##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841041.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1589339 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.61930022481044 39.0 37.0 39.0 32.0 39.0 2 37.41858911157406 39.0 37.0 39.0 35.0 39.0 3 37.67611755578891 39.0 37.0 39.0 35.0 39.0 4 38.154284894537916 39.0 38.0 40.0 35.0 41.0 5 38.71197271318454 40.0 38.0 41.0 35.0 41.0 6 38.70204342811697 40.0 38.0 41.0 35.0 41.0 7 38.72295526630882 40.0 38.0 41.0 35.0 41.0 8 38.651609883102346 40.0 38.0 41.0 35.0 41.0 9 38.6496147140415 40.0 38.0 41.0 35.0 41.0 10 38.61982560045403 40.0 38.0 41.0 35.0 41.0 11 38.44090782394442 40.0 38.0 41.0 34.0 41.0 12 38.41094505325799 40.0 38.0 41.0 34.0 41.0 13 38.238614921045794 40.0 37.0 41.0 34.0 41.0 14 38.16636601757083 39.0 37.0 41.0 34.0 41.0 15 38.04535910840922 39.0 37.0 40.0 34.0 41.0 16 38.091823707843325 39.0 37.0 41.0 34.0 41.0 17 38.035818035044755 39.0 36.0 40.0 34.0 41.0 18 37.99040167012827 39.0 36.0 40.0 34.0 41.0 19 38.01820442334832 39.0 36.0 41.0 34.0 41.0 20 37.82953353563966 39.0 36.0 41.0 34.0 41.0 21 37.754857837126 39.0 36.0 40.0 34.0 41.0 22 37.64479761712259 39.0 35.0 40.0 33.0 41.0 23 37.512545781611095 39.0 35.0 40.0 33.0 41.0 24 37.232761544264626 38.0 35.0 40.0 33.0 41.0 25 37.160901913437044 38.0 35.0 40.0 33.0 41.0 26 36.98112769909553 38.0 35.0 40.0 32.0 41.0 27 36.86739818562171 38.0 35.0 40.0 32.0 41.0 28 36.61942744994142 37.0 35.0 40.0 32.0 41.0 29 36.60469319214918 37.0 35.0 40.0 32.0 41.0 30 36.483256327777234 37.0 35.0 40.0 32.0 41.0 31 36.41912497910295 37.0 34.0 40.0 32.0 41.0 32 36.37117943926342 37.0 34.0 40.0 32.0 41.0 33 36.17381942647908 37.0 34.0 39.0 31.0 41.0 34 35.93584836461841 36.0 34.0 39.0 31.0 41.0 35 35.73285572870698 36.0 34.0 39.0 31.0 41.0 36 35.708773565116985 36.0 34.0 39.0 31.0 41.0 37 35.54427729886227 35.0 34.0 39.0 31.0 41.0 38 35.27717438081225 35.0 34.0 38.0 30.0 40.0 39 35.20551728405247 35.0 34.0 38.0 31.0 40.0 40 34.98317399962031 35.0 33.0 38.0 30.0 40.0 41 34.88011372025182 35.0 33.0 38.0 30.0 40.0 42 34.77359759379631 35.0 33.0 37.0 30.0 40.0 43 34.580550594929456 35.0 33.0 37.0 29.0 40.0 44 34.16278382360903 35.0 32.0 37.0 29.0 40.0 45 34.007309984806575 35.0 32.0 37.0 29.0 39.0 46 33.80372518688126 35.0 32.0 37.0 28.0 39.0 47 33.88686753008787 35.0 32.0 36.0 29.0 39.0 48 34.5979769952706 35.0 34.0 36.0 30.0 39.0 49 35.140227391626794 35.0 34.0 37.0 31.0 39.0 50 35.52011607390233 36.0 34.0 38.0 31.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 5.0 21 26.0 22 47.0 23 126.0 24 244.0 25 465.0 26 980.0 27 2026.0 28 4320.0 29 8980.0 30 17125.0 31 31798.0 32 55502.0 33 93419.0 34 137532.0 35 167757.0 36 232054.0 37 274131.0 38 244860.0 39 214240.0 40 103702.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 46.25331663037275 17.37376355830946 36.372919811317786 2 23.61786881212882 23.530033554830027 33.55294244965989 19.299155183381266 3 26.497430692885533 23.708724192887733 20.26288916335659 29.53095595087014 4 21.77660020926939 28.515061921968822 26.562426266517086 23.145911602244706 5 14.521131111738905 29.165080577523106 27.38194935127119 28.9318389594668 6 19.456138684069288 30.04752290102993 24.276129887959712 26.220208526941075 7 21.510640587061665 25.176630032988555 21.35585925972999 31.956870120219786 8 19.196848501169352 26.85411985737467 29.349371027829807 24.599660613626167 9 18.529212458764306 31.50385160120025 29.12103711039621 20.84589882963924 10 32.32752735571203 20.94279445731842 25.654627489792926 21.075050697176625 11 19.93130477512979 22.795766038585853 25.598503528825507 31.674425657458855 12 17.28152395429798 28.01686738952483 25.95726902819348 28.744339627983713 13 22.82722565796221 