##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841059.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 649158 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.09673762011714 39.0 35.0 39.0 31.0 39.0 2 37.06691283169891 39.0 37.0 39.0 33.0 39.0 3 37.34286106001929 39.0 37.0 39.0 34.0 39.0 4 37.84524260657652 39.0 37.0 39.0 35.0 41.0 5 38.59264616626461 40.0 37.0 41.0 35.0 41.0 6 38.52611536790735 40.0 37.0 41.0 35.0 41.0 7 38.577526580585925 40.0 37.0 41.0 35.0 41.0 8 38.55119708915241 40.0 37.0 41.0 35.0 41.0 9 38.55892094066468 40.0 37.0 41.0 35.0 41.0 10 38.497091617140974 40.0 37.0 41.0 35.0 41.0 11 38.456488250934285 40.0 37.0 41.0 35.0 41.0 12 38.419708299058165 40.0 37.0 41.0 34.0 41.0 13 38.19625730561743 40.0 36.0 41.0 34.0 41.0 14 37.941125273046005 39.0 36.0 40.0 34.0 41.0 15 37.486383900375564 38.0 35.0 40.0 34.0 41.0 16 37.23758622708185 38.0 35.0 40.0 33.0 41.0 17 37.16872163633507 38.0 35.0 40.0 33.0 41.0 18 37.101315858388865 38.0 35.0 40.0 33.0 41.0 19 37.13627036869298 38.0 35.0 40.0 33.0 41.0 20 37.00930744133169 38.0 35.0 40.0 33.0 41.0 21 36.9038323489813 38.0 35.0 40.0 33.0 41.0 22 36.79376207333192 38.0 35.0 40.0 33.0 41.0 23 36.74102606761374 38.0 35.0 40.0 33.0 41.0 24 36.35389689413055 37.0 35.0 40.0 32.0 41.0 25 36.2501777435165 37.0 35.0 40.0 31.0 41.0 26 36.08640501344977 37.0 35.0 40.0 31.0 41.0 27 36.015234213828 37.0 35.0 40.0 31.0 41.0 28 35.898786093851044 37.0 34.0 40.0 30.0 41.0 29 35.94357459433855 37.0 34.0 40.0 30.0 41.0 30 36.07670919577156 37.0 35.0 40.0 31.0 41.0 31 36.22284294611213 37.0 35.0 40.0 31.0 41.0 32 36.29576739867593 37.0 35.0 40.0 31.0 41.0 33 36.242770549240866 37.0 35.0 40.0 31.0 41.0 34 36.183235538558634 37.0 34.0 40.0 31.0 41.0 35 36.013742549347384 36.0 34.0 40.0 31.0 41.0 36 35.931548248339965 36.0 34.0 40.0 31.0 41.0 37 35.94413660766262 36.0 34.0 40.0 31.0 41.0 38 35.741060518606446 36.0 34.0 40.0 31.0 41.0 39 35.67352752119894 36.0 34.0 39.0 30.0 41.0 40 35.48801580372733 35.0 34.0 39.0 30.0 41.0 41 35.324695703612726 35.0 34.0 39.0 30.0 41.0 42 35.153687393341045 35.0 33.0 39.0 29.0 41.0 43 35.015622815601844 35.0 33.0 39.0 29.0 41.0 44 34.687570374301636 35.0 33.0 38.0 29.0 40.0 45 34.4564049889208 35.0 33.0 38.0 28.0 40.0 46 34.20189637172318 35.0 32.0 38.0 27.0 40.0 47 34.074473625980836 35.0 32.0 37.0 28.0 40.0 48 34.942272244179485 35.0 33.0 38.0 30.0 40.0 49 35.463381810025524 35.0 34.0 39.0 31.0 40.0 50 35.43169965374257 36.0 34.0 39.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 8.0 21 31.0 22 62.0 23 135.0 24 273.0 25 485.0 26 865.0 27 1478.0 28 2756.0 29 4760.0 30 8631.0 31 14712.0 32 25979.0 33 44496.0 34 63753.0 35 53157.0 36 101473.0 37 124318.0 38 78916.0 39 69363.0 40 53505.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 52.62386044691739 18.511826088563954 28.864313464518652 2 18.59331626506952 39.69295610621759 25.789869338435327 15.92385829027756 3 17.227238977259773 39.80402305756072 21.350272198755928 21.618465766423583 4 15.771353045021396 42.292631377877186 26.652679316899736 15.283336260201677 5 14.871572098010038 41.96944349449595 24.84279636082433 18.316188046669684 6 15.886425184623773 43.02604296642728 20.97332236527933 20.114209483669615 7 20.359758333102267 40.60321216098392 18.118085273538952 20.918944232374862 8 20.79231866510156 39.387637524300715 23.310349714553315 16.509694096044413 9 19.001383330406465 44.83392332837306 19.959547598581548 16.205145742638926 10 21.856466376444565 39.84207234602361 19.017558129145755 19.283903148386063 11 19.209807165589886 38.889761814535134 21.11473631997141 20.785694699903566 12 19.4256251944827 