##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840989.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 639079 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.156130932169575 39.0 35.0 39.0 30.0 39.0 2 37.04796120667398 39.0 37.0 39.0 33.0 39.0 3 37.294843047573146 39.0 37.0 39.0 33.0 39.0 4 37.74984156888272 39.0 37.0 39.0 34.0 41.0 5 38.54991636401759 40.0 37.0 41.0 35.0 41.0 6 38.520503724891604 40.0 37.0 41.0 35.0 41.0 7 38.48855775264091 40.0 37.0 41.0 35.0 41.0 8 38.48637648866572 40.0 37.0 41.0 35.0 41.0 9 38.486977353347555 40.0 37.0 41.0 35.0 41.0 10 38.3900159448206 40.0 37.0 41.0 34.0 41.0 11 38.28838844649879 40.0 36.0 41.0 34.0 41.0 12 38.12991821042469 40.0 36.0 41.0 34.0 41.0 13 37.96803055647268 40.0 35.0 41.0 34.0 41.0 14 37.93132930357593 39.0 35.0 41.0 34.0 41.0 15 37.88875240776179 39.0 35.0 41.0 34.0 41.0 16 37.80355010882849 39.0 35.0 41.0 34.0 41.0 17 37.76320141954281 39.0 35.0 41.0 34.0 41.0 18 37.74716897284999 39.0 35.0 41.0 34.0 41.0 19 37.695929611206125 39.0 35.0 41.0 34.0 41.0 20 37.557373970980116 39.0 35.0 41.0 33.0 41.0 21 37.404586913355 38.0 35.0 40.0 33.0 41.0 22 37.25732342949776 38.0 35.0 40.0 33.0 41.0 23 37.07108197891028 38.0 35.0 40.0 33.0 41.0 24 36.86523105907094 38.0 35.0 40.0 33.0 41.0 25 36.67492700586314 37.0 35.0 40.0 33.0 41.0 26 36.4256256963849 37.0 35.0 40.0 32.0 41.0 27 36.229834337084824 37.0 35.0 40.0 32.0 41.0 28 36.1399409628343 36.0 35.0 39.0 32.0 41.0 29 35.93603443786212 36.0 34.0 39.0 31.0 41.0 30 35.827853705928305 36.0 34.0 39.0 31.0 41.0 31 35.73511602853592 36.0 34.0 39.0 31.0 41.0 32 35.58443112173813 35.0 34.0 39.0 31.0 41.0 33 35.50221135920845 35.0 34.0 39.0 31.0 41.0 34 35.37037532649238 35.0 34.0 38.0 31.0 41.0 35 35.24489667091482 35.0 34.0 38.0 31.0 40.0 36 35.15517892777287 35.0 34.0 38.0 31.0 40.0 37 35.12444890888281 35.0 34.0 38.0 31.0 40.0 38 34.993944770602305 35.0 34.0 37.0 31.0 40.0 39 34.8788358889879 35.0 34.0 37.0 30.0 40.0 40 34.65322414076168 35.0 33.0 37.0 30.0 40.0 41 34.52354521230109 35.0 33.0 36.0 30.0 40.0 42 34.383409992012595 35.0 33.0 36.0 30.0 39.0 43 34.26110855195812 35.0 33.0 36.0 29.0 39.0 44 33.99969547680299 35.0 33.0 36.0 29.0 39.0 45 33.85110818973733 35.0 32.0 36.0 29.0 39.0 46 33.5507521317544 35.0 32.0 36.0 28.0 39.0 47 33.41695628025074 35.0 32.0 35.0 28.0 38.0 48 34.06996039504688 35.0 33.0 36.0 30.0 39.0 49 34.626198157868856 35.0 34.0 36.0 31.0 39.0 50 34.370020215987914 35.0 33.0 36.0 30.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 3.0 21 6.0 22 23.0 23 61.0 24 151.0 25 306.0 26 565.0 27 1204.0 28 2374.0 29 4708.0 30 8422.0 31 14799.0 32 26358.0 33 45205.0 34 73822.0 35 66551.0 36 98363.0 37 112359.0 38 86624.0 39 61940.0 40 35234.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 45.78964415979871 18.977622484857115 35.23273335534417 2 23.301501066378336 19.84934569904503 34.37634470855716 22.472808526019474 3 20.309069770716924 21.490457361296492 30.82154162474436 27.378931243242228 4 17.62489457484912 23.26738947767021 35.55554164665089 23.552174300829787 5 16.91778324745454 28.664218351721775 32.091963591355686 22.326034809468002 6 19.57520118795955 28.28992972699776 28.724148344727336 23.410720740315362 7 24.799437941162203 