##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841006.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000587 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.73895605819846 39.0 37.0 39.0 32.0 39.0 2 37.500441310237726 39.0 37.0 39.0 35.0 39.0 3 37.876943308569466 39.0 38.0 39.0 35.0 39.0 4 38.16766139569018 39.0 37.0 40.0 35.0 41.0 5 38.92681224030373 40.0 38.0 41.0 35.0 41.0 6 38.87290115175598 40.0 38.0 41.0 35.0 41.0 7 38.941857032480485 40.0 38.0 41.0 35.0 41.0 8 38.854500851999966 40.0 38.0 41.0 35.0 41.0 9 38.897171590069156 40.0 38.0 41.0 35.0 41.0 10 38.87211576701119 40.0 38.0 41.0 35.0 41.0 11 38.7550644442928 40.0 38.0 41.0 35.0 41.0 12 38.687494610165956 40.0 38.0 41.0 35.0 41.0 13 38.629337144774006 40.0 38.0 41.0 35.0 41.0 14 38.620859638847996 40.0 38.0 41.0 35.0 41.0 15 38.63913370712848 40.0 38.0 41.0 35.0 41.0 16 38.58162889595952 40.0 38.0 41.0 35.0 41.0 17 38.55922893315406 40.0 38.0 41.0 35.0 41.0 18 38.46045492823928 40.0 37.0 41.0 35.0 41.0 19 38.34413574807897 40.0 37.0 41.0 34.0 41.0 20 38.23079263118137 40.0 36.0 41.0 34.0 41.0 21 38.09418467839844 40.0 36.0 41.0 34.0 41.0 22 37.99244985798334 40.0 36.0 41.0 34.0 41.0 23 37.89877160526693 39.0 35.0 41.0 34.0 41.0 24 37.76605483145348 39.0 35.0 41.0 33.0 41.0 25 37.638618513997145 39.0 35.0 41.0 33.0 41.0 26 37.50836677957404 39.0 35.0 41.0 33.0 41.0 27 37.324287022680636 38.0 35.0 40.0 33.0 41.0 28 37.14972235746585 38.0 35.0 40.0 33.0 41.0 29 37.093219275904296 38.0 35.0 40.0 33.0 41.0 30 37.072083659473606 38.0 35.0 40.0 33.0 41.0 31 36.95100786023821 38.0 35.0 40.0 33.0 41.0 32 36.89950276027194 38.0 35.0 40.0 32.0 41.0 33 36.75869803464113 38.0 35.0 40.0 32.0 41.0 34 36.64975465595176 38.0 35.0 40.0 32.0 41.0 35 36.59202914100759 37.0 35.0 40.0 32.0 41.0 36 36.54087621149662 37.0 35.0 40.0 32.0 41.0 37 36.43716828974108 37.0 34.0 40.0 31.0 41.0 38 36.30439101191874 37.0 34.0 40.0 31.0 41.0 39 36.21092448234471 36.0 34.0 40.0 31.0 41.0 40 35.93340717219616 36.0 34.0 40.0 31.0 41.0 41 35.80887206888592 36.0 34.0 39.0 31.0 41.0 42 35.670594962851766 36.0 34.0 39.0 30.0 41.0 43 35.57401065698263 36.0 34.0 39.0 30.0 41.0 44 35.31232812762575 35.0 34.0 39.0 29.0 41.0 45 35.09321244043077 35.0 33.0 39.0 29.0 41.0 46 34.771882360316944 35.0 33.0 39.0 28.0 41.0 47 34.81428685843502 35.0 33.0 38.0 29.0 40.0 48 35.57675259950603 36.0 34.0 39.0 31.0 40.0 49 36.3451782617641 37.0 35.0 39.0 32.0 41.0 50 36.23364933771159 37.0 35.0 39.0 32.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 14.0 21 50.0 22 151.0 23 296.0 24 604.0 25 1285.0 26 2187.0 27 4307.0 28 8738.0 29 17203.0 30 32543.0 31 61576.0 32 112987.0 33 200615.0 34 319609.0 35 290067.0 36 451590.0 37 687826.0 38 614529.0 39 574015.0 40 620395.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 53.287855007277685 19.29096905029187 27.421175942430448 2 29.251632322956606 23.120707036242433 30.209816709397895 17.417843931403066 3 31.62083464251621 19.643992244138172 22.296627969845424 26.438545143500193 4 20.77412639695125 27.136767679343055 27.19735878759792 24.891747136107774 5 20.324692351397434 30.289155066493993 25.137086132610037 24.249066449498535 6 22.87254345424809 37.13635024060219 22.43233305512416 17.55877325002556 7 28.857590148645684 33.383775930882145 19.620420703261797 18.138213217210374 8 23.73549181657592 30.309802036551137 25.202126587923225 20.752579558949723 9 23.29878090390235 31.437661523171474 