##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840979.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2806270 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 37.33916551151528 39.0 37.0 39.0 34.0 39.0 2 37.8772897832354 39.0 38.0 39.0 35.0 39.0 3 38.00316327366932 39.0 38.0 39.0 35.0 39.0 4 38.359782558342566 39.0 38.0 39.0 35.0 41.0 5 39.24277100920439 40.0 39.0 41.0 36.0 41.0 6 39.16399277332545 40.0 38.0 41.0 35.0 41.0 7 39.21870383106401 40.0 38.0 41.0 36.0 41.0 8 39.16551329700991 40.0 38.0 41.0 36.0 41.0 9 39.19204068033368 40.0 38.0 41.0 36.0 41.0 10 39.15047839302704 40.0 39.0 41.0 35.0 41.0 11 39.12381844940081 40.0 38.0 41.0 35.0 41.0 12 39.054697516632395 40.0 38.0 41.0 35.0 41.0 13 38.92060742551501 40.0 38.0 41.0 35.0 41.0 14 38.901551525690685 40.0 38.0 41.0 35.0 41.0 15 38.84421349335595 40.0 38.0 41.0 35.0 41.0 16 38.72568035149861 40.0 38.0 41.0 35.0 41.0 17 38.698222195298385 40.0 38.0 41.0 35.0 41.0 18 38.71164214419853 40.0 38.0 41.0 35.0 41.0 19 38.67097250086414 40.0 38.0 41.0 35.0 41.0 20 38.583569293047354 40.0 38.0 41.0 35.0 41.0 21 38.473981833537046 40.0 38.0 41.0 35.0 41.0 22 38.39787440267686 40.0 37.0 41.0 34.0 41.0 23 38.323739697178105 40.0 37.0 41.0 34.0 41.0 24 38.165032587741024 40.0 37.0 41.0 34.0 41.0 25 38.04209928141431 39.0 37.0 41.0 34.0 41.0 26 37.876360007864584 39.0 36.0 41.0 33.0 41.0 27 37.706841385946 39.0 36.0 41.0 33.0 41.0 28 37.624267030151984 39.0 36.0 41.0 33.0 41.0 29 37.50149071312811 39.0 35.0 41.0 33.0 41.0 30 37.44664684677796 39.0 35.0 40.0 33.0 41.0 31 37.33154049826705 38.0 35.0 40.0 33.0 41.0 32 37.243949846424826 38.0 35.0 40.0 33.0 41.0 33 37.11328930975374 38.0 35.0 40.0 32.0 41.0 34 36.99487859546407 38.0 35.0 40.0 32.0 41.0 35 36.88245808111281 38.0 35.0 40.0 32.0 41.0 36 36.83353837800101 38.0 35.0 40.0 32.0 41.0 37 36.762854833486145 38.0 35.0 40.0 32.0 41.0 38 36.609743918209844 38.0 35.0 40.0 31.0 41.0 39 36.49461445630157 37.0 34.0 40.0 31.0 41.0 40 36.31618695335408 37.0 34.0 40.0 31.0 41.0 41 36.19177774847048 37.0 34.0 40.0 31.0 41.0 42 36.016184985641075 36.0 34.0 40.0 31.0 41.0 43 35.86273213356981 36.0 34.0 40.0 30.0 41.0 44 35.59609709030956 36.0 34.0 39.0 30.0 41.0 45 35.40052890591859 36.0 33.0 39.0 29.0 41.0 46 35.00115622034106 36.0 33.0 39.0 28.0 41.0 47 34.83766509536554 35.0 33.0 39.0 28.0 41.0 48 35.66756122996266 36.0 34.0 39.0 30.0 41.0 49 36.499327779476054 37.0 35.0 40.0 32.0 41.0 50 36.14704446940797 37.0 34.0 39.0 31.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 3.0 20 11.0 21 21.0 22 65.0 23 126.0 24 267.0 25 520.0 26 834.0 27 1741.0 28 3890.0 29 8122.0 30 16442.0 31 31816.0 32 57915.0 33 99508.0 34 159149.0 35 197029.0 36 331841.0 37 497243.0 38 482601.0 39 437955.0 40 479170.