##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841048.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3396314 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 37.015740594067566 39.0 37.0 39.0 33.0 39.0 2 37.684363695465144 39.0 37.0 39.0 35.0 39.0 3 37.76485095312153 39.0 37.0 39.0 35.0 39.0 4 38.20742634514948 39.0 38.0 39.0 35.0 41.0 5 39.06624181391944 40.0 38.0 41.0 35.0 41.0 6 38.96430041509707 40.0 38.0 41.0 35.0 41.0 7 39.07121897445289 40.0 38.0 41.0 35.0 41.0 8 38.97145699720344 40.0 38.0 41.0 35.0 41.0 9 39.06309575616389 40.0 38.0 41.0 35.0 41.0 10 39.04540893450959 40.0 38.0 41.0 35.0 41.0 11 39.008152073100426 40.0 38.0 41.0 35.0 41.0 12 38.96731721507493 40.0 38.0 41.0 35.0 41.0 13 38.824291570214065 40.0 38.0 41.0 35.0 41.0 14 38.775961233266415 40.0 38.0 41.0 35.0 41.0 15 38.60378810675338 40.0 38.0 41.0 35.0 41.0 16 38.44003587418596 40.0 37.0 41.0 35.0 41.0 17 38.29089830916694 40.0 37.0 41.0 35.0 41.0 18 38.29972405378301 40.0 37.0 41.0 35.0 41.0 19 38.28323617898698 40.0 37.0 41.0 35.0 41.0 20 38.2511169461952 40.0 36.0 41.0 35.0 41.0 21 38.106453643567704 40.0 36.0 41.0 34.0 41.0 22 38.04878406413541 40.0 36.0 41.0 34.0 41.0 23 37.960292540677926 40.0 36.0 41.0 34.0 41.0 24 37.757091658780666 39.0 35.0 41.0 33.0 41.0 25 37.68773174193694 39.0 35.0 41.0 33.0 41.0 26 37.5889931634687 39.0 35.0 41.0 33.0 41.0 27 37.498561680667 39.0 35.0 41.0 33.0 41.0 28 37.40785836007608 39.0 35.0 41.0 33.0 41.0 29 37.40605738063685 39.0 35.0 41.0 33.0 41.0 30 37.41842944413027 39.0 35.0 40.0 33.0 41.0 31 37.3903639084427 39.0 35.0 40.0 33.0 41.0 32 37.33395668484516 38.0 35.0 40.0 33.0 41.0 33 37.24431712909644 38.0 35.0 40.0 33.0 41.0 34 37.14030091454287 38.0 35.0 40.0 33.0 41.0 35 37.0097420755637 38.0 35.0 40.0 32.0 41.0 36 36.91694840915747 38.0 35.0 40.0 32.0 41.0 37 36.837357527533975 38.0 35.0 40.0 32.0 41.0 38 36.715161070099704 38.0 35.0 40.0 32.0 41.0 39 36.578306421714295 38.0 35.0 40.0 31.0 41.0 40 36.44168131924561 37.0 34.0 40.0 31.0 41.0 41 36.316293949173875 37.0 34.0 40.0 31.0 41.0 42 36.15452862961752 37.0 34.0 40.0 31.0 41.0 43 35.996666311484745 37.0 34.0 40.0 30.0 41.0 44 35.82759858257257 36.0 34.0 40.0 30.0 41.0 45 35.5510230002029 36.0 33.0 40.0 29.0 41.0 46 35.227746542096554 36.0 33.0 40.0 28.0 41.0 47 35.094313544166624 36.0 33.0 39.0 28.0 41.0 48 35.9068499288064 37.0 34.0 40.0 30.0 41.0 49 36.73103641529599 38.0 35.0 40.0 32.0 41.0 50 36.431153051035764 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 6.0 20 28.0 21 71.0 22 150.0 23 300.0 24 599.0 25 1142.0 26 1975.0 27 3544.0 28 6836.0 29 13110.0 30 24842.0 31 46044.0 32 79566.0 33 136658.0 34 196410.0 35 217134.0 36 403320.0 37 637676.0 38 597278.0 39 481771.0 40 547854.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 52.71088008941458 17.11923573615396 30.169884174431456 2 24.506008572823358 30.835841444577856 28.298031336325202 16.360118646273577 3 20.456235789741466 28.890909379992546 27.719904578905247 22.93295025136074 4 20.137066242991665 31.52261540010729 29.057943405703952 19.28237495119709 5 18.449236436913665 31.75180504511656 26.839185069460598 22.95977344850918 6 17.293777901572117 37.824594545733994 25.45250527483619 19.4291222778577 7 