26.406594489883094 23.943518719907868 24.85044884904683 8 24.909752941342152 26.467306858776457 26.474504716944224 22.148435482937163 9 24.152100131595624 25.88115084363592 26.03136701409372 23.935382010674736 10 24.955600168367294 22.97931867578187 28.054121634414525 24.010959521436316 11 27.119182448492285 24.580059742222794 25.743296212205376 22.55746159707955 12 25.18812228222176 24.056650273283896 27.633203406777568 23.122024037716777 13 23.68752532941937 23.84071452825081 27.753376343143803 24.718383799186018 14 20.843432502085033 26.329608702523476 25.394825991778795 27.432132803612696 15 21.652252694893743 31.0014880789386 25.031490629483994 22.314768596683663 16 22.555583894948825 32.69110704623372 23.141270484556685 21.612038574260772 17 21.156382857205447 33.3828838062274 21.840492333498677 23.62024100306848 18 20.75189452321231 28.600689429632332 22.495810377120826 28.151605670034535 19 23.717725038688485 25.292647700831978 23.23672034286841 27.752906917611124 20 21.65491277291227 26.052491163064346 26.194414149111456 26.098181914911926 21 23.56985599589409 29.318128118745886 23.401332229661747 23.71068365569828 22 26.012120567253817 27.51584702360741 22.759940476842456 23.71209193229632 23 25.133825395608365 25.79790604917389 26.11555065962111 22.952717895596635 24 25.760977907269677 26.3031643975158 24.72965001197035 23.206207683244166 25 25.338527525282334 27.32113485224098 24.571046314878213 22.769291307598476 26 25.442476824152017 31.115467946879004 23.36762624477563 20.07442898419335 27 26.639261136690674 28.307389112210952 23.215007242661915 21.838342508436465 28 27.06815376732525 26.338084450216392 23.70187520342364 22.89188657903472 29 24.195853134561553 28.29031313065556 24.405637653798582 23.10819608098431 30 25.620006958257026 30.014211911748294 24.97800928205229 19.387771847942393 31 23.958821163975635 29.2658669415894 24.34224570612503 22.433066188309937 32 22.333980187248358 28.50323121050673 25.9024112689405 23.26037733330441 33 25.072157046007366 25.494424954150645 28.49854509206012 20.934872907781866 34 24.8301900854724 28.31514687498941 24.617271319825328 22.237391719712857 35 22.04006913059575 27.547825849588065 26.179886272322 24.232218747494187 36 23.527138838609517 27.949758029338728 25.96006883026333 22.563034301788417 37 23.041919232085863 31.289181497861335 23.056960777872675 22.611938492180126 38 25.57390737116765 28.06244835833877 22.72511415525114 23.638530115242443 39 22.81987405837011 32.1475026128424 22.632554703378926 22.400068625408558 40 21.38876286275666 30.396796955130185 25.454179546341233 22.760260635771925 41 22.022915603942455 31.128693375378568 24.45288282150157 22.395508199177407 42 20.99624429567472 33.909340218490755 23.69285081938542 21.4015646664491 43 23.378045392062237 28.07445672837881 24.90823608551958 23.639261794039367 44 23.29303538634279 29.240765754404848 24.010626551807242 23.455572307445124 45 23.0523901881142 27.535257902938337 27.423643084106093 21.98870882484137 46 22.31994671438338 30.33499154772294 25.60237587023282 21.742685867660864 47 22.92866777751329 30.978867465418286 24.796477029278744 21.29598772778968 48 24.408119015390785 28.313154860380006 23.615393292224397 23.663332832004812 49 18.977603169177314 