25.1498264372799 25.195568723853125 26.827379180904764 14 16.63012107549113 26.423060152679824 22.753169713950264 34.19364905787878 15 20.284847977681288 35.41893831334914 23.698971710881064 20.597241998088514 16 18.07682313213229 38.03927293044467 20.5517513884703 23.33215254895274 17 19.04672319750538 39.723243436422315 18.790516057304327 22.439517308767982 18 18.275396249635854 31.135522377541857 20.21368631865197 30.37539505417032 19 24.098634715438305 22.823639261353303 23.186934945911478 29.890791077296914 20 19.5503287844821 23.868413220842125 28.35562457096944 28.22563342370633 21 18.316042077870108 38.38381868185453 21.415129182635045 21.885010057640315 22 24.734936976944503 28.305855453116042 19.198295643660668 27.760911926278787 23 28.086393148346577 23.550671065140918 26.51221671399242 21.850719072520086 24 19.532774316870093 28.41294399747316 25.874970663904932 26.17931102175181 25 20.96613715810034 24.62859599107442 23.53887873979911 30.866388111026126 26 20.28457787699642 33.80701550365429 27.629447601690103 18.278959017659183 27 22.1483092596166 31.45706154548022 20.07432331408373 26.32030588081945 28 20.9966959856676 25.526500921497185 20.874001175503736 32.602801917331476 29 22.23715162511364 31.34846993736979 25.576804449680512 20.83757398783606 30 23.181921564804885 31.297137472788123 27.285765344250578 18.235175618156415 31 23.37715977146004 32.58339971219437 20.706402200172423 23.33303831617317 32 20.20537542229201 31.088467334514576 23.768607370399923 24.93754987279349 33 19.008311609055873 23.91799831512474 30.257241978600756 26.816448097218633 34 22.22211849431534 32.865668656019736 23.786150101690396 21.12606274797453 35 18.64797471852088 26.928973637405 21.241445637040158 33.181606007033956 36 19.08249232622465 27.026257767357976 27.05472037511289 26.836529531304485 37 15.87353917203242 38.21454058028822 21.20300048027221 24.708919767407153 38 24.536488666838803 25.62567711385896 21.94579810291994 27.892036116382297 39 17.543313257982014 32.744960536809394 28.26856969996975 21.443156505238843 40 15.912885868653962 28.148925172971424 29.370152608393806 26.568036349980805 41 18.50284195669926 32.12100305012662 22.21365440714957 27.162500586024557 42 17.93852256946161 34.72981774052501 21.41100281561998 25.9206568743934 43 18.341363706907217 24.40730550630689 22.882309314685035 34.369021472100854 44 18.15907730713457 26.16876722110768 21.18691934778187 34.485236123975874 45 16.078538314698665 24.76551482332775 34.944797226226186 24.2111496357474 46 16.64228640702712 31.697987270876656 28.732325771657113 22.92740055043911 47 18.636051305542832 31.96851705326282 27.915816432765585 21.47961520842877 48 22.624321243707463 27.042107641418667 21.36314826144461 28.970422853429255 49 15.339448978692335 31.760090910658818 21.56636918849206 31.334090922156786 50 16.576621899470666 29.53358997914753 32.29435525030258 21.595432871079225 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 24854.0 1 19915.5 2 14494.0 3 12962.0 4 10191.0 5 6668.0 6 3552.5 7 2163.0 8 2048.0 9 2030.5 10 1874.5 11 1588.5 12 1438.0 13 1296.5 14 1285.0 15 1485.5 16 1596.5 17 1608.0 18 1707.5 19 2100.0 20 2734.5 21 3413.5 22 4065.5 23 5319.0 24 6831.5 25 8093.0 26 9716.5 27 12622.0 28 15827.0 29 17516.5 30 20002.0 31 29382.5 32 45100.5 33 54997.0 34 71225.0 35 87971.0 36 78277.5 37 65367.0 38 64334.0 39 68790.0 40 78257.5 41 86701.0 42 93962.0 43 98567.0 44 100729.0 45 107758.5 46 117884.0 47 120014.5 48 131964.0 49 166376.0 50 208909.5 51 226894.5 52 191982.5 53 137795.0 54 104220.0 55 92441.0 56 88085.5 57 81318.5 58 70066.0 59 61185.5 60 57253.0 61 53205.5 62 46536.5 63 36872.5 64 29895.0 65 26068.5 66 20394.5 67 13857.5 68 9553.0 69 7503.5 70 6193.5 71 4844.0 72 3475.0 73 2229.5 74 1360.0 75 892.5 76 639.5 77 454.5 78 297.5 79 188.5 80 132.5 81 102.0 82 72.0 83 92.0 84 101.0 85 79.0 86 76.5 87 50.0 88 25.0 89 25.0 90 22.0 91 10.0 92 1.0 93 1.