26.99794541965201 33.31644247263357 20.423494411883 19.26211769583142 8 21.13196836334921 31.691445490611294 27.02803686584927 20.14854928019023 9 24.046304316974226 34.2980066036297 24.17497322096838 17.480715858427693 10 21.60957437975405 30.100573739648333 24.145912303750478 24.143939576847135 11 21.239643919849577 32.65166294989215 26.83897896366473 19.26971416659355 12 21.86061123912571 31.04886650645376 27.712131446032373 19.37839080838815 13 19.749646234123226 33.16993069545396 25.34639023364742 21.7340328367754 14 19.835533463631457 31.1722355471255 28.086095690798906 20.906135298444138 15 18.10468643358653 34.95686794566109 28.11789487073339 18.82055075001899 16 22.90577372999081 38.1956438656732 20.090604107865172 18.80797829647082 17 20.7059182395974 36.31698953630318 23.731610210363353 19.24548201373607 18 22.547767962561764 33.167104101682 22.24049366460227 22.044634271153964 19 23.240754535652474 32.17296751713769 22.03856887201831 22.547709075191516 20 22.381970571625594 32.77679861167136 23.272877596123326 21.568353220579723 21 21.438889337087208 36.71397874283709 22.4213662223222 19.425765697753505 22 21.258487878329273 37.025169050918144 21.043696195345895 20.67264687540669 23 22.770362222103138 35.16556478582369 22.144742800577333 19.919330191495842 24 21.840618976926162 37.2704349480054 21.49492066987917 19.39402540518927 25 21.28121387059441 37.313750215175645 21.53227694252234 19.872758971707604 26 22.306913224412394 39.24857057503526 20.387863578683845 18.0566526218685 27 22.81164941922118 36.614693490725934 21.045558499995852 19.528098590057034 28 22.086835558104273 35.18851599994491 22.107933423400976 20.616715018549844 29 21.444550046275737 35.35724900879894 23.143615049718882 20.054585895206447 30 23.43925860215805 34.17677483103614 23.92759476089426 18.45637180591155 31 21.292699625133515 35.51360793670562 22.0705360478701 21.123156390290767 32 20.614918716606763 34.24918909876833 24.247562964389658 20.888329220235242 33 20.966726106151096 33.40308477810062 26.004600703522286 19.625588412225994 34 21.00298977353854 34.9967420002899 24.50967443032419 19.49059379584737 35 21.157228910112547 33.458211614260215 23.6239360919843 21.760623383642937 36 20.20152092823094 34.199883407418206 25.24470005595894 20.353895608391916 37 21.365617342899974 36.469905336221004 22.628654856394814 19.53582246448421 38 22.548489698824927 34.142456230591314 21.961110663882934 21.347943406700825 39 20.83876340431747 36.35333050595155 21.8807050853551 20.92720100437589 40 19.61993600674284 35.56002953534946 23.580293476547904 21.239740981359795 41 20.593061008474603 35.96842349297283 23.443847285858688 19.99466821269388 42 20.885088047930886 36.09577481527 22.986557119740983 20.032580017058134 43 21.21641234416393 34.02048787298694 22.817707165978963 21.94539261687016 44 21.424170295302382 33.010353190543036 22.860573758841575 22.704902755313007 45 20.66829249878495 32.91165770388045 26.19519108114952 20.224858716185075 46 21.21560654569463 33.727068847167565 24.78079712992704 20.276527477210763 47 20.80457973526738 34.937261787951485 23.234806573515552 21.023351903265585 48 22.043808611970345 32.67822948887907 23.961432709775618 21.316529189374968 49 21.012620046845733 