28.839607224300774 24.602799252658542 27.57999035386337 50 22.569760188782755 29.694205000638796 25.494690484958255 22.241344325620194 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 15840.0 1 13517.5 2 10772.5 3 9927.5 4 8933.0 5 6365.5 6 3362.0 7 2365.0 8 2229.5 9 2003.5 10 1797.5 11 1660.5 12 1653.0 13 1626.5 14 1573.0 15 1446.0 16 1317.0 17 1412.0 18 1628.0 19 1809.0 20 1904.0 21 2146.5 22 2512.0 23 2920.0 24 3699.5 25 4943.5 26 5845.0 27 6062.5 28 6405.5 29 7695.5 30 9398.0 31 10422.0 32 12441.0 33 16021.5 34 18857.5 35 19717.0 36 20783.5 37 22515.5 38 23473.0 39 26030.0 40 29377.0 41 33529.5 42 37927.5 43 40085.5 44 40317.0 45 39024.5 46 41784.5 47 45680.0 48 47637.0 49 53706.5 50 63005.5 51 67763.0 52 65051.5 53 59572.0 54 56805.0 55 54433.5 56 50058.0 57 48350.5 58 46758.5 59 39165.0 60 30116.5 61 24407.0 62 20614.5 63 17005.0 64 12537.5 65 9199.5 66 6457.0 67 4245.5 68 3277.5 69 2624.5 70 2139.0 71 1609.0 72 1034.0 73 749.0 74 671.5 75 636.5 76 603.0 77 452.0 78 297.5 79 172.5 80 65.5 81 36.0 82 27.5 83 23.0 84 17.5 85 15.0 86 11.5 87 8.0 88 6.0 89 4.0 90 2.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 3754.0 25 4388.0 26 4786.0 27 5525.0 28 6186.0 29 5092.0 30 5057.0 31 4980.0 32 4428.0 33 4517.0 34 4229.0 35 3835.0 36 3904.0 37 3523.0 38 3658.0 39 4756.0 40 5795.0 41 6043.0 42 7567.0 43 11793.0 44 26370.0 45 53986.0 46 76817.0 47 58938.0 48 105595.0 49 80494.0 50 133063.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.082609505241136 #Duplication Level Percentage of deduplicated Percentage of total 1 67.99297769975222 9.575185540441792 2 11.227902532250358 3.1623633384917986 3 4.418937988199869 1.8669053434708385 4 2.395582173135257 1.3494419312792316 5 1.4544606051178346 1.0241300371315596 6 1.0722341359348437 0.9059912780736028 7 0.7977866420738009 0.7864442424176041 8 0.642229358103979 0.7235412210384006 9 0.5377837531528128 0.6816058734522649 >10 5.762286247624973 19.399166613204315 >50 2.24224713607929 22.478285157234083 >100 1.4066822964699608 32.045490463620304 >500 0.04111156790631007 3.820028509777351 >1k 0.007777864198491094 2.1814204503668564 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 4779 0.7477948735602328 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA 3009 0.4708338092786651 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT 1797 0.2811858940756933 No Hit TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTTTCCG 1202 0.1880831634273697 No Hit CTTTTTCGCAACGGGTTTGCCGCCAGAACACAGGTGTCGTGAAAACTAC 1064 0.16648958892406104 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 1063 0.1663331137465008 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1027 0.16070000735433335 No Hit TCTCTCGGCCTTAGCGCCATTTTTTTGGAAACCTCTGCGCCATGAGAGC 889 0.13910643285102467 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAA 881 0.13785463143054302 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAA 871 0.13628987965494094 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAA 849 0.13284742574861638 No Hit CTCTTTTTCCGGCTGGAACCATGGAGGG 811 0.12690136900132848 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAAT 802 0.1254930924032866 No Hit CTCTTCCTGCTCTCCATCATGGCGCAGGATCAAGGTGAAAAGGAGAACCC 796 0.12455424133792536 No Hit