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 7369.0 25 8341.0 26 8575.0 27 9976.0 28 8540.0 29 7688.0 30 13515.0 31 7724.0 32 10081.0 33 7880.0 34 8598.0 35 8405.0 36 8483.0 37 10230.0 38 9414.0 39 11218.0 40 14181.0 41 13447.0 42 17441.0 43 31451.0 44 83332.0 45 141816.0 46 181114.0 47 172682.0 48 266007.0 49 247523.0 50 274308.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.497549236623666 #Duplication Level Percentage of deduplicated Percentage of total 1 67.24477829508072 7.059053710584523 2 11.736282690063241 2.464044107877459 3 4.524180779311274 1.4247843145861956 4 2.407512408668212 1.0109192019110795 5 1.5387045669631858 0.8076313476156871 6 1.052841083692834 0.6631350668643445 7 0.7937050418291708 0.5832370429170717 8 0.6177862599781536 0.5188193345464205 9 0.4958869572564569 0.4685037974639236 >10 5.458989577486335 13.564145142503298 >50 2.386456482791492 18.017743747850336 >100 1.6275521609061225 28.573535765313895 >500 0.06882220566117318 4.870126635261505 >1k 0.03906125186174694 8.212468673002217 >5k 0.0037201192249282805 2.5543350457846676 >10k+ 0.0037201192249282805 9.20751706591739 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 40758 2.5644623330831244 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 30457 1.9163312546914157 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA 25784 1.6223096519999824 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC 17729 1.1154951838468696 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT 15494 0.9748706852345536 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA 11243 0.7074010012967655 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCTA 8839 0.5561431513352406 No Hit AGCTTTAATTTATTAATGCAAACAGTACCTAACAAACCCACAGGTCCT 6980 0.43917628649394497 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA 6729 0.42338355756701374 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTC 5746 0.3615339458730957 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAA 5735 0.3608418342468158 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGG 5216 0.32818674933415715 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACC 4554 0.28653421327986034 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACA 4312 0.27130775750170355 No Hit AGCTTTAATTTATTAATGCAAACAGTACCTAACAAACCCACAGGTC 4237 0.26658881459524997 No Hit CGCAATAGATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAG 3924 0.24689509286565042 No Hit AACACAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCG 3485 0.21927354705320892 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAA 3439 0.21637926207058408 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACT 3195 0.2010269678149218 No Hit AGCTTTAATTTATTAATGCAAACAGTACCTAACAAACCCACAGG 3152 0.1983214405485551 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCT 3054 0.1921553551507891 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAG 3012 0.1895127471231751 No Hit ACAACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAAT 3007 0.18919815092941153 No Hit CACTTAGGAGATTTCAACTTAACTTGACCGCTCTGACCAAAAAAAAAAAA 2991 0.1881914431093681 No Hit AATGCCCCAACTAAATACTACCGTATGGCCCACCATAATTACCCCCATAC 2945 0.18529715812674324 No Hit ATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGC 2814 0.1770547378501377 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2776 0.17466380677753457 No Hit CCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCTAG 2736 0.172147037227426 No Hit TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACCTG 