##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840980.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2961092 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 37.03289225731588 39.0 37.0 39.0 33.0 39.0 2 37.75246699528417 39.0 37.0 39.0 35.0 39.0 3 37.914815885490896 39.0 38.0 39.0 35.0 39.0 4 38.30474635708718 39.0 38.0 40.0 35.0 41.0 5 39.09542695735222 40.0 38.0 41.0 35.0 41.0 6 39.006514488573806 40.0 38.0 41.0 35.0 41.0 7 39.07359514665536 40.0 38.0 41.0 35.0 41.0 8 38.99864644529789 40.0 38.0 41.0 35.0 41.0 9 39.04886508085531 40.0 38.0 41.0 35.0 41.0 10 39.02596508315175 40.0 38.0 41.0 35.0 41.0 11 38.996750523117825 40.0 38.0 41.0 35.0 41.0 12 38.95798171755555 40.0 38.0 41.0 35.0 41.0 13 38.81067221146793 40.0 38.0 41.0 35.0 41.0 14 38.797966763612884 40.0 38.0 41.0 35.0 41.0 15 38.71895773586231 40.0 38.0 41.0 35.0 41.0 16 38.66356938588872 40.0 38.0 41.0 35.0 41.0 17 38.65569560148756 40.0 38.0 41.0 35.0 41.0 18 38.6194505270353 40.0 38.0 41.0 35.0 41.0 19 38.62820574301643 40.0 38.0 41.0 35.0 41.0 20 38.5893352857662 40.0 38.0 41.0 35.0 41.0 21 38.51148157504056 40.0 38.0 41.0 35.0 41.0 22 38.379995285523044 40.0 37.0 41.0 34.0 41.0 23 38.30873002257275 40.0 37.0 41.0 34.0 41.0 24 38.195296194782195 40.0 37.0 41.0 34.0 41.0 25 38.09981863924476 40.0 37.0 41.0 34.0 41.0 26 37.94303795093662 39.0 37.0 41.0 33.0 41.0 27 37.86848483290048 39.0 36.0 41.0 33.0 41.0 28 37.74376735412527 39.0 36.0 41.0 33.0 41.0 29 37.657333579794276 39.0 36.0 41.0 33.0 41.0 30 37.61603820435342 39.0 36.0 41.0 33.0 41.0 31 37.46536384803321 39.0 35.0 40.0 33.0 41.0 32 37.33130255983162 38.0 35.0 40.0 33.0 41.0 33 37.245733143766685 38.0 35.0 40.0 32.0 41.0 34 37.16512230829794 38.0 35.0 40.0 32.0 41.0 35 37.088748396044714 38.0 35.0 40.0 32.0 41.0 36 37.059093904382166 38.0 35.0 40.0 32.0 41.0 37 36.96551282323492 38.0 35.0 40.0 32.0 41.0 38 36.865568729137124 38.0 35.0 40.0 32.0 41.0 39 36.67474589494101 38.0 35.0 40.0 31.0 41.0 40 36.55494762167011 38.0 34.0 40.0 31.0 41.0 41 36.42188831745518 37.0 34.0 40.0 31.0 41.0 42 36.28732120559922 37.0 34.0 40.0 31.0 41.0 43 36.1562174209325 37.0 34.0 40.0 30.0 41.0 44 35.93043540136896 37.0 34.0 40.0 30.0 41.0 45 35.66938192880191 36.0 34.0 40.0 29.0 41.0 46 35.312175568911776 36.0 33.0 40.0 28.0 41.0 47 35.16959029114732 36.0 33.0 39.0 28.0 41.0 48 36.0060838296452 37.0 34.0 40.0 31.0 41.0 49 36.83238899194925 38.0 35.0 40.0 32.0 41.0 50 36.60395952789249 38.0 35.0 40.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 10.0 21 26.0 22 77.0 23 128.0 24 311.0 25 587.0 26 915.0 27 1743.0 28 3854.0 29 8031.0 30 16723.0 31 33759.0 32 62169.0 33 106800.0 34 166198.0 35 195618.0 36 329177.0 37 507805.0 38 509085.0 39 524288.0 40 493786.