ACTTTTTTTTTTTTTTTTTTTTTTTTTTT 786 0.12298948956232328 No Hit AAAAAAAAAAAAAAAAAAAAAAAAA 736 0.11516573068431289 No Hit TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTTTC 726 0.11360097890871082 No Hit CTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTT 722 0.11297507819846997 No Hit CTCTTTTCCTCCTTGGCTGTCTGAAGATAGATCGCCATCATGAACGACA 716 0.11203622713310873 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAA 716 0.11203622713310873 No Hit ACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 715 0.11187975195554854 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 689 0.10781139733898314 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC 681 0.10655959591850148 No Hit TCTCATTGAACTCGCCTGCAGCTCTTGGGTTTTTTGTGGCTT 658 0.1029606668346167 No Hit CTCTCGGCCTTAGCGCCATTTTTTTGGAAACCTCTGCGCCATGAGAGCCA 656 0.10264771647949626 No Hit ACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 655 0.10249124130193607 No Hit CTTTTTCGCAACGGGTTTGCCGCCAGAACACAGGTGTCGTGAAAACT 643 0.10061353917121359 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0627465462016433 0.0 0.0 0.0 0.0 2 0.12205063849696203 0.0 0.0 0.0 0.0 3 0.15850935486849044 0.0 0.0 0.0 0.0 4 0.18777021307224928 0.0 0.0 0.0 0.0 5 0.22626310675206038 0.0 0.0 0.0 0.0 6 0.28024704301033204 0.0 0.0 0.0 0.0 7 0.3104467522794522 0.0 0.0 0.0 0.0 8 0.3459666175856193 0.0 0.0 0.0 0.0 9 0.3742886247240169 0.0 0.0 0.0 0.0 10 0.40605308576873905 0.0 0.0 0.0 0.0 11 0.43547041915005813 0.0 0.0 0.0 0.0 12 0.46175824898017304 0.0 0.0 0.0 0.0 13 0.48961083058589 0.0 0.0 0.0 0.0 14 0.5210623412754918 0.0 0.0 0.0 0.0 15 0.5518879512548527 0.0 0.0 0.0 0.0 16 0.5816182349912922 0.0 0.0 0.0 0.0 17 0.613852121568695 0.0 0.0 0.0 0.0 18 0.6465554336787783 0.0 0.0 0.0 0.0 19 0.6767551429478985 0.0 0.0 0.0 0.0 20 0.7093019798804217 0.0 0.0 0.0 0.0 21 0.7415358664578244 0.0 0.0 0.0 0.0 22 0.7714226253718242 0.0 0.0 0.0 0.0 23 0.7986493062673002 0.0 0.0 0.0 0.0 24 0.823998285032054 0.0 0.0 0.0 0.0 25 0.8527897177031322 0.0 0.0 0.0 0.0 26 0.8854930298132155 0.0 0.0 0.0 0.0 27 0.9105290582228488 0.0 0.0 0.0 0.0 28 0.9366604128754035 0.0 0.0 0.0 0.0 29 0.9720238030040105 0.0 0.0 0.0 0.0 30 1.0053530158243347 0.0 0.0 0.0 0.0 31 1.035865675448575 0.0 0.0 0.0 0.0 32 1.0638747322318525 0.0 0.0 0.0 0.0 33 1.0957956684541348 0.0 0.0 0.0 0.0 34 1.1256824273681345 0.0 0.0 0.0 0.0 35 1.1541609096840924 0.0 0.0 0.0 0.0 36 1.1782580870283643 0.0 0.0 0.0 0.0 37 1.194531505494626 0.0 0.0 0.0 0.0 38 1.208144845942364 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAT 10 0.0031918192 189.29195 44 CATATAC 15 4.243203E-5 189.29195 44 CAACGGT 20 5.631464E-7 189.29195 44 AACGGTG 20 5.631464E-7 189.29195 44 GATATAC 10 0.0031918192 189.29195 44 GCTAGTT 20 5.631464E-7 189.29195 44 ACGAACA 85 0.0 167.02231 44 ACCTGCC 45 1.0913936E-11 147.22708 44 AGAATCG 35 5.606853E-8 135.20856 44 AATCGCA 90 0.0 126.19464 44 GGGCGTA 30 2.5393092E-9 119.17063 43 GGCATCG 15 2.683298E-4 119.17063 43 TAACTAA 15 2.683298E-4 119.17063 43 CGCCAGT 30 2.5393092E-9 119.17063 43 GTTCGGC 50 0.0 119.17062 43 GAGTTAT 25 1.193348E-7 119.17062 43 TAACGGT 20 5.643409E-6 119.170616 43 AGACCGC 20 5.643409E-6 119.170616 43 GACGATT 20 5.643409E-6 119.170616 43 AGAGCCA 165 0.0 114.7224 44 >>END_MODULE