31.771126196744632 22.80145303696642 24.414800719443214 50 19.35013430463949 34.952395685375556 25.648248414361458 20.049221595623496 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 293650.0 1 279284.5 2 169439.5 3 72390.0 4 67440.5 5 49545.0 6 25199.5 7 15185.0 8 13821.0 9 11259.5 10 9123.0 11 8174.0 12 7897.0 13 8178.5 14 9371.5 15 11028.0 16 13206.5 17 17350.0 18 23818.5 19 33222.0 20 44783.0 21 57352.0 22 65115.5 23 65988.0 24 65711.0 25 66666.0 26 67004.0 27 69057.0 28 73834.0 29 79284.0 30 85225.0 31 92454.0 32 102155.0 33 108847.0 34 121998.0 35 143268.5 36 155546.0 37 155960.0 38 154869.5 39 155940.0 40 157683.0 41 162720.5 42 168468.0 43 171238.5 44 171757.5 45 171681.5 46 180183.5 47 189147.0 48 198992.5 49 212671.5 50 231916.0 51 241322.0 52 227759.0 53 217822.0 54 211551.0 55 194657.5 56 177413.5 57 169108.5 58 162493.5 59 148588.5 60 128529.5 61 112100.0 62 100441.5 63 87357.0 64 72197.5 65 60672.5 66 45963.0 67 31136.0 68 22050.5 69 16193.0 70 12752.0 71 10177.0 72 7641.0 73 5207.0 74 3456.0 75 2288.0 76 1658.5 77 1296.0 78 985.0 79 825.5 80 580.5 81 326.5 82 192.5 83 147.0 84 117.5 85 87.5 86 66.0 87 46.5 88 21.5 89 5.0 90 4.0 91 4.0 92 3.5 93 3.0 94 2.0 95 1.0 96 1.0 97 1.0 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 38592.0 25 47125.0 26 54366.0 27 61595.0 28 62325.0 29 53694.0 30 43403.0 31 34232.0 32 27089.0 33 21161.0 34 22145.0 35 21311.0 36 20209.0 37 19540.0 38 21191.0 39 24601.0 40 32926.0 41 30835.0 42 38364.0 43 55089.0 44 123413.0 45 252992.0 46 377167.0 47 283589.0 48 555196.0 49 363094.0 50 711070.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.992769864172692 #Duplication Level Percentage of deduplicated Percentage of total 1 73.4283153976118 10.2746551887267 2 11.500443322507405 3.2184611349561534 3 4.00326555099862 1.6805032068088255 4 1.9069766770602878 1.067355431137975 5 1.0466221065258017 0.7322571135685589 6 0.7014230405353441 0.5888910710183606 7 0.545816671868711 0.5346240954241274 8 0.41847412602056405 0.46844897116132433 9 0.3506500369747931 0.44159087432267313 >10 3.282808719102042 10.494890031133755 >50 1.3602449778576688 13.924832071277041 >100 1.3697150081645464 31.327243263227494 >500 0.042469414707416046 4.023343343665255 >1k 0.03758084898569909 9.675356867837037 >5k 0.0021387475032511676 1.7350820476618178 >10k+ 0.003055353576073097 9.81246528807288 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAAAAAAAAAAAAAAAAAAAAAAAAAA 33931 0.9990536799600979 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAA 33194 0.9773536840233265 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAA 30562 0.8998579047755891 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAA 27331 0.8047253581382641 No Hit AAAAAAAAAAAAAAAAAAAAAAAAA 24923 0.7338249643584192 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 19564 0.576036255776115 No Hit AAAAAAAAAAAAAAAAAAAAAAAA 19409 0.5714724845818143 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 17618 0.5187388445237985 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA 12909 0.3800885312724324 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 10075 0.29664512762954187 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT 7165 0.21096400391718786 