Basic Statistics
Measure | Value |
---|---|
Filename | ERR841046.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2002295 |
Sequences flagged as poor quality | 0 |
Sequence length | 24-50 |
%GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC | 26618 | 1.3293745427122377 | No Hit |
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA | 16944 | 0.8462289522772618 | No Hit |
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT | 10285 | 0.5136605744907718 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAA | 4196 | 0.20955953043882147 | No Hit |
ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT | 4027 | 0.20111921569998426 | No Hit |
ATAGGTGTATGAACATGAGGGTGTTTTCTCGTGTGAATGAGGGTTTTATG | 3912 | 0.19537580626231402 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAA | 3880 | 0.1937776401579188 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAAA | 3841 | 0.19182987521818715 | No Hit |
TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTTTCCG | 3170 | 0.15831832971665014 | No Hit |
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACC | 3164 | 0.15801867357207605 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAA | 3121 | 0.155871137869295 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 3052 | 0.1524250922066928 | No Hit |
AAGATAAAATTTGAAATCTGGTTAGGCTGGTGTTAGGGTTCTTTGTTTTT | 2762 | 0.13794171188561127 | No Hit |
TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 2472 | 0.1234583315645297 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAA | 2427 | 0.12121091048022395 | No Hit |
ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC | 2386 | 0.11916326015896758 | No Hit |
CTCTTTTCCGTGGCGCCTCGGAGGCGTTCAGCTGCTTCAAGATGAAGCT | 2232 | 0.11147208578156564 | No Hit |
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCC | 2151 | 0.10742672782981529 | No Hit |
CTCTCGGCCTTAGCGCCATTTTTTTGGAAACCTCTGCGCCATGAGAGCCA | 2081 | 0.10393073947645078 | No Hit |
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTT | 2058 | 0.10278205758891672 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ACGCTTA | 35 | 3.6379788E-12 | 173.36017 | 44 |
TACCGGC | 15 | 6.033992E-5 | 173.36017 | 44 |
TCGTAGG | 130 | 0.0 | 146.68938 | 44 |
CGCTAAA | 20 | 7.39407E-6 | 112.903404 | 43 |
TGTCGCG | 25 | 4.613136E-4 | 104.016106 | 44 |
CTTACGG | 25 | 4.613136E-4 | 104.016106 | 44 |
AATTACG | 30 | 9.521824E-4 | 86.680084 | 44 |
GTATAGC | 30 | 9.521824E-4 | 86.680084 | 44 |
CGGTAAT | 50 | 7.9659003E-7 | 86.680084 | 44 |
TCCCGTA | 20 | 0.0010450509 | 84.67755 | 43 |
CAGGTCG | 105 | 0.0 | 82.55247 | 44 |
CACGACT | 55 | 1.404258E-6 | 78.80008 | 44 |
CCGCACG | 55 | 1.404258E-6 | 78.80008 | 44 |
CGAGAAA | 290 | 0.0 | 77.71318 | 44 |
CGTGCGC | 170 | 0.0 | 76.48243 | 44 |
ACGCTAA | 30 | 6.049413E-8 | 75.52764 | 42 |
CGTCTTA | 20 | 5.440675E-5 | 75.52763 | 42 |
ACGTCCA | 45 | 1.8189894E-12 | 75.52763 | 42 |
CGTCCAA | 75 | 0.0 | 75.26894 | 43 |
CCTTAGC | 4705 | 0.0 | 73.18924 | 43 |