##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841030.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1847080 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 35.78818946661758 38.0 35.0 39.0 30.0 39.0 2 36.990736730406915 39.0 37.0 39.0 33.0 39.0 3 36.9843119951491 38.0 37.0 39.0 33.0 39.0 4 37.22969172964896 38.0 36.0 39.0 33.0 40.0 5 37.83699893886567 39.0 37.0 40.0 33.0 41.0 6 37.69237174350867 39.0 36.0 40.0 33.0 41.0 7 37.79152067046365 39.0 36.0 40.0 33.0 41.0 8 37.71404649500834 39.0 36.0 40.0 33.0 41.0 9 37.844227645797694 39.0 37.0 40.0 33.0 41.0 10 37.845054897459775 39.0 37.0 40.0 34.0 41.0 11 37.764136366589426 39.0 36.0 40.0 33.0 41.0 12 37.755186023344955 39.0 36.0 40.0 33.0 41.0 13 37.668943954782684 39.0 36.0 40.0 33.0 41.0 14 37.634213461246944 39.0 36.0 40.0 33.0 41.0 15 37.47407042467029 38.0 36.0 40.0 33.0 41.0 16 37.48758743530329 38.0 36.0 40.0 33.0 41.0 17 37.5238533252485 38.0 36.0 40.0 33.0 41.0 18 37.61084793295363 39.0 36.0 40.0 33.0 41.0 19 37.76602042142192 39.0 37.0 40.0 34.0 41.0 20 37.760632457717044 39.0 36.0 40.0 33.0 41.0 21 37.702372934577824 39.0 36.0 40.0 33.0 41.0 22 37.59375554929944 39.0 36.0 40.0 33.0 41.0 23 37.50927355609936 39.0 36.0 40.0 33.0 41.0 24 37.37020811226368 38.0 36.0 40.0 33.0 41.0 25 37.32929705860087 38.0 36.0 40.0 33.0 41.0 26 37.179472873116374 38.0 35.0 40.0 33.0 41.0 27 37.02957209394729 38.0 35.0 40.0 32.0 41.0 28 36.989112736343 38.0 35.0 40.0 32.0 41.0 29 36.869456432057504 38.0 35.0 40.0 32.0 41.0 30 36.9145512546727 38.0 35.0 40.0 32.0 41.0 31 36.88916673288006 38.0 35.0 40.0 32.0 41.0 32 36.76846957028638 38.0 35.0 40.0 31.0 41.0 33 36.67705956148243 38.0 35.0 40.0 31.0 41.0 34 36.60868466431915 38.0 35.0 40.0 31.0 41.0 35 36.49789524214485 38.0 34.0 40.0 31.0 41.0 36 36.564477624208834 38.0 34.0 40.0 31.0 41.0 37 36.39071300937899 38.0 34.0 40.0 31.0 41.0 38 36.33452643237385 38.0 34.0 40.0 31.0 41.0 39 36.27197755274858 37.0 34.0 40.0 31.0 41.0 40 36.13056814482054 37.0 34.0 40.0 31.0 41.0 41 35.922126814929115 37.0 34.0 40.0 30.0 41.0 42 35.83566043383098 37.0 34.0 40.0 30.0 41.0 43 35.66913574098686 36.0 34.0 39.0 30.0 41.0 44 35.42055561774598 36.0 33.0 39.0 29.0 41.0 45 35.18049113709323 36.0 33.0 39.0 29.0 40.0 46 34.84314842716021 36.0 32.0 39.0 28.0 40.0 47 34.80261212104595 36.0 33.0 39.0 28.0 40.0 48 35.51588697436276 36.0 34.0 39.0 30.0 40.0 49 36.1997724449006 37.0 34.0 39.0 31.0 40.0 50 35.62828777921733 36.0 34.0 39.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 3.0 21 20.0 22 66.0 23 132.0 24 298.0 25 572.0 26 943.0 27 2037.0 28 4358.0 29 9675.0 30 19581.0 31 38309.0 32 66025.0 33 103268.0 34 139979.0 35 178787.0 36 256499.0 37 342530.0 38 324292.0 39 256493.0 40 103212.