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 6100 0.17960647925957376 No Hit TAAAAAAAAAAAAAAAAAAAAAAAAAAAA 5619 0.1654440667146795 No Hit AGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAAAAAAAAAA 5589 0.1645607561609439 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA 5570 0.16400132614357799 No Hit TAAAAAAAAAAAAAAAAAAAAAAAAAAA 5461 0.1607919644650053 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 5080 0.14957392043256307 No Hit AGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAA 4950 0.14574624136637543 No Hit TAAAAAAAAAAAAAAAAAAAAAAAAAA 4699 0.13835587640012084 No Hit TAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4503 0.13258491411571485 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 4484 0.13202548409834897 No Hit AGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAAAAAAAAAAA 3987 0.11739197259146238 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACA 3826 0.11265153928641462 No Hit TAAAAAAAAAAAAAAAAAAAAAAAAA 3686 0.10852942336898178 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.1673284625626488 0.0 0.0 0.0 0.0 2 0.32155448524488606 0.0 0.0 0.0 0.0 3 0.4134776702036384 0.0 0.0 0.0 0.0 4 0.48708688301493913 0.0 0.0 0.0 0.0 5 0.5465925706515946 0.0 0.0 0.0 0.0 6 0.6512059838990152 0.0 0.0 0.0 0.0 7 0.7195447770730268 0.0 0.0 0.0 0.0 8 0.7914462561471054 0.0 0.0 0.0 0.0 9 0.8654382368650249 0.0 0.0 0.0 0.0 10 0.9417562687077814 0.0 0.0 0.0 0.0 11 1.0214897680249824 0.0 0.0 0.0 0.0 12 1.0966300524627581 0.0 0.0 0.0 0.0 13 1.1776296302403135 0.0 0.0 0.0 0.0 14 1.2417874201266432 0.0 0.0 0.0 0.0 15 1.3044141383864978 0.0 0.0 0.0 0.0 16 1.3524073451394658 0.0 0.0 0.0 0.0 17 1.3982217191932196 0.0 0.0 0.0 0.0 18 1.4358507487823564 0.0 0.0 0.0 0.0 19 1.474363088925229 0.0 0.0 0.0 0.0 20 1.5195885892764922 0.0 0.0 0.0 0.0 21 1.5670812533823433 0.0 0.0 0.0 0.0 22 1.6170471870386542 0.0 0.0 0.0 0.0 23 1.6618015884279251 0.0 0.0 0.0 0.0 24 1.7043182697477324 0.0 0.0 0.0 0.0 25 1.7494259953584974 0.0 0.0 0.0 0.0 26 1.7948576015056323 0.0 0.0 0.0 0.0 27 1.839376453413907 0.0 0.0 0.0 0.0 28 1.8884885202016068 0.0 0.0 0.0 0.0 29 1.9425765697753505 0.0 0.0 0.0 0.0 30 1.999579544176422 0.0 0.0 0.0 0.0 31 2.0514004299955775 0.0 0.0 0.0 0.0 32 2.1058712474759402 0.0 0.0 0.0 0.0 33 2.1594881980876917 0.0 0.0 0.0 0.0 34 2.205567565307566 0.0 0.0 0.0 0.0 35 2.244344898616559 0.0 0.0 0.0 0.0 36 2.2750546622014336 0.0 0.0 0.0 0.0 37 2.3017600846093735 0.0 0.0 0.0 0.0 38 2.3182191045939806 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTCGTAA 40 5.456968E-12 162.75473 44 CGTGCGT 30 2.491106E-8 155.00452 44 GCGATAT 65 1.8189894E-12 114.46487 44 TCGACGC 45 3.3287506E-10 94.90226 43 CTATCAT 1205 0.0 83.355125 44 GTCCGCA 60 3.6379788E-11 81.344795 43 TACGATT 30 3.9119186E-8 80.43323 42 TTCGACG 55 0.0 80.43323 42 TCGTGCG 325 0.0 75.087494 43 CCCCCGT 50 5.8595462E-5 74.40216 44 GTACGGG 30 1.1979137E-7 68.4383 41 CGTTAAC 20 8.86735E-5 68.43829 41 TCGTCTA 30 3.676516E-6 67.02769 42 ACCTTAG 2945 0.0 63.090237 42 ACGCCCC 45 0.0035983084 62.0018 44 TATCGAC 90 2.3704888E-7 62.0018 44 TCGCAAA 935 0.0 61.33484 43 CGCGATA 70 1.1008524E-8 61.008595 43 TTGCGAC 35 3.4794357E-7 58.661396 41 CGCAAAT 110 0.0 58.49689 42 >>END_MODULE