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 49.46452052012101 17.54342953457793 32.99204994530106 2 24.039347603758728 22.146942382593267 33.889468939196874 19.92424107445114 3 23.38385116186254 21.981348907981058 28.820854728874984 25.81394520128142 4 21.189051659320025 24.2567179922103 32.93977414860295 21.614456199866726 5 19.911412658083506 24.8999205350875 30.76770945062307 24.420957356205925 6 19.177484703895207 28.688971481717722 29.93553720775264 22.19800660663443 7 25.93481739105646 25.03978590798462 23.98379343398889 25.041603266970036 8 24.032897761085 24.817925573804374 27.853128886386557 23.296047778724073 9 23.959383808400474 26.107537763650683 28.75888635092133 21.174192077027513 10 25.13439547869592 23.72793779643441 26.077711695595934 25.059955029273734 11 24.614274463968187 24.39351879897515 27.63497453915696 23.3572321978997 12 24.535344068817327 24.723957423911454 27.349649178446832 23.39104932882438 13 22.838928542157383 25.179116763533088 26.37144679592484 25.61050789838469 14 20.682507385248034 23.76065025817188 26.52367733682076 29.033165019759327 15 21.35888563823153 29.891492978223766 25.80428825451578 22.945333129028924 16 21.463437231627747 31.429370659273697 25.764128184387104 21.34306392471145 17 21.474412654520055 31.961500497101134 22.55424460226564 24.009842246113166 18 22.94462043923072 26.210200729081663 24.811083751741634 26.034095079945978 19 23.35598499075285 25.300915450045792 24.86952431519419 26.47357524400717 20 22.666600148952167 25.22772220777046 26.05365841490662 26.052019228370753 21 22.78102249605348 29.010786560095784 26.211305398268873 21.996885545581858 22 25.396415883004842 27.486556888681417 24.073200369173314 23.043826859140427 23 24.747832532151218 26.90888617274888 25.18663564090412 23.156645654195785 24 24.868063301107878 27.262736657556115 25.764627067245844 22.10457297409016 25 22.923485018841927 27.955518443030925 25.767785246434645 23.353211291692507 26 26.39994296015205 29.43216543284386 25.151079976060547 19.016811630943543 27 24.32200920882541 29.820384004609128 23.571792158167433 22.285814628398025 28 24.836596052578688 27.677847738144397 23.444437541796546 24.04111866748037 29 23.16239061070033 30.115759246420463 25.566218512854704 21.155631630024498 30 24.060265924058076 29.613051875570495 26.272983640610896 20.053698559760527 31 24.290173047721147 30.211427154795427 25.02485651648308 20.473543281000346 32 22.774177071381377 28.73422718578113 25.475284454968232 23.016311287869257 33 22.191466519525044 27.703091681805226 29.160567917079522 20.944873881590205 34 22.841479516865935 29.595152608377457 26.402042294294453 21.161325580462155 35 21.57638195540486 27.055726408581265 25.692705591893105 25.675186044120768 36 22.198502889500833 28.236667571655744 26.81759298762751 22.74723655121592 37 21.629045257030256 33.2440540254407 23.613882098964865 21.513018618564182 38 24.10964699646796 29.75639024900434 22.971750359475468 23.162212395052233 39 22.350787549982062 30.707863475250946 24.95137762409534 21.989971350671656 40 20.85250174970513 29.92093364345371 25.74661720355494 23.479947403286218 41 21.842491684947987 31.98078370571471 24.170625832309366 22.00609877702794 42 22.163184098175524 30.846914829683307 24.368091656890478 22.62180941525069 43 22.42042365248093 28.348761051928683 24.634788001489724 24.59602729410066 44 21.24380071902069 29.298300185717824 23.990873390813846 