ERR841052.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR841052.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	76128603
Sequences flagged as poor quality	0
Sequence length	24-50
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGCAAGTTTGAATTTCGTGGAGGCTCGGG	341466	0.44853837656787154	No Hit
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC	192654	0.2530638845428439	No Hit
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA	119644	0.15716037768353638	No Hit
CAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCGCTCT	106815	0.14030863012158518	No Hit
ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT	101188	0.13291719013942763	No Hit
ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAA	98204	0.12899750702111268	No Hit
CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA	84295	0.11072710739221103	No Hit
TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	81490	0.10704255271832584	No Hit
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT	77476	0.10176989586949337	No Hit
CGGCAAGTTTGAATTTCGTGGAGGCTCGGGTTGTGAGGG	76647	0.10068094905143603	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTGCGC	8580	83.86189	44
TCGTGCG	14855	78.16883	43
CTATCAT	28045	72.00138	44
CTATACG	11515	67.70781	44
CCCTATC	23365	53.8833	42
CCTTAGC	46715	51.18056	43
AACGACA	9930	49.252087	43
CTCGTGC	19820	49.017147	42
ACCTTAG	36155	46.537785	42
CCTATCA	26545	45.690586	43
AACCTTA	51050	43.81683	41
TATGTTC	27950	43.3938	43
ACGACAC	5390	42.8457	44
TCGCAAA	6105	42.492477	43
GAACACA	41960	40.82344	44
CCCCTAT	27510	40.26015	41
ATGTTCT	26790	39.325745	44
ACTCGTG	28080	38.79406	41
TGCGGTC	7045	37.727406	42
GACAACC	59490	37.29387	38