##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841060.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 724418 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 37.07970536347799 39.0 37.0 39.0 33.0 39.0 2 37.70263991231582 39.0 37.0 39.0 35.0 39.0 3 38.04066436780975 39.0 38.0 39.0 35.0 40.0 4 38.71000030369207 39.0 38.0 41.0 35.0 41.0 5 39.17914657007418 40.0 38.0 41.0 35.0 41.0 6 39.132079821318634 40.0 38.0 41.0 35.0 41.0 7 39.15264943720338 40.0 38.0 41.0 35.0 41.0 8 39.09716627692851 40.0 38.0 41.0 35.0 41.0 9 39.08301560701142 40.0 38.0 41.0 35.0 41.0 10 39.01847690145745 40.0 38.0 41.0 35.0 41.0 11 38.934212015714685 40.0 38.0 41.0 35.0 41.0 12 38.87992015659467 40.0 38.0 41.0 35.0 41.0 13 38.7311993904072 40.0 38.0 41.0 35.0 41.0 14 38.70917481343644 40.0 38.0 41.0 35.0 41.0 15 38.6762794408753 40.0 38.0 41.0 35.0 41.0 16 38.65270465394289 40.0 38.0 41.0 35.0 41.0 17 38.65363091474811 40.0 38.0 41.0 35.0 41.0 18 38.59694540997049 40.0 38.0 41.0 35.0 41.0 19 38.55704441358442 40.0 38.0 41.0 35.0 41.0 20 38.36375545610407 40.0 37.0 41.0 34.0 41.0 21 38.30751858733494 40.0 37.0 41.0 34.0 41.0 22 38.26157411880986 40.0 37.0 41.0 34.0 41.0 23 38.16544177532861 40.0 37.0 41.0 34.0 41.0 24 37.89777725015116 39.0 36.0 41.0 33.0 41.0 25 37.83829692747509 39.0 36.0 41.0 33.0 41.0 26 37.69326047969428 39.0 36.0 41.0 33.0 41.0 27 37.608467885405375 39.0 36.0 41.0 33.0 41.0 28 37.40278106550812 39.0 35.0 41.0 33.0 41.0 29 37.380699069688355 39.0 35.0 41.0 33.0 41.0 30 37.285837428676274 38.0 35.0 40.0 33.0 41.0 31 37.24837012939066 38.0 35.0 40.0 33.0 41.0 32 37.15834412779083 38.0 35.0 40.0 32.0 41.0 33 36.96094476774044 38.0 35.0 40.0 32.0 41.0 34 36.89070678697251 38.0 35.0 40.0 32.0 41.0 35 36.70557863351751 38.0 35.0 40.0 32.0 41.0 36 36.59088900236203 37.0 35.0 40.0 31.0 41.0 37 36.51168027188419 37.0 35.0 40.0 31.0 41.0 38 36.226929721981215 37.0 34.0 40.0 31.0 41.0 39 36.17181276714591 37.0 34.0 40.0 31.0 41.0 40 35.98877472143038 36.0 34.0 40.0 31.0 41.0 41 35.86913450949891 36.0 34.0 40.0 31.0 41.0 42 35.78233614513825 36.0 34.0 40.0 30.0 41.0 43 35.55010036604085 36.0 34.0 39.0 30.0 41.0 44 35.18723332259104 35.0 33.0 39.0 29.0 41.0 45 34.892981522187114 35.0 33.0 39.0 29.0 40.0 46 34.60644018002617 35.0 32.0 39.0 28.0 40.0 47 34.84699823574663 35.0 33.0 39.0 29.0 40.0 48 35.57106999551572 36.0 34.0 39.0 31.0 40.0 49 36.085957534106065 37.0 35.0 39.0 32.0 40.0 50 36.364709848206935 37.0 35.0 39.0 32.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 5.0 21 7.0 22 26.0 23 52.0 24 87.0 25 158.0 26 323.0 27 590.0 28 1324.0 29 2664.0 30 5317.0 31 10071.0 32 18355.0 33 31436.0 34 48732.0 35 52838.0 36 84459.0 37 122229.0 38 118747.0 39 107467.0 40 119530.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 37.36972300522626 19.00781040780323 43.6224665869705 2 18.966121769475635 19.531817265722275 38.42878006896571 23.073280895836383 3 23.85266517397414 23.253287466628382 26.833954981792278 26.060092377605194 4 21.365565184741406 26.244378245708972 30.193203371534118 22.19685319801551 5 15.525428688961346 27.193968123376283 29.669472597312602 27.61113059034977 6 17.461465617916726 27.193553997829984 27.259676043389312 28.085304340863974 7 22.53988719220119 20.402999373290008 22.053841842693032 35.003271591815775 8 21.89178071224072 26.644837648981667 29.20537590175838 22.258005737019236 9 22.597864768683273 29.257969846138554 27.559364897062196 20.584800488115977 10 31.164189735760296 19.8163215160308 25.215138221303167 23.804350526905736 11 