##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840976.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 623613 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.622142258099174 39.0 37.0 39.0 32.0 39.0 2 37.395949090221016 39.0 37.0 39.0 35.0 39.0 3 37.658990431565734 39.0 37.0 39.0 35.0 39.0 4 38.09901974461725 39.0 37.0 40.0 35.0 41.0 5 38.77522918861538 40.0 38.0 41.0 35.0 41.0 6 38.76117880801074 40.0 38.0 41.0 35.0 41.0 7 38.806142591639365 40.0 38.0 41.0 35.0 41.0 8 38.757710310721556 40.0 38.0 41.0 35.0 41.0 9 38.77055641880461 40.0 38.0 41.0 35.0 41.0 10 38.78213892269725 40.0 38.0 41.0 35.0 41.0 11 38.65122600074084 40.0 38.0 41.0 35.0 41.0 12 38.66971342803951 40.0 38.0 41.0 35.0 41.0 13 38.61052768303419 40.0 38.0 41.0 35.0 41.0 14 38.56386893794709 40.0 38.0 41.0 35.0 41.0 15 38.432426841646986 40.0 38.0 41.0 35.0 41.0 16 38.46591716336895 40.0 38.0 41.0 35.0 41.0 17 38.45606329566574 40.0 38.0 41.0 35.0 41.0 18 38.457721375276016 40.0 38.0 41.0 35.0 41.0 19 38.4514482539652 40.0 37.0 41.0 35.0 41.0 20 38.41132882091939 40.0 37.0 41.0 35.0 41.0 21 38.3279950866964 40.0 37.0 41.0 34.0 41.0 22 38.26806047981681 40.0 37.0 41.0 34.0 41.0 23 38.206549574816435 40.0 37.0 41.0 34.0 41.0 24 38.04884118836522 40.0 36.0 41.0 34.0 41.0 25 37.979052591160915 39.0 36.0 41.0 34.0 41.0 26 37.77560425855316 39.0 36.0 41.0 33.0 41.0 27 37.67858591210272 39.0 36.0 40.0 33.0 41.0 28 37.593163074935234 39.0 36.0 40.0 33.0 41.0 29 37.549905694083236 39.0 35.0 40.0 33.0 41.0 30 37.55020041337875 39.0 35.0 40.0 33.0 41.0 31 37.49612520714169 39.0 35.0 40.0 33.0 41.0 32 37.50548671245148 39.0 35.0 40.0 33.0 41.0 33 37.386699953521436 38.0 35.0 40.0 33.0 41.0 34 37.29648209241835 38.0 35.0 40.0 33.0 41.0 35 37.14022230259526 38.0 35.0 40.0 32.0 41.0 36 37.10138467193082 38.0 35.0 40.0 32.0 41.0 37 36.998857357165264 38.0 35.0 40.0 32.0 41.0 38 36.77747495385657 38.0 35.0 40.0 32.0 41.0 39 36.80616244909393 38.0 35.0 40.0 32.0 41.0 40 36.611939126025696 38.0 34.0 40.0 31.0 41.0 41 36.506311522245795 37.0 34.0 40.0 31.0 41.0 42 36.410177301485206 37.0 34.0 40.0 31.0 41.0 43 36.1170383907543 37.0 34.0 40.0 31.0 41.0 44 35.788546884302534 36.0 34.0 39.0 30.0 41.0 45 35.57290020393187 36.0 34.0 39.0 29.0 41.0 46 35.257699566930256 36.0 33.0 39.0 29.0 41.0 47 35.192508547763346 36.0 33.0 39.0 29.0 40.0 48 35.9431843350605 37.0 34.0 39.0 31.0 41.0 49 36.91204380245804 37.0 35.0 40.0 33.0 41.0 50 36.55616434220854 37.0 35.0 39.0 32.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 2.0 21 21.0 22 32.0 23 54.0 24 118.0 25 198.0 26 328.0 27 640.0 28 1267.0 29 2517.0 30 4649.0 31 8805.0 32 15470.0 33 26155.0 34 37793.0 35 40560.0 36 68330.0 37 102664.0 38 107852.0 39 108951.0 40 97205.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 45.74680130144817 15.390153829378155 38.86304486917367 2 22.23478343139094 28.879769985551935 30.480121485600847 18.405325097456274 3 24.03205192964226 28.408323752070597 18.996236447925234 28.563387870361908 4 17.88064071788112 31.798727736593047 25.849845978194807 24.47078556733102 5 13.451130749358978 33.46642869856786 27.38813975975485 25.694300792318316 6 18.93786691425612 32.817949593738426 23.62073914430905 24.623444347696406 7 20.521701760547007 33.49417026264687 19.983387132724943 26.000740844081182 8 19.067113738809166 30.15091090147255 28.221509173157074 22.560466186561218 9 16.73024776584196 37.38440346817658 26.86682285327599 