ERR840980.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR840980.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2961092
Sequences flagged as poor quality	0
Sequence length	24-50
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC	9000	0.3039419241279906	No Hit
ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT	8043	0.27162276619571424	No Hit
CCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGC	5410	0.18270286772582547	No Hit
AAGATAAAATTTGAAATCTGGTTAGGCTGGTGTTAGGGTTCTTTGTTTTT	4920	0.16615491852330153	No Hit
AAAGATAAAATTTGAAATCTGGTTAGGCTGGTGTTAGGGTTCTTTGTTTT	4794	0.16189973158550966	No Hit
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT	4741	0.16010985136564485	No Hit
TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4254	0.14366321613783023	No Hit
TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTTTCCG	3941	0.13309279144315678	No Hit
ACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3887	0.13126913989838884	No Hit
CTCTCGGCCTTAGCGCCATTTTTTTGGAAACCTCTGCGCCATGAGAGCC	3704	0.12508898744111968	No Hit
ATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGC	3652	0.12333287854615797	No Hit
ACTTTTTTTTTTTTTTTTTTTTTTTTTTT	3603	0.12167808362590557	No Hit
ACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3546	0.1197531181064283	No Hit
TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTTTCCGG	3501	0.11823340848578835	No Hit
CTCTTCCTGCTCTCCATCATGGCGCAGGATCAAGGTGAAAAGGAGAACC	3265	0.11026337580865439	No Hit
CAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCGCTCT	3235	0.10925023606156106	No Hit
CTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTT	3125	0.10553539032221897	No Hit
ACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3085	0.10418453732609456	No Hit
ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA	3050	0.10300254095448572	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGACGG	45	3.5342964E-9	113.68813	44
CGTTTGA	310	0.0	100.34268	43
TGCGAAT	30	4.8402217E-7	94.26131	43
GGACGCA	25	2.2198452E-5	90.49085	43
CTATCAT	1905	0.0	90.4134	44
CCGATTG	60	2.6077032E-8	85.266106	44
CCCGACT	60	2.6077032E-8	85.266106	44
CGATTGC	20	0.001037502	84.835175	43
ACGAATA	20	0.001037502	84.835175	43
CGTTATA	30	6.586379E-8	74.60985	42
GCGTTAA	35	0.0018747366	73.085236	44
CAGTCGA	55	2.9776857E-9	71.98136	43
CCCGAGC	1345	0.0	71.63621	44
AATCGCA	280	0.0	70.040016	44
AACGCAC	170	0.0	65.20349	44
CACGGTA	80	1.9138861E-7	63.949577	44
CGTCGAT	40	0.0031832757	63.949577	44
TCGCAAA	775	0.0	63.48955	43
CCCTATC	1825	0.0	62.549625	42
CTAATCG	230	0.0	61.63422	42