2591 0.16302374760828242 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTT 2562 0.16119908968445373 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAA 2494 0.15692058144926915 No Hit CGCAATAGATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCA 2256 0.1419458026261232 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCC 2231 0.14037282165730533 No Hit AACACAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGAC 2227 0.14012114470229448 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCC 2211 0.13911443688225106 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATG 1990 0.12520928511790122 No Hit ATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACAT 1942 0.12218916165777094 No Hit CACTTAGGAGATTTCAACTTAACTTGACCGCTCTGACCAAAAAAAAAA 1844 0.11602307626000495 No Hit ACAACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAA 1837 0.11558264158873595 No Hit TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTTTCCG 1760 0.11073786020477695 No Hit CCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCT 1738 0.10935363695221724 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1731 0.10891320228094824 No Hit TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACCTGC 1676 0.10545264414954895 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAAG 1663 0.10463469404576367 No Hit TTGAGTTCCAGCCAGGAGGACCAGGGGCTGGG 1651 0.10387966318073111 No Hit AATGCCCCAACTAAATACTACCGTATGGCCCACCATAATTACCCCCAT 1648 0.10369090546447296 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.021770056608439104 0.0 0.0 0.0 0.0 2 0.039764958891715364 0.0 0.0 0.0 0.0 3 0.05587228401241019 0.0 0.0 0.0 0.0 4 0.07298631695314844 0.0 0.0 0.0 0.0 5 0.0905407845651557 0.0 0.0 0.0 0.0 6 0.11954655363015694 0.0 0.0 0.0 0.0 7 0.13911443688225106 0.0 0.0 0.0 0.0 8 0.16661014421718714 0.0 0.0 0.0 0.0 9 0.1859263505142704 0.0 0.0 0.0 0.0 10 0.20385833355879393 0.0 0.0 0.0 0.0 11 0.21977690096323063 0.0 0.0 0.0 0.0 12 0.24645465819438145 0.0 0.0 0.0 0.0 13 0.2640091258063887 0.0 0.0 0.0 0.0 14 0.28288489743220296 0.0 0.0 0.0 0.0 15 0.3092480584695902 0.0 0.0 0.0 0.0 16 0.33517078483570845 0.0 0.0 0.0 0.0 17 0.36423947313946237 0.0 0.0 0.0 0.0 18 0.40985592123518017 0.0 0.0 0.0 0.0 19 0.4296125622035324 0.0 0.0 0.0 0.0 20 0.44842541459059393 0.0 0.0 0.0 0.0 21 0.4708246635865602 0.0 0.0 0.0 0.0 22 0.4890083235860946 0.0 0.0 0.0 0.0 23 0.5110929763882973 0.0 0.0 0.0 0.0 24 0.5302833442078752 0.0 0.0 0.0 0.0 25 0.5531230278751104 0.0 0.0 0.0 0.0 26 0.5780390464211852 0.0 0.0 0.0 0.0 27 0.6012562455209367 0.0 0.0 0.0 0.0 28 0.6263610217832697 0.0 0.0 0.0 0.0 29 0.6514657980456026 0.0 0.0 0.0 0.0 30 0.673613370086558 0.0 0.0 0.0 0.0 31 0.6976485192900949 0.0 0.0 0.0 0.0 32 0.7201106875248138 0.0 0.0 0.0 0.0 33 0.7435166443408234 0.0 0.0 0.0 0.0 34 0.7664192472468114 0.0 0.0 0.0 0.0 35 0.7848545842013567 0.0 0.0 0.0 0.0 36 0.8005214746507825 0.0 0.0 0.0 0.0 37 0.8173838306365099 0.0 0.0 0.0 0.0 38 0.8278284242694605 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGATTC 10 0.0018840465 225.79662 44 ACGATAG 10 0.0018840465 225.79662 44 TGCTCTA 10 0.0018840465 225.79662 44 GTCTATC 15 2.1025604E-5 225.7966 44 GGCTCGA 30 2.910383E-11 225.7966 44 CTATCAT 4530 0.0 173.21043 44 GACGACT 20 6.621654E-5 169.34746 44 GGTAGTA 40 4.3550244E-8 141.12288 44 AATCGCA 185 0.0 140.36006 44 ACTTCTA 1730 0.0 133.78123 44 GAACACA 1225 0.0 122.57531 44 AACGTTC 15 2.568636E-4 120.51063 43 TATCGAA 15 2.568636E-4 120.51063 43 GCGCAAA 50 1.6487684E-7 112.898315 44 CCCCCAG 60 3.7016434E-9 112.8983 44 TCGTCAC 125 0.0 108.38238 44 CCCATAC 820 0.0 106.01427 44 ATCGTCA 70 0.0 103.29483 43 TCGTGCG 270 0.0 102.65721 43 CAGTTAT 45 1.3264329E-5 100.35406 44 >>END_MODULE