ERR841017.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR841017.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21164445
Sequences flagged as poor quality	0
Sequence length	24-50
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC	112038	0.5293689487250907	No Hit
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA	73186	0.34579692498433107	No Hit
CGGCAAGTTTGAATTTCGTGGAGGCTCGGG	45788	0.21634396744162204	No Hit
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT	43020	0.20326542935569536	No Hit
ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAA	32382	0.15300188594598157	No Hit
ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT	27236	0.1286875228714951	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCTTAGC	18260	75.92856	43
CTATCAT	7805	64.882126	44
TCGTGCG	4175	56.290184	43
ACCTTAG	18565	52.625084	42
CCCTATC	7100	49.20109	42
AACCTTA	26740	48.60811	41
CAACCTT	28215	40.431744	40
CGTGCGC	2935	40.227913	44
CCGCTCT	8520	39.733067	44
ACAACCT	32005	38.953148	39
GACAACC	32180	38.79521	38
CCTATCA	8165	38.629543	43
GACGCTA	7360	38.17213	31
CACCTTA	31835	37.80376	25
ACCTTAC	32485	37.25756	26
CTCGTGC	5030	37.239605	42
CCGCGGC	12120	37.204964	2
CGCGGCC	12305	36.72766	3
CTACCAG	33525	36.501602	32
AGACAAC	34190	36.297817	37