26.57762473357035 18.68593283935582 10 27.377957284768463 27.550157014458126 26.160760908336698 18.91112479243671 11 24.073817167330695 29.179942843387735 25.506356942118746 21.239883047162827 12 22.21376512996718 29.463651209185056 27.870285035671017 20.452298625176756 13 20.997968548115566 30.272432520527616 27.25330057814016 21.476298353216666 14 16.741768145524645 34.933198553112334 25.92517048123188 22.399862820131144 15 17.87142736803374 37.634252173493536 25.030676748187204 19.463643710285517 16 20.118372628816722 39.61013721236409 21.383836921931707 18.887653236887488 17 20.03748449914975 40.711225627639145 18.707354695698406 20.5439351775127 18 21.45402662159328 32.09653983277954 22.677872022280727 23.77156152334645 19 22.21416507127579 29.364865705957648 25.785141030553767 22.63582819221279 20 22.744212286846903 29.481523586413694 25.27291619954772 22.501347927191684 21 22.484300428912057 31.73429299250335 23.84595060674846 21.93545597183613 22 22.590884787657412 33.59784451631723 22.58853513246931 21.222735563556046 23 23.898117951190663 30.646602611066825 24.257365231652255 21.197914206090257 24 22.809227745828302 30.807179046474932 24.38554642106271 21.998046786634063 25 21.127069190899054 31.263711051817662 26.05890154780028 21.55031820948301 26 22.60848855992088 33.98823311920331 24.600741289245246 18.802537031630564 27 23.53573999668985 31.53531658152671 22.54320205432508 22.385741367458362 28 23.172205808499452 31.49512126712691 23.20459616026174 22.1280767641119 29 23.37275885789023 33.581632222886 22.76605545621772 20.279553463006053 30 23.810192436338323 32.06918905947738 24.26181106179896 19.85880744238533 31 21.94303181065837 32.615023354856255 24.42912462063261 21.01282021385277 32 21.999900721039854 32.527457497515385 25.37121353742553 20.101428244019235 33 22.394810887973613 30.572616008639642 25.22357471865899 21.808998384727754 34 20.00922087623565 33.406289421662564 25.011908732121462 21.57258096998033 35 21.900973937675676 31.321171041597268 24.713516304411066 22.064338716315994 36 21.725111754437666 32.009082663524616 24.849574178584096 21.416231403453626 37 20.5550242123275 32.89520158186291 23.358028215011505 23.19174599079808 38 22.303838026710125 31.90172220917867 24.21561451240902 21.578825251702185 39 23.002169974074842 33.7832939239058 23.758881020593904 19.455655081425455 40 20.295018543942547 32.22176365387261 25.486367885990553 21.996849916194293 41 20.94215298877313 34.90372081520796 23.03434670727999 21.119779488738917 42 21.968015847465846 35.37030310229523 21.970053018082613 20.69162803215631 43 20.421982275626497 30.839658787905783 25.070343479970923 23.668015456496796 44 20.95475150534306 32.21584886782502 23.686979383224987 23.14242024360694 45 21.477748755918828 30.928829287556397 26.094181928538507 21.49924002798627 46 20.710159713089237 33.345468431409145 26.156420226809967 19.787951628691648 47 23.04193757545756 31.869311128397776 26.002387377063286 19.08636391908138 48 22.813400974746617 32.70053202453325 22.32104334335909 22.16502365736104 49 19.056822451584818 34.92708827335404 22.45746319461159 23.558626080449553 50 19.39850976325666 34.201256430035734 26.294543058231078 20.105690748476533 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 67348.0 1 56324.5 2 43751.5 3 39106.5 4 33844.0 5 36051.0 6 38384.5 7 40413.0 8 53445.5 9 64578.5 10 62983.5 11 48832.5 12 34353.0 13 26676.0 14 21869.5 15 19389.5 16 17304.5 