42.62829696314302 18.370104042467318 19.575973799906958 13 18.07418224838945 39.248534255142815 18.625511816845822 24.05177167962191 14 18.255031902864943 39.82558945587977 20.307844931434257 21.61153370982103 15 18.067558283191456 44.28906367941241 20.66723355485105 16.97614448254508 16 16.794370553855916 47.23503368979509 17.79520548156227 18.175390274786725 17 20.103888421616926 45.690725524448595 16.306661860440755 17.898724193493727 18 18.99753218784949 42.44005311495815 17.370655526081478 21.191759171110885 19 19.559644955465387 41.10940633867256 17.626371391864538 21.704577313997518 20 19.54809152779447 40.66051716223169 19.16374750060848 20.627643809365363 21 20.046737466071434 46.251914017850815 17.452145702587043 16.249202813490708 22 20.22373597798995 43.59739847617991 16.031998373277386 20.146867172552753 23 20.15811250881912 41.38530219145416 20.331567969585215 18.125017330141507 24 20.107277427067064 42.07172984080917 19.207496480055703 18.613496252068064 25 19.91909714175814 41.21253395255864 18.66267512268638 20.205693782996843 26 19.58695567424272 45.75243980091744 17.860089925019167 16.80051459982067 27 21.760371845502235 40.344058134541385 18.44087605991967 19.45469396003671 28 21.899337869373294 36.7849762420221 18.68990215649338 22.625783732111227 29 22.049843390261188 36.46454891621654 23.197152016097938 18.288455677424327 30 22.021050377101595 35.08937996236633 24.322288004650662 18.567281655881406 31 21.525152144227203 35.13604180315576 21.995398179794616 21.34340787282242 32 21.853907637655418 32.040408525754884 23.186864201517842 22.918819635071856 33 21.014138140904382 31.28073955883079 27.725025907588048 19.98009639267679 34 21.594419344827084 34.533532463907584 23.495741396871818 20.376306794393518 35 20.78668760447799 30.280676426388396 23.569812403964676 25.36282356516894 36 21.376809272702808 29.837488493484805 24.665269866492388 24.120432367320003 37 20.773808240443284 36.68463379401048 20.88958840904681 21.651969556499427 38 23.71453775197935 30.35470415908868 22.236258889385013 23.694499199546954 39 18.023941814083315 37.35085896431182 24.010496006762526 20.61470321484234 40 20.10543241991234 31.93150233403414 23.21896269108791 24.744102554965615 41 19.46706644961583 36.86981691416031 22.34735508808847 21.315761548135388 42 19.304784047829024 34.56906918944921 23.03054597931532 23.095600783406447 43 23.99482734516986 28.677477981266602 20.55990493499231 26.767789738571228 44 21.33091401126945 30.67040561894721 20.886016940035717 27.11266342974762 45 20.66990041338791 30.566225349411212 28.02734720041995 20.736527036780924 46 20.95390643994108 31.62621741058021 25.527508831142832 21.892367318335886 47 18.675426801245937 34.59175162975949 24.511582781569675 22.221238787424895 48 23.979956159287923 29.566740841608823 22.24417948121824 24.20912351788502 49 19.536975854606293 32.081911262798634 20.956722579550068 27.424390303044998 50 20.936818706450648 30.798743213781897 26.980293250117555 21.284144829649897 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 121334.0 1 117874.0 2 71451.0 3 28098.5 4 26843.0 5 19432.0 6 8232.0 7 3623.5 8 3305.0 9 2706.0 10 2315.0 11 2046.0 12 1786.5 13 1604.0 14 1668.0 15 1812.0 16 1919.0 17 2126.0 18 2423.5 19 2727.5 20 2970.0 21 3369.5 22 4000.0 23 4902.0 24 6123.5 25 7532.0 26 8573.5 27 8566.0 28 8287.5 29 8762.0 30 9651.5 31 10772.5 32 12264.5 33 13612.5 34 16476.5 35 20396.5 36 22217.5 37 21989.5 38 21810.5 39 22446.0 40 23446.5 41 23728.5 42 23219.0 43 23303.5 44 24877.0 45 27498.0 46 29999.0 47 30727.5 48 32920.0 49 38858.5 50 46737.5 51 53742.5 52 53809.0 53 49064.0 54 45057.5 55 41211.0 56 38001.5 57 36732.0 58 35584.5 59 31594.5 60 26890.0 61 23603.5 62 19314.0 63 14266.0 64 10991.5 65 9422.5 66 7512.5 67 5864.5 68 4622.0 69 3382.5 70 2490.0 71 1630.0 72 921.0 73 557.0 74 378.0 75 334.5 76 313.0 77 271.5 78 198.5 79 98.5 80 40.5 81 33.0 82 30.0 83 20.5 84 8.5 85 8.0 86 5.0 87 2.5 88 3.0 89 3.0 90 2.0 91 1.0 92 1.0 93 1.