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 55.150995084132795 15.336422894514584 29.512582021352625 2 24.321415423262664 25.4089156939602 31.142614288498606 19.127054594278537 3 24.82404660328735 23.865993893063646 25.27362106676484 26.036338436884165 4 19.64392446456028 26.38894904389631 30.387097472767827 23.58002901877558 5 17.6966888277714 26.489431968295907 29.60922104077788 26.204658163154814 6 20.71464148818676 29.674838122875023 27.679580743660264 21.930939645277952 7 24.377395673170625 27.679093488100136 24.6531823202027 23.29032851852654 8 22.188697836585312 27.07863221950322 26.793046321761913 23.939623622149554 9 21.86846265456829 28.67742599129437 27.576769820473395 21.877341533663948 10 25.6786928557507 24.50310760768348 26.869816142235315 22.94838339433051 11 22.918065270589256 25.198637850011913 26.651363232778223 25.231933646620615 12 21.766193126448233 27.060820321805227 26.87225242003595 24.30073413171059 13 22.070457153994415 25.616053446520997 28.33347770535115 23.980011694133445 14 18.892305693310522 27.961972410507396 26.579357688892742 26.566364207289343 15 20.707874049851657 30.289971197782446 27.712281005695477 21.28987374667042 16 22.256805335989778 32.53519067934253 22.718236351430367 22.489767633237324 17 21.82991532581155 35.0397925374104 21.1742317604002 21.95606037637785 18 21.459167984061327 29.325367607250364 23.92213656149165 25.293327847196657 19 23.547003919700284 24.61550122355285 27.010145743551984 24.82734911319488 20 22.625008120926 25.753730212010307 27.85071572427832 23.770545942785372 21 21.58666652229465 29.71500963683219 25.89525088247396 22.803072958399202 22 25.548812179223425 28.64992312190051 23.164670723520366 22.636593975355694 23 24.434891829265652 27.46421378608398 26.095946033739743 22.004948350910627 24 22.14121748922624 29.525521363449336 24.868874114819064 23.46438703250536 25 22.552433174899612 27.84773587916556 26.152947090543595 23.44688385539124 26 23.166656517161716 31.63348327169566 27.061103860158475 18.138756350984146 27 23.14169352346475 30.29518564301797 25.163127455741467 21.399993377775818 28 23.04346739181761 29.78342689373002 23.518667174050115 23.65443854040226 29 23.683060873456487 30.78353773650869 24.665594540547346 20.867806849487476 30 23.964634059188207 30.950262706680693 25.49202988953208 19.593073344599023 31 24.3890396031737 30.038990226903824 23.77138219503059 21.800587974891883 32 22.520216942798196 29.489418609302938 25.646456391411444 22.343908056487425 33 20.835229321441695 27.654968948034757 27.715390969067844 23.794410761455705 34 21.646741729339652 30.751814980654697 25.223840368647565 22.377602921358083 35 20.443127792077807 28.474454474877938 25.80928333242925 25.27313440061501 36 21.916297748916733 28.471623668666844 27.106941133644124 22.5051374487723 37 18.668941939161297 30.991541047736966 24.7036173757972 25.635899637304536 38 21.668889709297478 28.487358429896748 25.669890078481345 24.17386178232443 39 21.199336219145966 29.897646142957395 27.45239637713252 21.450621260764116 40 20.391045423437234 29.095668950553637 27.079373075745195 23.433912550263937 41 20.17266088688905 30.295552370791206 25.730000073244153 23.801786669075586 42 19.95478412529884 31.629311119952014 25.606398951573073 22.809505803176073 43 20.915149043983305 26.735785807439594 26.431628387610846 25.917436760966257 44 20.18410768894158 29.005197706190945 24.38495082150726 26.42574378336022 45 19.002842464650367 28.389350554535596 29.00635863905262 23.601448341761415 46 19.444838564621822 31.49275456972962 27.00038511171618 