19.018525912705474 10 27.490767511260987 25.45521020248135 24.931167246353105 22.122855039904557 11 17.56618287303183 32.000776122370766 22.8890353472426 27.544005657354802 12 17.98070277559961 29.84126373247511 24.48281225696065 27.695221234964635 13 18.51436708343155 31.29873815972406 23.14929291082771 27.037601846016678 14 14.756267107965998 32.2882941824497 23.843313080387997 29.11212562919631 15 15.710063773526208 39.80834267406228 26.334601748199603 18.146991804211908 16 14.887598558721516 44.34994138993254 19.79176187795957 20.970698173386378 17 17.97492996457739 43.35332970929086 18.747845218108026 19.923895108023725 18 18.236470375056324 32.24788450529415 20.894368783203685 28.62127633644584 19 18.03698768306626 27.587622451744913 24.29150771391873 30.083882151270096 20 16.719022855520972 29.83998088558128 26.78151353483651 26.659482724061235 21 16.931334016449302 39.383559996343884 23.24999639199311 20.4351095952137 22 20.900301950087634 31.42574000221291 19.913632332873114 27.760325714826344 23 22.43089865028471 28.445205600268114 25.92761857113306 23.196277178314116 24 17.533951344824434 32.6503777182323 23.761371235044813 26.054299701898454 25 18.635030443438446 30.030749970153494 21.22135138536198 30.112868201046076 26 17.547531974874797 38.09573300248783 25.423354487525092 18.933380535112278 27 19.383777136764717 32.920272365141976 21.79640640228148 25.899544095811827 28 16.93722765358525 28.08390082470285 23.136342960360206 31.842528561351696 29 19.171935888594387 30.23672031440845 27.883143752129154 22.70820004486801 30 21.264570763913877 28.70923742500188 30.252964360727347 19.773227450356895 31 18.228637222624002 36.578988625961536 22.303365009364576 22.88900914204989 32 18.52876706750998 31.038607182605393 24.1915836477646 26.241042102120037 33 17.5456583552056 27.549998632983375 31.463938101487315 23.440404910323707 34 18.545560195364814 35.28978942066184 24.013849515456066 22.15080086851728 35 16.24369874416166 31.829107691988213 23.331562434564717 28.595631129285415 36 16.610314752008026 29.89612783087806 25.744028177699274 27.74952923941464 37 15.087441969691925 39.85650368817768 18.704993103835037 26.351061238295358 38 23.05214780706316 29.522276656095254 22.0413113725269 25.38426416431469 39 16.892393830813663 34.1195222231481 27.45656694957174 21.531516996466493 40 16.667856913309574 32.07845629771401 25.345469088104437 25.908217700871976 41 16.79010921466025 35.22880282058261 22.79466237907347 25.18642558568367 42 18.15005396448156 38.013162245939945 21.56380709423979 22.272976695338702 43 17.70743895555674 26.641870760994067 25.581211493876708 30.069478789572486 44 20.285510912782257 28.72538027116212 21.359604394035863 29.62950442201976 45 18.318659864981672 26.89151259689731 33.990161424635204 20.79966611348581 46 16.399083324727602 33.01788747217785 27.243404530203925 23.339624672890626 47 15.858111082699116 35.61695475550892 24.804462499242103 23.720471662549855 48 21.038298244026915 30.237426028580966 24.46102638170968 24.26324934568244 49 15.425003747002396 28.724052008393286 21.82769409472422 34.0232501498801 50 17.762482642033447 35.19289983698605 25.00981102457284 22.034806496407654 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 19070.0 1 16986.0 2 11045.0 3 6750.5 4 5582.0 5 3817.5 6 2191.0 7 1880.0 8 2483.0 9 2881.0 10 2778.0 11 2434.5 12 2207.5 13 1921.5 14 1608.5 15 1446.5 16 1363.5 17 1385.0 18 1500.0 19 1701.0 20 2045.5 21 