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 48.785988412383 17.017809645900904 34.1962019417161 2 23.213496912625477 22.305217129356333 33.61692240565305 20.86436355236514 3 22.402782487001417 20.532155029293246 30.526609777744156 26.53845270596118 4 21.167494964695457 22.022179655343365 35.66717954052086 21.143145839440315 5 19.63974776872856 23.874638140253662 33.5881154655107 22.897498625507076 6 19.59790509717361 28.530656933320547 30.78455515735411 21.08688281215173 7 26.547131936461277 26.011316095548537 25.062173009146626 22.379378958843564 8 24.40342954558656 25.612578062417512 27.88960964400971 22.094382747986216 9 23.188911388096013 25.481815492392673 28.896603009970644 22.43267010954067 10 22.77744156547652 23.434867947365365 29.332725899769407 24.454964587388705 11 24.45023660190227 24.17287271047303 29.00777821155168 22.369112476073017 12 23.92293113486511 25.237682584668086 28.83193092278119 22.00745535768561 13 23.97341926559526 24.060279113246057 28.579186327206312 23.387115293952366 14 20.208456880096936 26.000272872305217 28.879852432818705 24.911417814779142 15 21.312441491179605 28.80325906793845 27.479862158960277 22.40443728192167 16 21.559782674769984 31.925316741256264 24.4483454077077 22.066555176266053 17 21.577411306369406 31.49655600028638 24.698861095838968 22.227171597505244 18 21.95176644292038 26.76522715268556 25.254804646393964 26.02820175800009 19 21.488761578498742 26.335351957993876 26.38979133373769 25.78609512976969 20 22.313592417932306 25.67508878481317 27.7928547981623 24.218463999092226 21 24.190467570747547 26.626595863958297 26.519304364741114 22.66363220055304 22 24.32916640212462 27.446529861280904 25.034379208751368 23.189924527843107 23 24.650838271826743 26.716056103626634 26.189628691036955 22.443476933509665 24 25.230995862337274 27.70835894325472 25.959409569172454 21.101235625235553 25 24.395973017753406 27.513301824192016 26.342971982375506 21.74775317567907 26 25.90591518607089 28.24311275244657 25.704466158371137 20.146505903111407 27 25.615298242005025 28.562764106388265 25.269699229430774 20.552238422175936 28 25.14775379038598 27.403453604654132 24.88423681190009 22.5645557930598 29 24.018719450077064 29.225565968376095 25.039262340535828 21.71645224101101 30 25.80692882323317 28.740977001846566 25.497453975714844 19.954640199205418 31 24.568921340977855 28.994717417588863 25.32219737677643 21.114163864656852 32 23.118327435269983 28.610496199925727 26.289093660914975 21.982082703889315 33 22.507528276112247 28.010042938130674 28.15064692831339 21.331781857443694 34 23.541833087174656 28.62284275919934 26.512439154746648 21.322884998879353 35 21.95284651670988 27.63271927772569 27.881940213730545 22.53249399183388 36 22.87860688226302 29.26506402430926 26.070198049451783 21.78613104397594 37 22.249332096488537 31.84909517286419 24.9530509041682 20.94852182647907 38 24.542213132254613 29.26202666030565 24.413336337145523 21.782423870294213 39 22.531463536970538 30.66990087698567 24.399457079416212 22.39917850662759 40 21.673688750785413 30.21619213496729 25.346029798710205 22.76408931553709 41 21.541213845727963 30.815765042192144 25.25110965061777 22.391911461462122 42 22.4406399929474 30.461109249164213 25.13347119340156 21.964779564486822 43 23.235784674883476 29.62341382915873 25.180675777729807 21.960125718227992 44 22.07475518129701 28.3326602048943 25.43862495694389 24.153959656864796 45 22.323614893470946 28.535262309606086 27.413086547294846 21.728036249628122 46 23.033403259787708 29.80834061765303 