22.06202175393238 47 22.27121091643589 29.84489960059591 26.276493652491016 21.607395830477184 48 21.027551165442617 30.37474489159317 24.69286629552756 23.904837647436654 49 18.80098044511668 32.492943766205705 24.280871866897147 24.425203921780465 50 19.175655214398326 30.595143322458622 28.191519806024278 22.037681657118775 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 22307.0 1 18751.5 2 15125.5 3 14442.5 4 12540.5 5 8842.0 6 5218.5 7 4114.5 8 4102.5 9 3910.0 10 3569.5 11 3043.5 12 2681.0 13 2642.0 14 2969.0 15 3312.5 16 3768.5 17 4651.0 18 5322.5 19 5935.5 20 7002.0 21 8552.5 22 10011.5 23 11866.0 24 14111.5 25 16205.0 26 18858.0 27 22598.5 28 26627.5 29 31822.0 30 37620.0 31 43745.0 32 52951.5 33 63537.5 34 83644.5 35 106378.0 36 109441.5 37 101679.0 38 98889.0 39 103961.5 40 113243.0 41 120935.5 42 127297.0 43 134107.0 44 138743.0 45 140096.5 46 144816.5 47 143945.0 48 147897.0 49 168379.0 50 187091.0 51 189914.5 52 174999.0 53 149169.0 54 126417.5 55 114986.0 56 105040.0 57 93822.0 58 81758.5 59 68123.0 60 56120.0 61 45645.5 62 37762.5 63 31936.5 64 26425.5 65 22349.5 66 17640.0 67 12741.5 68 9133.0 69 6871.5 70 5266.5 71 4249.5 72 3568.0 73 2703.5 74 1897.5 75 1292.5 76 960.5 77 737.5 78 553.5 79 468.0 80 413.5 81 259.5 82 138.0 83 86.0 84 39.5 85 26.0 86 8.0 87 2.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 10981.0 25 13350.0 26 10669.0 27 11995.0 28 12360.0 29 10648.0 30 15097.0 31 12210.0 32 13648.0 33 10897.0 34 10776.0 35 11269.0 36 11954.0 37 11846.0 38 10757.0 39 13112.0 40 17155.0 41 14590.0 42 17361.0 43 34173.0 44 81976.0 45 158175.0 46 237951.0 47 172463.0 48 329283.0 49 208006.0 50 384378.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.843804184881638 #Duplication Level Percentage of deduplicated Percentage of total 1 68.19549129002262 8.758895364208517 2 11.363869030418408 2.9191061721866958 3 4.2658873884277835 1.6437066687516773 4 2.2596425018223414 1.1608962328496881 5 1.4320309714342787 0.9196362691893852 6 1.0141386723006407 0.7815239114007164 7 0.7577769313409465 0.681291696537453 8 0.6078291964794299 0.6245471341948596 9 0.506353149770872 0.5853150633649611 >10 5.4527288034133585 17.240361095385484 >50 2.627287257559862 24.095841182860607 >100 1.4511099292309928 28.84524937523375 >500 0.04098660225374749 3.6130423723207525 >1k 0.02210513379977393 5.214613132508838 >5k 0.001842094483314494 1.6039958590235441 >10k+ 9.21047241657247E-4 1.3119784699830823 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 11773 0.6373844121532365 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA 10408 0.5634839855339238 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT 9334 0.5053381553587284 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC 6950 0.3762695714316651 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAA 5814 0.31476709184225915 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA 5020 0.27178032353769194 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA 4807 0.2602486086146783 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGG 4279 0.23166294908720791 No Hit ACAACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAAT 3423 