##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841038.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2054885 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.414695226253535 39.0 35.0 39.0 32.0 39.0 2 37.13717312647666 39.0 37.0 39.0 33.0 39.0 3 37.38315331514902 39.0 37.0 39.0 34.0 39.0 4 37.907015234429174 39.0 37.0 39.0 35.0 41.0 5 38.72034542078997 40.0 38.0 41.0 35.0 41.0 6 38.530876423741475 40.0 37.0 41.0 35.0 41.0 7 38.69773101657757 40.0 38.0 41.0 35.0 41.0 8 38.536562386702904 40.0 37.0 41.0 35.0 41.0 9 38.52745287449176 40.0 37.0 41.0 35.0 41.0 10 38.51473294125949 40.0 37.0 41.0 35.0 41.0 11 38.47064580256316 40.0 37.0 41.0 35.0 41.0 12 38.496358677006256 40.0 37.0 41.0 35.0 41.0 13 38.41332726648937 40.0 37.0 41.0 34.0 41.0 14 38.35975589874859 40.0 37.0 41.0 35.0 41.0 15 38.10790628186005 40.0 36.0 41.0 34.0 41.0 16 38.120391652087584 40.0 36.0 41.0 34.0 41.0 17 38.11951617730433 40.0 36.0 41.0 34.0 41.0 18 37.99670979154551 39.0 35.0 41.0 34.0 41.0 19 38.044325108217734 40.0 35.0 41.0 34.0 41.0 20 38.003858610092536 40.0 35.0 41.0 34.0 41.0 21 37.8898142718449 39.0 35.0 41.0 34.0 41.0 22 37.78051034486115 39.0 35.0 41.0 34.0 41.0 23 37.72545860230621 39.0 35.0 41.0 33.0 41.0 24 37.54265226521192 39.0 35.0 41.0 33.0 41.0 25 37.489123997160675 39.0 35.0 40.0 33.0 41.0 26 37.355991495903055 39.0 35.0 40.0 33.0 41.0 27 37.26496383338704 38.0 35.0 40.0 33.0 41.0 28 37.17818619808693 38.0 35.0 40.0 33.0 41.0 29 36.98347859699632 38.0 35.0 40.0 32.0 41.0 30 36.978924637266644 38.0 35.0 40.0 32.0 41.0 31 36.91976080040659 38.0 35.0 40.0 32.0 41.0 32 36.821942182637486 38.0 35.0 40.0 32.0 41.0 33 36.70114257478669 38.0 35.0 40.0 32.0 41.0 34 36.63005969797361 38.0 35.0 40.0 32.0 41.0 35 36.52670530359117 37.0 35.0 40.0 31.0 41.0 36 36.51299868569172 37.0 35.0 40.0 32.0 41.0 37 36.37511441641429 37.0 34.0 40.0 31.0 41.0 38 36.32524719491575 37.0 34.0 40.0 31.0 41.0 39 36.149636054030196 37.0 34.0 40.0 31.0 41.0 40 36.083257410516005 36.0 34.0 40.0 31.0 41.0 41 35.8774970675008 36.0 34.0 39.0 31.0 41.0 42 35.81256813602262 36.0 34.0 39.0 31.0 41.0 43 35.54139089006614 36.0 34.0 39.0 30.0 41.0 44 35.389519292908666 36.0 34.0 39.0 29.0 41.0 45 35.03950179989975 35.0 33.0 39.0 29.0 41.0 46 34.78736807141937 35.0 33.0 39.0 28.0 41.0 47 34.68891684089454 35.0 33.0 38.0 28.0 40.0 48 35.50361693410262 36.0 34.0 39.0 31.0 41.0 49 36.271053596377364 36.0 35.0 39.0 32.0 41.0 50 36.274009919720434 37.0 35.0 39.0 31.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 8.0 21 25.0 22 61.0 23 162.0 24 364.0 25 780.0 26 1423.0 27 2736.0 28 5399.0 29 10683.0 30 19434.0 31 36874.0 32 67723.0 33 119917.0 34 195012.0 35 138808.0 36 229458.0 37 339875.0 38 306633.0 39 285311.0 40 294199.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 47.06336364322091 19.307309168152962 33.62932718862613 2 22.19077953267458 21.67892607128866 35.512060285612094 20.618234110424673 3 20.330626774734352 25.824608189752713 28.76968784141205 25.075077194100885 4 18.881835236521752 27.277438883441167 32.10140713470583 21.739318745331246 5 16.088929550802114 28.507970032386243 31.344576460483193 24.058523956328457 6 18.049866537543462 29.96148202940797 26.56893208135735 25.41971935169121 7 22.76521557167433 26.80680427371848 22.93520075332683 27.492779401280366 8 22.077439856731644 