17 16530.0 18 17551.5 19 19472.5 20 21601.5 21 25300.5 22 28674.5 23 32438.0 24 37743.0 25 42174.5 26 46357.0 27 52365.0 28 60546.5 29 70015.5 30 80206.0 31 94332.0 32 117245.0 33 142392.5 34 167768.0 35 185072.0 36 197538.0 37 211118.5 38 217774.5 39 230275.0 40 246648.5 41 262616.0 42 284610.0 43 301012.0 44 306751.0 45 306557.0 46 296795.0 47 280080.0 48 279881.0 49 305036.5 50 342800.5 51 360763.0 52 336635.0 53 295872.0 54 258484.5 55 237504.0 56 223165.0 57 202933.0 58 172950.0 59 144355.0 60 129617.0 61 111750.0 62 91885.0 63 72748.5 64 56367.0 65 44146.0 66 30567.0 67 19895.0 68 14247.5 69 10392.0 70 7787.5 71 5947.5 72 4650.5 73 3503.5 74 2355.0 75 1436.5 76 1031.0 77 612.5 78 338.5 79 288.0 80 175.0 81 83.0 82 45.5 83 22.5 84 12.5 85 9.0 86 11.0 87 10.0 88 8.0 89 7.5 90 6.5 91 5.5 92 4.5 93 4.0 94 6.0 95 8.5 96 9.0 97 9.0 98 4.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 21133.0 25 19866.0 26 20192.0 27 24650.0 28 24542.0 29 23003.0 30 50650.0 31 29243.0 32 32523.0 33 30627.0 34 28747.0 35 27324.0 36 24282.0 37 23455.0 38 23072.0 39 35468.0 40 39813.0 41 36771.0 42 50295.0 43 84698.0 44 200117.0 45 342832.0 46 459938.0 47 421307.0 48 667188.0 49 547152.0 50 711699.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.389488263477192 #Duplication Level Percentage of deduplicated Percentage of total 1 72.58168246995321 8.992499031049135 2 11.985670305242076 2.969926431534076 3 4.032413553723129 1.4987862119201716 4 1.834485306948173 0.9091333671982298 5 1.0524652835387072 0.6519753139060005 6 0.7083867236751306 0.5265929399385655 7 0.5183058114027062 0.4495080637086095 8 0.37237014006498914 0.3690780384003633 9 0.29751173141142107 0.3317416294111722 >10 3.0995349066604563 9.08395276520109 >50 1.6194217727079412 14.813852479069936 >100 1.790537790059342 36.94646161137741 >500 0.06360164680419574 5.359995655561876 >1k 0.037858123097735556 9.794663730923284 >5k 0.0039372448021644975 3.592454874323307 >10k+ 0.0018171899086913067 3.709377856476781 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGGCAAGTTTGAATTTCGTGGAGGCTCGGG 24149 0.6036364163558998 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 22620 0.5654170250515737 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAA 15289 0.3821689167114726 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA 14326 0.35809744919933 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAA 12103 0.3025306036339167 No Hit CACTTAGGAGATTTCAACTTAACTTGACCGCTCTGACCAAAAAAAAAAAA 10368 0.2591619679811987 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 9486 0.23711520334390926 No Hit CAGAGTGTTGCTTAACACAAAGCACCCAACTTACACTTAGGAGATTTCAA 9233 0.23079113140146681 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAG 8672 0.2167681892682249 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT 8665 0.2165932149457067 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 7883 0.19704608348724825 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATG 7421 0.185497778201049 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAAT 7372 0.1842729579434218 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGGTTGTGAGGG 6566 0.1641259145220439 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCC 6496 0.1623761712968622 No Hit AACACAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCG 6406 0.16012650143591428 No Hit CACTTAGGAGATTTCAACTTAACTTGACCGCTCTGACCAAAAAAAAAA 6394 0.15982654545445457 No Hit