0.18531953136843018 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAG 3250 0.17595339671264915 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACA 3192 0.17281330532516187 No Hit AGCTTTAATTTATTAATGCAAACAGTACCTAACAAACCCACAGGTCCT 3035 0.1643134027762739 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAA 2862 0.1549472681204929 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCTA 2781 0.15056196807934685 No Hit ATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGC 2742 0.14845052731879507 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCC 2663 0.14417350629101067 No Hit ATGACCCACCAATCACATGCCTATCATATAGTAAAACCCAGCCCATGACC 2241 0.12132663447170669 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACC 2190 0.11856551963098513 No Hit ACAACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAA 2159 0.11688719492387986 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAA 1900 0.10286506269354874 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.03053468176797973 0.0 0.0 0.0 0.0 2 0.06442601295017 0.0 0.0 0.0 0.0 3 0.08797669835632457 0.0 0.0 0.0 0.0 4 0.10681724668124824 0.0 0.0 0.0 0.0 5 0.12289668016545033 0.0 0.0 0.0 0.0 6 0.1503454100526236 0.0 0.0 0.0 0.0 7 0.17243432877839618 0.0 0.0 0.0 0.0 8 0.19809645494510253 0.0 0.0 0.0 0.0 9 0.21850704896376985 0.0 0.0 0.0 0.0 10 0.23583169110163069 0.0 0.0 0.0 0.0 11 0.2544556813998311 0.0 0.0 0.0 0.0 12 0.27405418281828614 0.0 0.0 0.0 0.0 13 0.2926781731164866 0.0 0.0 0.0 0.0 14 0.3130887671351539 0.0 0.0 0.0 0.0 15 0.33550252290101135 0.0 0.0 0.0 0.0 16 0.35526344283950884 0.0 0.0 0.0 0.0 17 0.38309114927344784 0.0 0.0 0.0 0.0 18 0.41254304090781124 0.0 0.0 0.0 0.0 19 0.4334950299932867 0.0 0.0 0.0 0.0 20 0.4574788314528878 0.0 0.0 0.0 0.0 21 0.4789722156051714 0.0 0.0 0.0 0.0 22 0.4983000194902224 0.0 0.0 0.0 0.0 23 0.5201182406825909 0.0 0.0 0.0 0.0 24 0.5409619507547048 0.0 0.0 0.0 0.0 25 0.5645126361608593 0.0 0.0 0.0 0.0 26 0.5903371808476081 0.0 0.0 0.0 0.0 27 0.6162700045477185 0.0 0.0 0.0 0.0 28 0.6428525023279988 0.0 0.0 0.0 0.0 29 0.6693808606015982 0.0 0.0 0.0 0.0 30 0.6956926608484744 0.0 0.0 0.0 0.0 31 0.7220586006020313 0.0 0.0 0.0 0.0 32 0.746746215648483 0.0 0.0 0.0 0.0 33 0.7740325270156139 0.0 0.0 0.0 0.0 34 0.8019143729562336 0.0 0.0 0.0 0.0 35 0.8244905472421336 0.0 0.0 0.0 0.0 36 0.8432769560603763 0.0 0.0 0.0 0.0 37 0.8600602031314291 0.0 0.0 0.0 0.0 38 0.8734868007882712 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCCCGCT 40 3.6379788E-12 166.45627 44 CGAGTTA 25 1.6732574E-6 152.18857 44 GCACGTA 20 1.311124E-4 142.6768 44 AGCGTAC 20 4.762258E-6 123.34649 43 CGACGAA 20 4.762258E-6 123.34649 43 CGAATGG 145 0.0 93.5732 43 CGCCCGC 55 1.4551915E-11 89.706535 43 CTATCAT 3000 0.0 86.87431 44 AACTCCG 55 8.0788595E-7 86.47079 44 CCGACGA 20 4.2178202E-5 79.50688 42 ATAAGTA 160 0.0 77.283264 44 CCAGTAC 50 5.2386044E-5 76.094284 44 TAACGAG 25 0.0017835827 74.00789 43 AACGACA 100 0.0 74.00789 43 AATCGGG 25 0.0017835827 74.00789 43 CATGACC 575 0.0 72.78584 44 AATGCGA 50 3.6379788E-12 71.55618 42 GAACGAC 75 0.0 68.90596 42 TCCGGGC 350 0.0 68.72162 43 AGGGCGG 85 1.3645877E-7 67.14202 44 >>END_MODULE