27.581786815320562 30.162661170819778 20.178112157128012 9 21.78642600437494 30.954919618372806 26.258160432335632 21.000493944916627 10 25.928847599744024 24.80751964221842 25.478554760972028 23.785077997065528 11 23.828292094204787 25.531161111205737 24.888108093640277 25.752438700949202 12 22.258131233621345 26.067103511875363 25.411105730977646 26.263659523525646 13 22.500626555743995 24.77111857841193 25.470427785496515 27.257827080347564 14 19.19134160792453 27.155728909403688 25.368524272647864 28.284405210023916 15 20.811188947313354 34.04866939025785 24.438885874391996 20.7012557880368 16 19.508439645040966 35.791297323207864 23.08231360879076 21.617949422960407 17 20.584752918046508 35.68613328726425 22.1260070514895 21.60310674319974 18 20.088569433325954 28.471374310484528 23.059051966411744 28.381004289777774 19 22.299885395046438 27.113828754407184 23.328166783055988 27.258119067490394 20 21.8456507298462 25.10938568338374 25.824267538086072 27.22069604868399 21 21.608508505342147 32.01629288257007 23.803521851587803 22.57167676049998 22 23.85432761444071 27.564608238417236 22.680149984062368 25.900914163079687 23 24.14105898870253 27.46241273842575 27.06969003131562 21.326838241556096 24 22.66292274263523 28.289904301213937 24.3196577910686 24.72751516508223 25 23.116165987942168 28.27359039135779 23.451878653563437 25.158364967136603 26 23.688326032534494 33.70721524414701 22.559320225485024 20.04513849783347 27 23.718653983407638 28.551178882662587 23.53785827309715 24.192308860832625 28 24.515494714396354 27.067018034419288 22.245803200531075 26.171684050653283 29 22.67789359476898 28.429603208990212 27.27722950812178 21.615273688119025 30 24.472065162067114 29.60879078972255 27.21524015723614 18.703903890974196 31 24.825850762906278 31.168383298425066 23.827255538315416 20.178510400353236 32 22.818402280297516 27.670236624125643 24.83977407584418 24.671587019732662 33 22.24431745084891 26.846700479892966 29.97606048783254 20.932921581425585 34 22.421021637277587 31.506553138491583 25.317375107641897 20.755050116588933 35 21.81712411628547 26.17503495472518 24.84145963055237 27.166381298436974 36 20.83106289658971 27.02915428307511 26.31183022116063 25.82795259917455 37 22.208643789493205 35.41884763129722 22.628359314439486 19.744149264770094 38 27.61123432381165 26.827811169594224 22.322491037337695 23.23846346925643 39 20.56407942484479 33.08331882932759 24.269775598024253 22.082826147803367 40 19.61414897073952 28.212112498096204 26.047143808354495 26.12659472280978 41 20.171984413322434 33.940956794511784 23.784623484875414 22.10243530729037 42 20.943268791529693 34.01193308727296 22.655770508067025 22.38902761313032 43 21.392376763040943 26.25211655703696 25.39278305120139 26.962723628720713 44 21.37739790897304 26.542538819844335 24.518046114602072 27.562017156580552 45 21.908470920606955 25.618360496377417 30.75231252942874 21.72085605358689 46 21.08328870752357 28.31883841841611 28.050880201731253 22.54699267232906 47 20.863474148306974 32.66467063444847 25.579241912467594 20.89261330477696 48 25.751380998118368 26.650265165072096 24.82678152835256 22.771572308456978 49 19.527721117083093 27.318822218793482 24.876034578673277 28.277422085450148 50 20.42233335855685 28.35948553202125 27.389297433392723 23.82888367602918 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 