 30988.0 25 36778.0 26 40157.0 27 49112.0 28 48128.0 29 45872.0 30 65274.0 31 114158.0 32 89163.0 33 18710.0 34 19320.0 35 20369.0 36 22379.0 37 23742.0 38 15822.0 39 20192.0 40 21404.0 41 25866.0 42 32433.0 43 55274.0 44 179181.0 45 445801.0 46 548183.0 47 733006.0 48 863592.0 49 1108406.0 50 839433.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.96272414745772 #Duplication Level Percentage of deduplicated Percentage of total 1 72.15260751050252 7.909891326574253 2 11.360283613518538 2.4907931098377585 3 4.48038542782757 1.4735168855868896 4 2.3758950648356767 1.0418512879639878 5 1.4526278530219203 0.7962379220796536 6 0.9873348158985085 0.649432753672578 7 0.6826137397310651 0.5238314289555316 8 0.5280002907734694 0.4630657230021609 9 0.41420726077057046 0.4086755945731664 >10 3.462171885918853 7.7745416833335135 >50 0.5380472419762704 4.210608921874522 >100 1.2565386447618925 36.43191506235644 >500 0.24355091178872765 16.95845391408925 >1k 0.05981952219372258 12.147190558488896 >5k 0.0032867869337210214 2.3955967272318675 >10k+ 0.0026294295469768167 4.324397100379522 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAAAAAAAAAAAAAAAAAAAAAAAAAA 18749 0.340102921540148 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAA 17787 0.32265244362017237 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAA 17259 0.3130746345331172 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA 15659 0.2840509706329499 No Hit AAAAAAAAAAAAAAAAAAAAAAAAA 14082 0.2554445219013475 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAA 13808 0.25047421945844384 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAG 11581 0.21007690726739847 No Hit AAAAAAAAAAAAAAAAAAAAAAAA 11090 0.20117027040803462 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 9068 0.1644916151541982 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT 7926 0.14377597504545378 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC 7823 0.14190757668188053 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCC 6719 0.12188124859076506 No Hit TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACC 6378 0.1156955802220419 No Hit TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTTTC 6068 0.1100722453413845 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTC 5890 0.1068433627324909 No Hit CCTTTCCGGCGGTGACGACCTACGCACACGAGAACATGCCTCTCGCA 5697 0.1033423832745332 No Hit TCTCCCAGACAGTGGCTCAGCCTTCAGGACTCTCTTCCAGCATGGC 5686 0.10314284558521955 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.08527515249667905 0.0 0.0 0.0 0.0 2 0.14009359768812005 0.0 0.0 0.0 0.0 3 0.1895608048479677 0.0 0.0 0.0 0.0 4 0.2627729970361397 0.0 0.0 0.0 0.0 5 0.3062177939367027 0.0 0.0 0.0 0.0 6 0.40859876834454284 0.0 0.0 0.0 0.0 7 0.45547198554331303 0.0 0.0 0.0 0.0 8 0.5106895061133813 0.0 0.0 0.0 0.0 9 0.5718024584131711 0.0 0.0 0.0 0.0 10 0.6157188898521118 0.0 0.0 0.0 0.0 11 0.6696484853366101 0.0 0.0 0.0 0.0 12 0.7169751972838204 0.0 0.0 0.0 0.0 13 0.7650275008285349 0.0 0.0 0.0 0.0 14 0.8057331894485196 0.0 0.0 0.0 0.0 15 0.8552366761882424 0.0 0.0 0.0 0.0 16 0.9007312693517546 0.0 0.0 0.0 0.0 17 0.9595767479093439 0.0 0.0 0.0 0.0 18 0.9944232843794822 0.0 0.0 0.0 0.0 19 1.0329521982069543 0.0 0.0 0.0 0.0 20 1.076270016577954 0.0 0.0 0.0 0.0 21 1.114291016287173 0.0 0.0 0.0 0.0 22 1.147504971662927 0.0 0.0 0.0 0.0 23 1.1805738087191802 0.0 0.0 0.0 0.0 24 1.2155654635088196 0.0 0.0 0.0 0.0 25 1.2494324513223272 0.0 0.0 0.0 0.0 26 1.2854399343484724 0.0 0.0 0.0 0.0 27 1.3147719746775788 0.0 0.0 0.0 0.0 28 1.3472966180357038 0.0 0.0 0.0 0.0 29 1.3825059503045942 0.0 0.0 0.0 0.0 30 1.4133798727783973 0.0 0.0 0.0 0.0 31 1.4430384293263807 0.0 0.0 0.0 0.0 32 1.4733137387322428 0.0 0.0 0.0 0.0 33 1.5015936712449682 0.0 0.0 0.0 0.0 34 1.5313610665325774 0.0 0.0 0.0 0.0 35 1.5576093425722912 0.0 0.0 0.0 0.0 36 1.581336187810678 0.0 0.0 0.0 0.0 37 1.5964466328287026 0.0 0.0 0.0 0.0 38 1.6101058946517188 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCACTCG 20 1.1711745E-7 259.5476 44 TAATGTC 50 0.0 259.5476 44 CGAATAT 40 0.0 227.10417 44 CATAGTC 170 0.0 190.84384 44 TTCGGCG 115 0.0 180.55487 44 GGCATCG 125 0.0 176.49237 44 CGTACTA 45 1.891749E-10 173.03175 44 GCCAGCG 510 0.0 160.30882 44 ACGAGCC 220 0.0 147.47025 44 AGTCCCG 45 3.8366124E-8 144.19313 44 CTATCAT 2745 0.0 143.2476 44 ATGTTAC 385 0.0 131.45918 44 GCGACCA 130 0.0 129.7738 44 GCATTAG 220 0.0 117.9762 44 ATCACTG 245 0.0 116.53159 44 CGAGTAC 25 1.7541606E-7 111.773315 43 ATATCGC 75 0.0 111.773315 43 GCGTACT 30 3.981768E-9 111.773315 43 ACGAATA 35 9.094947E-11 111.773315 43 CTACGGG 145 0.0 107.39902 44 >>END_MODULE