25.14498923970695 22.01326688285231 47 21.94956035783276 30.10012308570269 26.891161101229176 21.059155455235373 48 22.5255023008385 28.437833823493225 25.956285014988733 23.08037886067954 49 20.60838468655124 28.64259206258801 25.566438433664256 25.182584817196492 50 20.239647313670332 29.398481217900528 28.067426680600093 22.294444787829043 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 37721.0 1 33236.0 2 37495.5 3 44822.0 4 39776.0 5 26598.5 6 13730.0 7 10647.0 8 10451.0 9 9733.0 10 9156.0 11 8614.5 12 8278.0 13 8051.5 14 8273.5 15 8880.5 16 9465.5 17 10430.0 18 11477.5 19 12714.5 20 14285.5 21 16051.5 22 18013.5 23 21742.0 24 25986.0 25 29717.0 26 34453.5 27 42666.5 28 51246.0 29 58310.0 30 65974.0 31 79006.0 32 98060.5 33 108223.5 34 115051.0 35 122923.5 36 125126.0 37 130144.5 38 138614.0 39 149699.0 40 159363.0 41 167474.5 42 175801.5 43 180430.5 44 183632.5 45 187416.5 46 202593.0 47 215074.0 48 221509.0 49 229245.0 50 241188.0 51 249879.0 52 246779.5 53 233317.0 54 217300.5 55 206883.0 56 198361.5 57 193486.5 58 185654.5 59 162725.5 60 130958.0 61 108248.0 62 92036.0 63 73977.0 64 55725.5 65 44416.5 66 34049.5 67 24497.0 68 18416.5 69 14003.0 70 10807.0 71 8028.0 72 5763.0 73 4170.0 74 2977.5 75 2028.5 76 1465.0 77 951.0 78 506.5 79 334.5 80 237.5 81 162.0 82 94.5 83 64.0 84 54.0 85 41.0 86 29.5 87 28.5 88 26.0 89 21.5 90 12.5 91 2.5 92 1.0 93 1.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 13376.0 25 15957.0 26 15084.0 27 18949.0 28 19650.0 29 18716.0 30 20029.0 31 20044.0 32 18513.0 33 16662.0 34 18293.0 35 17566.0 36 16571.0 37 15134.0 38 17074.0 39 19358.0 40 25001.0 41 23461.0 42 28372.0 43 45573.0 44 110677.0 45 235661.0 46 367940.0 47 258574.0 48 533154.0 49 356014.0 50 695689.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.625410406750962 #Duplication Level Percentage of deduplicated Percentage of total 1 75.91703230487514 11.862347866262448 2 10.612590380824603 3.3165216035824376 3 3.5442378216876853 1.6614051162899737 4 1.6582065914744866 1.0364063412387392 5 0.9167447551991106 0.7162256519111272 6 0.6089901831944924 0.5709432927657837 7 0.41221028435484725 0.4508668406849602 8 0.3259313712220063 0.4074249151823158 9 0.2740633198919876 0.38541166656740833 >10 2.812131961715579 10.333941744027825 >50 1.397362890579609 16.006732001426936 >100 1.441846122062273 37.10149564365684 >500 0.045450548448629585 5.030365529868077 >1k 0.03223443152385077 9.989007565753475 >5k 9.670329457155231E-4 1.130904220781672 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 9000 0.3039419241279906 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 8043 0.27162276619571424 No Hit CCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGC 5410 0.18270286772582547 No Hit AAGATAAAATTTGAAATCTGGTTAGGCTGGTGTTAGGGTTCTTTGTTTTT 4920 0.16615491852330153 No Hit AAAGATAAAATTTGAAATCTGGTTAGGCTGGTGTTAGGGTTCTTTGTTTT 4794 0.16189973158550966 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT 4741 0.16010985136564485 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4254 0.14366321613783023 No Hit TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTTTCCG 3941 0.13309279144315678 