73206.0 1 65376.5 2 47747.5 3 36566.0 4 32214.0 5 21811.5 6 10647.0 7 7116.0 8 7226.0 9 6891.0 10 6348.0 11 5899.0 12 5495.0 13 4969.5 14 4641.5 15 4653.5 16 4745.5 17 5088.0 18 6062.0 19 7392.0 20 8277.0 21 9155.5 22 10512.5 23 12419.0 24 14068.5 25 15988.5 26 18948.0 27 22416.5 28 25456.0 29 29359.0 30 34607.0 31 43365.0 32 56700.5 33 61672.0 34 62878.5 35 68643.5 36 71949.5 37 75125.5 38 78847.5 39 83504.5 40 90559.0 41 100544.0 42 109563.0 43 114037.0 44 116636.0 45 123733.5 46 135869.5 47 141500.5 48 155605.0 49 181910.0 50 212239.0 51 230964.5 52 211511.0 53 176532.5 54 157158.0 55 147724.5 56 142666.5 57 139107.5 58 132489.0 59 117759.5 60 95748.0 61 77183.5 62 63161.0 63 49201.5 64 35062.5 65 26215.5 66 18899.5 67 12840.0 68 9430.5 69 6672.5 70 4730.0 71 3447.5 72 2579.0 73 1890.5 74 1386.0 75 1016.5 76 760.5 77 481.0 78 253.5 79 166.5 80 106.5 81 82.5 82 61.5 83 36.0 84 15.5 85 8.5 86 5.0 87 3.0 88 1.5 89 1.0 90 0.5 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 13556.0 25 16893.0 26 16645.0 27 19371.0 28 19701.0 29 17768.0 30 16834.0 31 15420.0 32 14314.0 33 12694.0 34 12830.0 35 12478.0 36 11315.0 37 10469.0 38 11770.0 39 14094.0 40 18221.0 41 16397.0 42 21819.0 43 33863.0 44 82508.0 45 170695.0 46 239779.0 47 193270.0 48 335734.0 49 270346.0 50 436101.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.120670315671337 #Duplication Level Percentage of deduplicated Percentage of total 1 69.35096603020072 8.40580195325385 2 11.403150163992606 2.7642764739569583 3 4.225280585779154 1.5363969891430735 4 2.1237476622536864 1.029649809914186 5 1.3128958125556252 0.795658865140608 6 0.8979633490025223 0.6530350625289414 7 0.6865528008235423 0.5825036107158047 8 0.5519612920177603 0.5352112678047413 9 0.4183402894375738 0.456350825523182 >10 5.0447622939652685 14.819996791729704 >50 2.327167658726208 20.287493385797365 >100 1.5666178018972778 30.908388675733615 >500 0.05833386455583658 4.936677666402638 >1k 0.02872500906158619 6.757427061354663 >5k 0.001767692865328381 1.2144578439558507 >10k+ 0.001767692865328381 4.316673717044858 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 34082 1.658584300337975 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA 21409 1.0418587901512737 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT 14581 0.7095774216075352 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 10517 0.5118047968621116 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC 5914 0.2878019937855403 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAA 5763 0.28045365069091455 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAA 5514 0.26833618426335293 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAA 5482 0.26677891950157795 No Hit AAAAAAAAAAAAAAAAAAAAAAAAA 4432 0.2156811695058361 No Hit TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTTTCCG 4163 0.2025904126021651 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4131 0.2010331478403901 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCC 3997 0.19451210165045732 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA 3893 0.1894509911746886 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3736 0.18181066093723006 No Hit AAAAAAAAAAAAAAAAAAAAAAAA 3609 0.17563026641393556 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACC 3596 