CAGAGTGTTGCTTAACACAAAGCACCCAACTTACACTTAGGAGATTTC 5630 0.14072934796818568 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC 5515 0.13785476981253 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGGTTGTGAGGGTTCCTGCTT 4988 0.12468170296009061 No Hit ATGCCAAAAAAAAAAAAAAAAAAAAAAAAAAA 4972 0.12428176165147765 No Hit CGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAATGG 4735 0.11835763101764817 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAA 4727 0.11815766036334169 No Hit TTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4685 0.11710781442823266 No Hit ATGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4578 0.11443320692688348 No Hit ATGCCAAAAAAAAAAAAAAAAAAAAAAAAAA 4569 0.1142082399407887 No Hit AACACAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGAC 4483 0.11205855540699403 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4450 0.1112336764579798 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGA 4410 0.11023382318644738 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAAG 4349 0.10870904694736047 No Hit CACTTAGGAGATTTCAACTTAACTTGACCGCTCTGACCAAAAAAAA 4315 0.10785917166655794 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.030320550459220108 0.0 0.0 0.0 0.0 2 0.04814293502428518 0.0 0.0 0.0 0.0 3 0.06674020587478788 0.0 0.0 0.0 0.0 4 0.0961108957260522 0.0 0.0 0.0 0.0 5 0.13200562817406544 0.0 0.0 0.0 0.0 6 0.30218065498888036 0.0 0.0 0.0 0.0 7 0.5056008030821477 0.0 0.0 0.0 0.0 8 0.570366298745659 0.0 0.0 0.0 0.0 9 0.6358066953674548 0.0 0.0 0.0 0.0 10 0.6769756538228014 0.0 0.0 0.0 0.0 11 0.7113206136999395 0.0 0.0 0.0 0.0 12 0.7479902324333904 0.0 0.0 0.0 0.0 13 0.7816852876840323 0.0 0.0 0.0 0.0 14 0.8212044882413506 0.0 0.0 0.0 0.0 15 0.8627733880053102 0.0 0.0 0.0 0.0 16 0.9042423024421167 0.0 0.0 0.0 0.0 17 0.9482858390531189 0.0 0.0 0.0 0.0 18 0.9930792656177706 0.0 0.0 0.0 0.0 19 1.0378726921824222 0.0 0.0 0.0 0.0 20 1.0736674393032823 0.0 0.0 0.0 0.0 21 1.10476287604794 0.0 0.0 0.0 0.0 22 1.1331837052912486 0.0 0.0 0.0 0.0 23 1.1617795088570753 0.0 0.0 0.0 0.0 24 1.189100499501698 0.0 0.0 0.0 0.0 25 1.2170713947728171 0.0 0.0 0.0 0.0 26 1.2483168095082047 0.0 0.0 0.0 0.0 27 1.273813067932281 0.0 0.0 0.0 0.0 28 1.3005591429457728 0.0 0.0 0.0 0.0 29 1.3326794292937512 0.0 0.0 0.0 0.0 30 1.3647247266463647 0.0 0.0 0.0 0.0 31 1.3937954605161693 0.0 0.0 0.0 0.0 32 1.4228162017223973 0.0 0.0 0.0 0.0 33 1.4526118292140628 0.0 0.0 0.0 0.0 34 1.4844071632487932 0.0 0.0 2.4996331788310065E-5 0.0 35 1.5110782492669201 0.0 0.0 2.4996331788310065E-5 0.0 36 1.5334499662174577 0.0 0.0 2.4996331788310065E-5 0.0 37 1.553322049989164 0.0 0.0 2.4996331788310065E-5 0.0 38 1.5686697977071864 0.0 0.0 2.4996331788310065E-5 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTCGCGT 15 2.2177817E-5 222.8328 44 CTATCAT 2035 0.0 120.45016 44 ACATCGC 130 0.0 94.27541 44 CCTTAGC 3845 0.0 88.0157 43 GTATCGT 105 2.3646862E-11 84.88869 44 GAGCGTA 20 3.5896715E-5 82.13947 42 CGTGCGC 535 0.0 81.21943 44 CTTCGCG 50 5.996844E-8 75.624664 43 TTTAACG 145 5.456968E-12 69.15501 44 CGGCTAC 55 1.1605334E-7 68.749695 43 CAATGAA 3380 0.0 67.495384 43 ACACGCG 15 0.0026201745 67.17399 41 ATACTCG 100 3.417881E-9 66.84984 44 CTTTCGT 100 1.4080979E-7 66.84984 44 TCGGATC 120 6.673872E-9 64.9929 44 CCTATCA 2170 0.0 63.891808 43 ACCTTAG 3785 0.0 63.80187 42 ACGGCGA 30 0.003373944 63.020554 43 GGCCACG 130 0.0 63.02055 43 TCGTGCG 1215 0.0 59.649082 43 >>END_MODULE