23.043601898351504 20.111040863148073 24.423330176776393 32.42202706172404 12 20.01703436413783 26.619575990657328 25.64016907365637 27.723220571548467 13 26.199238561162204 22.729694734255638 23.824918762372 27.246147942210158 14 17.817751629584023 24.84891319652466 21.62618819521326 35.707146978678054 15 23.67362489612351 32.38158080003534 23.148789787111863 20.79600451672929 16 18.644622303697588 34.10406698894837 20.720771709151347 26.530538998202697 17 18.26597351253006 39.67460775408673 18.412435914071708 23.646982819311503 18 18.88246840912291 27.871891642670395 22.30949534660928 30.93614460159742 19 23.99001681349718 24.297021885154706 20.984293598447305 30.728667702900815 20 21.06132095005922 23.12187162660232 27.8089445596327 28.007862863705764 21 22.15654497817558 35.43230565778322 21.081889185525483 21.329260178515717 22 27.607403460433066 24.70189862758794 21.21620390437565 26.474494007603344 23 29.274810951688114 22.550240330858703 26.48705581584113 21.687892901612052 24 22.245858054327748 26.19316471981646 26.12635246501329 25.434624760842496 25 23.036442865469482 24.130006383746426 20.719420466846152 32.11413028393794 26 23.235087072389923 31.589371413885768 24.091005592522446 21.084535921201862 27 23.582298614890664 27.920170224016715 22.342183463349944 26.155347697742677 28 23.10807458698626 22.685244902443 21.35807281515553 32.84860769541521 29 20.47342875064476 31.156652706991128 26.647977561643327 21.721940980720788 30 23.552335244893115 30.31292497427669 25.284539390843218 20.850200389986977 31 25.20070247676629 29.522556135161626 23.3360696917181 21.940671696353984 32 20.360653874566705 30.114569384927197 23.72808749411708 25.796689246389015 33 21.24538899698029 22.68041237113402 30.090444622477335 25.983754009408354 34 24.499873124155393 30.764294186725838 23.778893760659045 20.956938928459728 35 19.12176110821709 23.180662597227975 23.51310397846255 34.18447231609239 36 19.3241778422783 22.477238183115794 31.057151644912672 27.14143232969323 37 19.785158654149264 35.854426674432496 21.66547076854718 22.694943902871056 38 27.751329737070428 22.769323625938362 22.414274397374477 27.065072239616732 39 19.277309597823976 32.84695575092287 26.70882310083544 21.16691155041772 40 19.075335245969256 24.84685163628142 28.53845284252529 27.539360275224034 41 18.36666486981834 33.05127948435587 22.285437057686533 26.29661858813926 42 19.466891735407447 32.791489665956334 20.799584679782203 26.942033918854015 43 19.227771873893023 23.21580666745385 23.41260282599284 34.14381863266029 44 19.823396712858525 25.93103448275862 20.06542056074766 34.180148243635195 45 19.803029262261298 24.849567248248388 35.03795164170903 20.309451847781286 46 19.542736655980626 29.60436882284713 29.244277362354502 21.60861715881774 47 19.572157041582024 30.680273989009116 28.54773848513743 21.199830484271427 48 25.474780299456647 25.72374512989849 19.67928670848111 29.122187862163752 49 15.428932882004991 30.6091223031422 22.742503504632953 31.219441310219853 50 15.883245258325815 30.379433081171115 34.09543827643986 19.641883384063217 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 14633.0 1 13482.0 2 9818.5 3 6968.0 4 5989.5 5 4049.0 6 2027.0 7 1327.0 8 1252.0 9 1183.5 10 1199.0 11 1244.0 12 1295.0 13 1193.0 14 1133.0 15 1218.5 16 1367.5 17 1351.5 18 1108.5 19 1056.5 20 1198.0 21 1356.0 22 1544.5 23 1774.5 24 2055.0 25 2541.5 26 3317.5 27 4210.5 28 5258.5 29 6439.5 30 7810.5 31 11721.0 32 18211.5 33 20878.0 34 20903.0 35 22327.0 36 22528.0 37 21565.5 38 21656.0 39 24098.0 40 