0.1749976276044645 No Hit AAGATAAAATTTGAAATCTGGTTAGGCTGGTGTTAGGGTTCTTTGTTTTT 3160 0.15377989522528024 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCTA 2967 0.14438764213082483 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2824 0.13742861522664285 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTT 2584 0.12574912951333042 No Hit ATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGC 2543 0.12375388403730622 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAG 2508 0.12205062570411482 No Hit ACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2364 0.11504293427612737 No Hit ACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2356 0.11465361808568363 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2276 0.11076045618124615 No Hit CCTTTCCGGCGGTGACGACCTACGCACACGAGAACATGCCTCTCGCAAA 2264 0.11017648189558053 No Hit TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTTTC 2204 0.10725661046725242 No Hit AAAGATAAAATTTGAAATCTGGTTAGGCTGGTGTTAGGGTTCTTTGTTTT 2125 0.10341211308662042 No Hit ACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2113 0.10282813880095479 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.10200084189626184 0.0 0.0 0.0 0.0 2 0.17533827927110276 0.0 0.0 0.0 0.0 3 0.22132625426727043 0.0 0.0 0.0 0.0 4 0.2582139633118155 0.0 0.0 0.0 0.0 5 0.28906727140448246 0.0 0.0 0.0 0.0 6 0.3418196152096103 0.0 0.0 0.0 0.0 7 0.3750088204449397 0.0 0.0 0.0 0.0 8 0.4120911875847067 0.0 0.0 0.0 0.0 9 0.4492708837720846 0.0 0.0 0.0 0.0 10 0.48572061210238043 0.0 0.0 0.0 0.0 11 0.5227056501945364 0.0 0.0 0.0 0.0 12 0.5620265854293549 0.0 0.0 0.0 0.0 13 0.6013961851879789 0.0 0.0 0.0 0.0 14 0.6331254547091443 0.0 0.0 0.0 0.0 15 0.6647087306588934 0.0 0.0 0.0 0.0 16 0.6973139616085572 0.0 0.0 0.0 0.0 17 0.7317197799390234 0.0 0.0 0.0 0.0 18 0.7651523077933802 0.0 0.0 0.0 0.0 19 0.7925017701720535 0.0 0.0 0.0 0.0 20 0.8203865423125868 0.0 0.0 0.0 0.0 21 0.8458380882628468 0.0 0.0 0.0 0.0 22 0.8716302858797451 0.0 0.0 0.0 0.0 23 0.8992717354012512 0.0 0.0 0.0 0.0 24 0.9244799587324838 0.0 0.0 0.0 0.0 25 0.9525107244444336 0.0 0.0 0.0 0.0 26 0.9801521739659397 0.0 0.0 0.0 0.0 27 1.008864243011166 0.0 0.0 0.0 0.0 28 1.0385496025325018 0.0 0.0 0.0 0.0 29 1.0680403039586157 0.0 0.0 0.0 0.0 30 1.0988936120512827 0.0 0.0 0.0 0.0 31 1.1278003391917308 0.0 0.0 0.0 0.0 32 1.1548578144275714 0.0 0.0 0.0 0.0 33 1.183180567282354 0.0 0.0 0.0 0.0 34 1.2120872944228023 0.0 0.0 0.0 0.0 35 1.2370035306112022 0.0 0.0 0.0 0.0 36 1.2571993079904715 0.0 0.0 0.0 0.0 37 1.2798769760838198 0.0 0.0 0.0 0.0 38 1.2930163975112963 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGACAA 10 0.0034231339 184.96472 44 ATCGACT 20 1.4665237E-4 138.72354 44 GACTAAG 40 1.4330726E-7 115.60295 44 ACCGATT 15 3.1219862E-4 114.74942 43 ATCCCGT 20 6.8214013E-6 114.74941 43 CGAGTGC 50 4.1763997E-9 110.97884 44 GATGCGT 25 3.5649465E-4 110.97884 44 CTATCAT 2060 0.0 106.39962 44 ACGAACA 150 0.0 104.81335 44 TACGCTT 20 9.798558E-4 86.06206 43 CCCGAGA 140 0.0 85.87648 44 ACGATTG 15 0.001424457 78.32595 42 CGCTATA 20 4.5429144E-5 78.32594 42 CGAGTCG 95 5.2750693E-11 77.87988 44 GGATGCG 30 5.1054114E-5 76.49961 43 CCTTAGC 6085 0.0 76.468185 43 AACTACC 540 0.0 75.356 44 GGCACGG 105 1.2732926E-10 70.46275 44 CCGTTAA 45 1.4188117E-10 69.62306 42 CCGATTT 40 0.0023062534 69.36177 44 >>END_MODULE