No Hit ACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3887 0.13126913989838884 No Hit CTCTCGGCCTTAGCGCCATTTTTTTGGAAACCTCTGCGCCATGAGAGCC 3704 0.12508898744111968 No Hit ATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGC 3652 0.12333287854615797 No Hit ACTTTTTTTTTTTTTTTTTTTTTTTTTTT 3603 0.12167808362590557 No Hit ACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3546 0.1197531181064283 No Hit TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTTTCCGG 3501 0.11823340848578835 No Hit CTCTTCCTGCTCTCCATCATGGCGCAGGATCAAGGTGAAAAGGAGAACC 3265 0.11026337580865439 No Hit CAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCGCTCT 3235 0.10925023606156106 No Hit CTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTT 3125 0.10553539032221897 No Hit ACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3085 0.10418453732609456 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA 3050 0.10300254095448572 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.06852201822841034 0.0 0.0 0.0 0.0 2 0.1254267006901508 0.0 0.0 0.0 0.0 3 0.15284901651147617 0.0 0.0 0.0 0.0 4 0.17763716899035897 0.0 0.0 0.0 0.0 5 0.19648156828629437 0.0 0.0 0.0 0.0 6 0.23531859192487095 0.0 0.0 0.0 0.0 7 0.2618290819738124 0.0 0.0 0.0 0.0 8 0.29256098763564253 0.0 0.0 0.0 0.0 9 0.3193078769589057 0.0 0.0 0.0 0.0 10 0.34186712199418323 0.0 0.0 0.0 0.0 11 0.3650004795528136 0.0 0.0 0.0 0.0 12 0.3903289732301462 0.0 0.0 0.0 0.0 13 0.41342855946387347 0.0 0.0 0.0 0.0 14 0.44014167746223354 0.0 0.0 0.0 0.0 15 0.46688856678549673 0.0 0.0 0.0 0.0 16 0.496438476075718 0.0 0.0 0.0 0.0 17 0.5251778735682647 0.0 0.0 0.0 0.0 18 0.5549304108079046 0.0 0.0 0.0 0.0 19 0.5828592965027767 0.0 0.0 0.0 0.0 20 0.6101127556995865 0.0 0.0 0.0 0.0 21 0.636657017073431 0.0 0.0 0.0 0.0 22 0.6610736849783796 0.0 0.0 0.0 0.0 23 0.6865034926304214 0.0 0.0 0.0 0.0 24 0.7123723275062038 0.0 0.0 0.0 0.0 25 0.7390516741796608 0.0 0.0 0.0 0.0 26 0.7684327268453665 0.0 0.0 0.0 0.0 27 0.7938963058223115 0.0 0.0 0.0 0.0 28 0.8231085018635017 0.0 0.0 0.0 0.0 29 0.8572850826654491 0.0 0.0 0.0 0.0 30 0.8890976707241788 0.0 0.0 0.0 0.0 31 0.9197282624112996 0.0 0.0 0.0 0.0 32 0.9518785637190604 0.0 0.0 0.0 0.0 33 0.9822727561318595 0.0 0.0 0.0 0.0 34 1.0105055837508594 0.0 0.0 0.0 0.0 35 1.0375564149982506 0.0 0.0 0.0 0.0 36 1.0596766328097877 0.0 0.0 0.0 0.0 37 1.0815266800221 0.0 0.0 0.0 0.0 38 1.0967237762284996 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGACGG 45 3.5342964E-9 113.68813 44 CGTTTGA 310 0.0 100.34268 43 TGCGAAT 30 4.8402217E-7 94.26131 43 GGACGCA 25 2.2198452E-5 90.49085 43 CTATCAT 1905 0.0 90.4134 44 CCGATTG 60 2.6077032E-8 85.266106 44 CCCGACT 60 2.6077032E-8 85.266106 44 CGATTGC 20 0.001037502 84.835175 43 ACGAATA 20 0.001037502 84.835175 43 CGTTATA 30 6.586379E-8 74.60985 42 GCGTTAA 35 0.0018747366 73.085236 44 CAGTCGA 55 2.9776857E-9 71.98136 43 CCCGAGC 1345 0.0 71.63621 44 AATCGCA 280 0.0 70.040016 44 AACGCAC 170 0.0 65.20349 44 CACGGTA 80 1.9138861E-7 63.949577 44 CGTCGAT 40 0.0031832757 63.949577 44 TCGCAAA 775 0.0 63.48955 43 CCCTATC 1825 0.0 62.549625 42 CTAATCG 230 0.0 61.63422 42 >>END_MODULE