25.46702570444764 45 22.435951375701904 27.97775246647819 28.26957459377822 21.316721564041686 46 21.297224688485443 29.793458959679146 26.296430594250374 22.612885757585037 47 22.73920369602993 30.88350774852161 25.69872914630042 20.67855940914804 48 23.182360307908333 29.590929552477473 23.46915977567853 23.75755036393566 49 21.32170723238055 29.586804494133034 22.900015729663476 26.19147254382294 50 19.881570853896957 29.118668834450435 26.664029132241545 24.33573117941106 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 46150.0 1 40067.0 2 37071.0 3 38712.0 4 33909.5 5 22088.0 6 10432.5 7 7627.0 8 8475.5 9 9150.0 10 9062.0 11 8382.5 12 7649.0 13 7176.0 14 7511.5 15 8207.5 16 8774.0 17 9621.5 18 10942.0 19 12325.0 20 13113.0 21 14526.5 22 17009.0 23 21211.0 24 25733.0 25 29408.0 26 32948.5 27 35902.5 28 39960.0 29 48429.5 30 57492.0 31 66164.5 32 79907.0 33 89058.5 34 94292.5 35 103143.5 36 112669.5 37 123176.5 38 130334.5 39 133303.5 40 137693.5 41 147273.5 42 159261.0 43 169550.5 44 176506.0 45 177571.5 46 184675.0 47 189801.5 48 197562.5 49 219154.5 50 244978.0 51 258883.0 52 252232.5 53 237114.5 54 224026.0 55 212128.0 56 195541.5 57 182909.0 58 174810.5 59 156167.5 60 132902.0 61 113115.5 62 94888.5 63 79591.5 64 63674.0 65 50870.0 66 37244.0 67 24771.5 68 17823.0 69 13540.5 70 10502.5 71 8000.5 72 6105.5 73 4410.0 74 2963.0 75 1934.5 76 1339.5 77 937.0 78 519.5 79 345.0 80 213.0 81 167.0 82 181.0 83 170.5 84 141.0 85 85.0 86 52.5 87 29.0 88 7.5 89 4.5 90 3.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 13562.0 25 15702.0 26 20737.0 27 19799.0 28 23339.0 29 19204.0 30 19578.0 31 19623.0 32 19623.0 33 18438.0 34 19566.0 35 18799.0 36 18543.0 37 16468.0 38 15132.0 39 17734.0 40 23367.0 41 22735.0 42 26285.0 43 39774.0 44 92748.0 45 215082.0 46 343260.0 47 238801.0 48 497542.0 49 318263.0 50 692566.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.992323483341854 #Duplication Level Percentage of deduplicated Percentage of total 1 75.00676923916632 10.4951897863479 2 10.376518676981268 2.903832119185207 3 3.6140618693853668 1.5170736829575366 4 1.6264853035752382 0.9103323403410484 5 0.9353153076056263 0.6543617171469657 6 0.6216874126779239 0.5219310830226811 7 0.4557159353775981 0.4463567349021945 8 0.3513849507352293 0.3933353518292375 9 0.26959574121011526 0.3395043738668924 >10 3.249836720198999 11.15096156460097 >50 1.8667327022551397 19.116899324240286 >100 1.5394764448413691 35.039083558460646 >500 0.049909049234403584 4.840598862116771 >1k 0.034165926321538025 8.224237458666522 >5k 0.0013398402479034518 1.250175581410755 >10k+ 0.001004880185927589 2.1961264609043916 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 21129 0.75292113731038 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA 13838 0.4931100713758833 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 11890 0.4236940850310198 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT 8216 0.2927729691013338 No Hit CCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGC 6761 0.24092478628214678 