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 14817.0 25 18717.0 26 21829.0 27 24723.0 28 24406.0 29 21730.0 30 16180.0 31 11316.0 32 9096.0 33 6257.0 34 6303.0 35 5571.0 36 4403.0 37 4695.0 38 4847.0 39 5260.0 40 6101.0 41 6352.0 42 7375.0 43 10881.0 44 22061.0 45 46623.0 46 55860.0 47 52883.0 48 75913.0 49 71387.0 50 93572.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.828001811577458 #Duplication Level Percentage of deduplicated Percentage of total 1 68.45353891971084 8.781221212709386 2 11.426135408410788 2.9314897143684586 3 4.563249033311718 1.756121005980054 4 2.440137377813003 1.2520834681233228 5 1.5539063813435166 0.9966756937448202 6 1.0723635228282538 0.8253768728106254 7 0.820183970987343 0.7364925025956701 8 0.7012993251194851 0.7197015210472643 9 0.5235727838220813 0.604475335742608 >10 5.345005644018541 15.676306846715281 >50 1.8937483488243632 17.218150280825313 >100 1.1276028532315008 23.75769843397139 >500 0.042029925306818455 3.6952483062675032 >1k 0.02761966520162356 7.161430653246205 >5k 0.0036025650262987248 3.6171471352120745 >10k+ 0.006004275043831208 10.270381016640016 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAAAAAAAAAAAAAAAAAAAAAAAAAA 15058 2.319620184916461 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAA 14515 2.23597336857899 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAA 13961 2.1506320495164504 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAA 11730 1.8069560877321083 No Hit AAAAAAAAAAAAAAAAAAAAAAAAA 11407 1.757199325896007 No Hit AAAAAAAAAAAAAAAAAAAAAAAA 9020 1.389492234556148 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 7306 1.125457900850024 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 7155 1.1021969998059025 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA 4662 0.7181610640244748 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4163 0.6412922585872777 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 3074 0.47353648880549876 No Hit TAAAAAAAAAAAAAAAAAAAAAAAAAAA 3059 0.4712258032713145 No Hit TAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3029 0.466604432202946 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT 2740 0.4220852242443288 No Hit TAAAAAAAAAAAAAAAAAAAAAAAAAA 2621 0.4037537856731335 No Hit TAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2424 0.37340678232417995 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2197 0.3384384079068578 No Hit TAAAAAAAAAAAAAAAAAAAAAAAAA 2120 0.3265768888313785 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC 1797 0.2768201269952769 No Hit TAAAAAAAAAAAAAAAAAAAAAAAA 1597 0.24601098653948655 No Hit TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1578 0.24308411819618644 No Hit CAAAAAAAAAAAAAAAAAAAAAAAAAAA 1268 0.19532995048971127 No Hit CAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1193 0.18377652281878987 No Hit CAAAAAAAAAAAAAAAAAAAAAAAAAA 1186 0.18269820290283723 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAG 1142 0.1759201920025633 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA 1142 0.1759201920025633 No Hit TAAAAAAAAAAAAAAAAAAAAAAA 1130 0.1740716435752159 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1109 0.1708366838273579 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA 1107 