26552.5 41 30035.0 42 36182.0 43 40316.5 44 41376.0 45 41583.0 46 43727.5 47 46742.5 48 54450.5 49 71283.5 50 92869.0 51 104873.0 52 96156.0 53 76903.5 54 62792.5 55 57738.5 56 54414.0 57 50278.0 58 47681.5 59 43948.5 60 38185.5 61 32770.5 62 27600.0 63 21337.5 64 15902.5 65 13000.0 66 9221.5 67 5849.5 68 4259.5 69 2941.0 70 2075.5 71 1521.5 72 1110.0 73 699.0 74 433.0 75 265.5 76 165.5 77 103.0 78 45.5 79 25.0 80 18.5 81 14.5 82 11.5 83 9.5 84 7.5 85 5.5 86 2.5 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 3838.0 25 4624.0 26 4893.0 27 5578.0 28 5612.0 29 4978.0 30 4196.0 31 4390.0 32 4787.0 33 3694.0 34 4025.0 35 4041.0 36 3596.0 37 3441.0 38 3909.0 39 4222.0 40 5309.0 41 5926.0 42 8184.0 43 14575.0 44 38280.0 45 71061.0 46 77081.0 47 90756.0 48 109446.0 49 133115.0 50 100861.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.372163585112464 #Duplication Level Percentage of deduplicated Percentage of total 1 66.18436066130951 7.5265937621649375 2 12.036609939064359 2.737645944744609 3 4.777742710786336 1.6299981502392265 4 2.3403170595518437 1.0645787376901181 5 1.648418343812969 0.937304153127062 6 1.1264596635187298 0.7686170139339442 7 0.8703357529557427 0.6928320389609314 8 0.7186035784516035 0.6537661957599066 9 0.5826515500958948 0.5963407866728877 >10 5.584957879148358 14.803055694364303 >50 2.3148260542351484 18.732140835815787 >100 1.7236775023670219 32.58519252696648 >500 0.06190672719768881 4.7781805532165125 >1k 0.021849433128596052 3.578596887432394 >5k 0.003641572188099342 2.8345513225789527 >10k+ 0.003641572188099342 6.080605396331952 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 17646 2.435886463340226 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 15069 2.0801526190679964 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA 11334 1.5645663139237294 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC 8495 1.1726655052745791 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT 6605 0.9117664111051906 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA 5434 0.7501194061991834 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCTA 3119 0.4305525263038743 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTC 2041 0.2817434133331861 No Hit TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTTTCCG 1883 0.2599328012280203 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACC 1684 0.23246247332341274 No Hit CTCTTCCTGCTCTCCATCATGGCGCAGGATCAAGGTGAAAAGGAGAACC 1547 0.21355074004235125 No Hit CCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCTAG 1525 0.21051381936948005 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCT 1409 0.1945009649125229 No Hit CAGAGTGTTGCTTAACACAAAGCACCCAACTTACACTTAGGAGATTTCAA 1348 0.18608041213774368 No Hit TCCCTGGTGTGATTCCGTCCTGCGCGGTTGTTCTCTGGAGCAGCGTTCT 1256 0.17338056205119143 No Hit CCTTTCCGGCGGTGACGACCTACGCACACGAGAACATGCCTCTCGCAAA 1207 0.1666165114616147 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAA 1197 0.16523609297394598 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACT 1165 0.16081875381340607 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAA 1159 0.15999050272080484 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAA 1108 0.15295036843369436 No Hit TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTTTC 1095 0.15115582439972503 No Hit CTCTCGGCCTTAGCGCCATTTTTTTGGAAACCTCTGCGCCATGAGAGCC 1064 0.14687652708795199 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA 1063 0.14673848523918512 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAA 1054 