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC 6662 0.23739697178104743 No Hit AGAGCTCGTATGCCGTCTTCTGCTTG 5035 0.1794196566973242 Illumina Single End Adapter 1 (100% over 26bp) ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA 4502 0.160426473575244 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4479 0.15960688030731185 No Hit CCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGA 3824 0.13626628941620014 No Hit CCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCC 3184 0.11346021587373989 No Hit AGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA 3106 0.11068072566075254 Illumina Single End Adapter 1 (100% over 26bp) ACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3024 0.10775869748812482 No Hit ACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2960 0.10547809013387878 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCTA 2827 0.10073870297583624 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.039732456249755015 0.0 0.0 0.0 0.0 2 0.07971435392888068 0.0 0.0 0.0 0.0 3 0.10572753156324943 0.0 0.0 0.0 0.0 4 0.14118384902379316 0.0 0.0 0.0 0.0 5 0.1617093152120074 0.0 0.0 0.0 0.0 6 0.20261770962879552 0.0 0.0 0.0 0.0 7 0.23108966706696077 0.0 0.0 0.0 0.0 8 0.2607731971620692 0.0 0.0 0.0 0.0 9 0.2902785548076272 0.0 0.0 0.0 0.0 10 0.31561467713370417 0.0 0.0 0.0 0.0 11 0.3456545521279136 0.0 0.0 0.0 0.0 12 0.37573006161203304 0.0 0.0 0.0 0.0 13 0.41453602112412563 0.0 0.0 0.0 0.0 14 0.4395157985511016 0.0 0.0 0.0 0.0 15 0.4678808525195366 0.0 0.0 0.0 0.0 16 0.49788509302383593 0.0 0.0 0.0 0.0 17 0.5317022239485153 0.0 0.0 0.0 0.0 18 0.5656262583429249 0.0 0.0 0.0 0.0 19 0.5950959814985728 0.0 0.0 0.0 0.0 20 0.6231403250578169 0.0 0.0 0.0 0.0 21 0.6511133996372409 0.0 0.0 0.0 0.0 22 0.6753448527761049 0.0 0.0 0.0 0.0 23 0.701856913269215 0.0 0.0 0.0 0.0 24 0.728333339272415 0.0 0.0 0.0 0.0 25 0.7573398140592317 0.0 0.0 0.0 0.0 26 0.7891257790590357 0.0 0.0 0.0 0.0 27 0.8180966193559422 0.0 0.0 0.0 0.0 28 0.8488848186382636 0.0 0.0 0.0 0.0 29 0.8788534246526528 0.0 0.0 0.0 0.0 30 0.908786396177132 0.0 0.0 0.0 0.0 31 0.9390400781108019 0.0 0.0 0.0 0.0 32 0.9658728490131028 0.0 0.0 0.0 0.0 33 0.9938815580824368 0.0 0.0 0.0 0.0 34 1.0216051912324902 0.0 0.0 0.0 0.0 35 1.049542631322004 0.0 0.0 0.0 0.0 36 1.0722061669048237 0.0 0.0 0.0 0.0 37 1.0921971157443866 0.0 0.0 0.0 0.0 38 1.105524414970762 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGTCGA 30 3.3105607E-10 159.76413 44 ACGCGTG 25 3.990841E-6 127.8113 44 CACGGTA 20 2.6281676E-4 119.82309 44 CGTGCGC 95 0.0 109.312294 44 AAACGGT 20 0.0011478814 82.70254 43 TCGTGCG 220 0.0 80.1964 43 CTATCAT 2390 0.0 78.54513 44 CGAACGG 25 2.0452699E-6 73.983345 42 CCCGAGC 1520 0.0 72.524506 44 CGCGGTA 45 7.3854746E-5 71.00628 44 AACGACA 505 0.0 66.59875 43 CCTATCA 2000 0.0 65.33501 43 CTACCGC 50 1.2442413E-4 63.90565 44 ATGCGTC 50 1.2442413E-4 63.90565 44 CGGATAC 35 1.3343683E-4 63.011456 43 CCCTATC 2220 0.0 61.31953 42 TAACGGT 40 7.220369E-4 59.911545 44 AACGGTA 40 0.004121808 59.911545 44 GCCCGAG 1295 0.0 59.179684 43 ACCTTAG 3005 0.0 58.96509 42 >>END_MODULE