0.1705285924228 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAG 1080 0.1663693584612683 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAG 1071 0.16498294714075773 No Hit CAAAAAAAAAAAAAAAAAAAAAAAAA 985 0.15173501674476783 No Hit CAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 971 0.1495783769128625 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAG 963 0.14834601129463088 No Hit CTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTT 932 0.14357059452398338 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTG 902 0.1389492234556148 Illumina Single End Adapter 1 (100% over 32bp) TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 901 0.13879517775333586 No Hit AAAAAAAAAAAAAAAAAAAAAAAAG 848 0.13063075553255138 No Hit ACAAGTAGCATCCGTACTATACTTCACAACAATCCTAATCCTAATACCA 838 0.12909029850976186 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAG 822 0.12662556727329866 No Hit CTCTCGGCCTTAGCGCCATTTTTTTGGAAACCTCTGCGCCATGAGAGCC 820 0.12631747586874073 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACC 802 0.1235446532277196 No Hit CAAAAAAAAAAAAAAAAAAAAAAAA 776 0.11953946496846685 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACA 713 0.10983458572489287 No Hit CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 688 0.10598344316791906 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 651 0.10028375218359782 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.39035180957486465 0.0 0.0 0.0 0.0 2 0.7295604459931172 0.0 0.0 0.0 0.0 3 0.9723364727847458 0.0 0.0 0.0 0.0 4 1.1222229411021662 0.0 0.0 0.0 0.0 5 1.2553184278711809 0.0 0.0 0.0 0.0 6 1.4323169397896969 0.0 0.0 0.0 0.0 7 1.5671069292837798 0.0 0.0 0.0 0.0 8 1.6917299024274521 0.0 0.0 0.0 0.0 9 1.8151205099528929 0.0 0.0 0.0 0.0 10 1.9608477443087815 0.0 0.0 0.0 0.0 11 2.1119665782444335 0.0 0.0 0.0 0.0 12 2.25661549268437 0.0 0.0 0.0 0.0 13 2.404037229765327 0.0 0.0 0.0 0.0 14 2.520341734985936 0.0 0.0 0.0 0.0 15 2.608918013796333 0.0 0.0 0.0 0.0 16 2.6820897223788354 0.0 0.0 0.0 0.0 17 2.7484834200610635 0.0 0.0 0.0 0.0 18 2.795775450660702 0.0 0.0 0.0 0.0 19 2.8364435160623453 0.0 0.0 0.0 0.0 20 2.8744928045252465 0.0 0.0 0.0 0.0 21 2.9159310984382847 0.0 0.0 0.0 0.0 22 2.9512075642601645 0.0 0.0 0.0 0.0 23 2.9847895273569764 0.0 0.0 0.0 0.0 24 3.020836221690251 0.0 0.0 0.0 0.0 25 3.052261544955157 0.0 0.0 0.0 0.0 26 3.094161975975032 0.0 0.0 0.0 0.0 27 3.1285141675832384 0.0 0.0 0.0 0.0 28 3.1607097193595397 0.0 0.0 0.0 0.0 29 3.1933674082426773 0.0 0.0 0.0 0.0 30 3.2315707424078575 0.0 0.0 0.0 0.0 31 3.2649986598023903 0.0 0.0 0.0 0.0 32 3.2998129885174334 0.0 0.0 0.0 0.0 33 3.3323166316982924 0.0 0.0 0.0 0.0 34 3.361739360833572 0.0 0.0 0.0 0.0 35 3.3860785817936465 0.0 0.0 0.0 0.0 36 3.406874751601305 0.0 0.0 0.0 0.0 37 3.4248980987679425 0.0 0.0 0.0 0.0 38 3.4338327495001217 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATATG 30 1.6370905E-11 244.40443 44 GTTCTAA 15 1.5297821E-5 244.40443 44 AGTCACT 15 1.5297821E-5 244.40443 44 CGTGCGC 15 1.5297821E-5 244.40443 44 ACACCTG 30 1.6370905E-11 244.40443 44 ATCAGAT 30 1.6370905E-11 244.40443 44 TCCTAAC 15 1.5297821E-5 244.40443 44 TAGCAAG 15 1.5297821E-5 244.40443 44 GGTAGCC 15 1.5297821E-5 244.40443 44 TCACGAC 10 0.0014848562 244.40442 44 CACGGCT 20 1.573244E-7 244.40442 44 GAGTCAT 25 1.6261765E-9 244.40442 44 TAAACGC 20 1.573244E-7 244.40442 44 ATAGAAC 20 1.573244E-7 244.40442 44 CTTACGA 40 0.0 244.40442 44 CGTATCG 25 4.784888E-7 195.52353 44 CTATCAT 430 0.0 190.40808 44 CATAAGC 45 1.8189894E-12 190.09233 44 CATTATG 20 4.8191076E-5 183.30331 44 AAACGGC 35 1.2159944E-8 174.57458 44 >>END_MODULE