0.14549610860028325 No Hit ACATACCCATGGCCAACCTCCTACTCCTCATTGTACCCATTCTAATCGCA 994 0.13721359767427094 No Hit CCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCT 962 0.132796258513731 No Hit AATGCCCCAACTAAATACTACCGTATGGCCCACCATAATTACCCCCATAC 929 0.12824087750442423 No Hit CTTTCCGGCGGTGACGACCTACGCACACGAGAACATGCCTCTCGCAAAG 926 0.12782675195812362 No Hit CTCTTCCTGCTCTCCATCATGGCGCAGGATCAAGGTGAAAAGGAGAA 898 0.1239615801926512 No Hit AAAAAAAAAAAAAAAAAAAAAAAAA 893 0.12327137094881684 No Hit CCTCTTTTCCGTGGCGCCTCGGAGGCGTTCAGCTGCTTCAAGATGAAGC 892 0.12313332910004998 No Hit CTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTT 868 0.11982032472964503 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAA 838 0.11567906926663886 No Hit CTTTCCGCGCCGATAGCGCTCACGCAAGCATGGTTAACGTCCCTAAAAC 810 0.11181389750116646 No Hit CCTTTCCGGCGGTGACGACCTACGCACACGAGAACATGCCTCTCGCA 801 0.1105715208622646 No Hit TCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGA 786 0.10850089313076151 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 764 0.10546397245789034 No Hit CAGAGTGTTGCTTAACACAAAGCACCCAACTTACACTTAGGAGATTTC 762 0.10518788876035659 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTT 742 0.10242705178501914 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACA 738 0.10187488438995165 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.043759266059098474 0.0 0.0 0.0 0.0 2 0.08600007178176136 0.0 0.0 0.0 0.0 3 0.11995836657841191 0.0 0.0 0.0 0.0 4 0.14452981565891515 0.0 0.0 0.0 0.0 5 0.1656502185202466 0.0 0.0 0.0 0.0 6 0.1968476763415597 0.0 0.0 0.0 0.0 7 0.21907241399302613 0.0 0.0 0.0 0.0 8 0.2604849686230878 0.0 0.0 0.0 0.0 9 0.29030200795673217 0.0 0.0 0.0 0.0 10 0.31514954073476914 0.0 0.0 0.0 0.0 11 0.3416535756980086 0.0 0.0 0.0 0.0 12 0.3778205400749291 0.0 0.0 0.0 0.0 13 0.40846583050117474 0.0 0.0 0.0 0.0 14 0.43013840075757365 0.0 0.0 0.0 0.0 15 0.4549859335356107 0.0 0.0 0.0 0.0 16 0.481628010347617 0.0 0.0 0.0 0.0 17 0.5182091002708381 0.0 0.0 0.0 0.0 18 0.5730117142312864 0.0 0.0 0.0 0.0 19 0.5942701589413847 0.0 0.0 0.0 0.0 20 0.6184274824755873 0.0 0.0 0.0 0.0 21 0.6424467641610231 0.0 0.0 0.0 0.0 22 0.6623247903834526 0.0 0.0 0.0 0.0 23 0.682478900303416 0.0 0.0 0.0 0.0 24 0.702909093920913 0.0 0.0 0.0 0.0 25 0.724581664177312 0.0 0.0 0.0 0.0 26 0.7487389877115146 0.0 0.0 0.0 0.0 27 0.775381064523521 0.0 0.0 0.0 0.0 28 0.8057502712522329 0.0 0.0 0.0 0.0 29 0.8358433942834109 0.0 0.0 0.0 0.0 30 0.8593105085737792 0.0 0.0 0.0 0.0 31 0.8836058739567487 0.0 0.0 0.0 0.0 32 0.9069349463983502 0.0 0.0 0.0 0.0 33 0.9302640188399515 0.0 0.0 0.0 0.0 34 0.9573202211982584 0.0 0.0 0.0 0.0 35 0.9763699963280869 0.0 0.0 0.0 0.0 36 1.0002512361647558 0.0 0.0 0.0 0.0 37 1.0217857645723878 0.0 0.0 0.0 0.0 38 1.0329671543225043 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATATACT 25 6.712071E-10 283.3517 44 CGGGCAA 20 7.527888E-8 283.3517 44 GTATAGT 10 9.537703E-4 283.3517 44 CATTATG 40 0.0 247.93274 44 CTATCAT 2035 0.0 228.35223 44 AATCGCA 160 0.0 203.65904 44 CATGATA 35 5.0276867E-9 202.39409 44 CAAACAC 15 0.003210482 188.90115 44 CAATAGG 15 0.003210482 188.90115 44 GATAAAT 25 6.5070475E-5 170.01103 44 ATGATTC 60 3.6379788E-12 165.28851 44 TATATGC 35 1.2247365E-6 161.91527 44 TAGAGTC 20 0.007589957 141.67586 44 CATTACA 30 1.345507E-4 141.67586 44 CCATCTA 70 1.2732926E-11 141.67586 44 GTACTTC 20 0.007589957 141.67586 44 ATTGGAC 20 0.007589957 141.67586 44 ACTTCTA 810 0.0 136.4286 44 GCAGCGA 45 4.277779E-6 125.9341 44 TTTTGAC 45 4.277779E-6 125.9341 44 >>END_MODULE