2797.0 22 3449.5 23 4044.0 24 4875.5 25 5056.5 26 5392.5 27 6928.0 28 7775.0 29 7441.0 30 8569.0 31 12591.5 32 18867.0 33 24689.0 34 36057.5 35 49066.0 36 47345.5 37 39365.0 38 36900.0 39 38161.5 40 40855.5 41 42048.0 42 42645.0 43 42490.0 44 41117.0 45 43200.0 46 47273.0 47 48328.0 48 52386.5 49 60159.0 50 69516.5 51 73581.0 52 61006.0 53 43230.0 54 32468.0 55 27215.5 56 24617.0 57 21454.5 58 17552.0 59 14764.5 60 12524.0 61 10305.5 62 8768.0 63 7851.5 64 6685.0 65 5324.5 66 3793.0 67 2164.0 68 1141.5 69 751.0 70 509.5 71 413.5 72 366.0 73 323.5 74 258.5 75 199.0 76 174.0 77 130.0 78 94.5 79 71.0 80 46.5 81 32.0 82 21.5 83 19.5 84 17.0 85 14.5 86 11.5 87 7.0 88 3.5 89 1.5 90 1.0 91 1.0 92 1.0 93 1.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 3775.0 25 4042.0 26 4264.0 27 4768.0 28 4999.0 29 4250.0 30 4322.0 31 3769.0 32 4208.0 33 3535.0 34 3820.0 35 3790.0 36 3464.0 37 3354.0 38 3224.0 39 3921.0 40 5329.0 41 4417.0 42 6455.0 43 11458.0 44 26888.0 45 50438.0 46 75784.0 47 58776.0 48 107059.0 49 81000.0 50 132504.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.85797441682582 #Duplication Level Percentage of deduplicated Percentage of total 1 68.90526788386711 8.859821716352931 2 11.367604509627856 2.9232873593077757 3 4.225281851740996 1.6298569786069244 4 2.1500548737902823 1.1058140224786845 5 1.3705976254614387 0.8811554601972699 6 0.9690212511224184 0.7475790273775562 7 0.7794572483288437 0.7015568950615205 8 0.607353087897835 0.6247464372936421 9 0.5025940337224384 0.5816107104887166 >10 5.482390501845755 17.300312854286233 >50 2.2074229272672854 20.231457650818697 >100 1.3593734410855034 27.92372833792753 >500 0.0374139479197845 3.4402746575199683 >1k 0.031178289933153743 7.275345446615128 >5k 0.0037413947919784497 3.3163195764039552 >10k+ 0.0012471315973261498 2.4571328692634697 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 15323 2.4571328692634697 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA 9227 1.4796035361674629 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT 5967 0.9568434269330498 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 5487 0.879872613303443 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA 4710 0.755276108740517 No Hit AGCTTTAATTTATTAATGCAAACAGTACCTAACAAACCCACAGGTCCT 3870 0.620577184888705 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC 2965 0.4754551300245505 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACA 2696 0.432319403219625 No Hit ACAACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAAT 2420 0.3880611853826011 No Hit AGCTTTAATTTATTAATGCAAACAGTACCTAACAAACCCACAGGTC 2311 0.3705823964542112 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAA 2214 0.3550278778665615 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA 2017 0.323437773106077 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAA 1742 0.27933991113078144 No Hit ACAACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAA 1549 0.24839122981721035 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCTA 1512 0.2424580629332615 No Hit AGCTTTAATTTATTAATGCAAACAGTACCTAACAAACCCACAGG 1503 0.24101486017770635 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACC 1474 0.23636454018758427 No Hit CCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCTAG 1467 0.23524204915548586 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAA 1355 0.2172821926419109 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAA 1339 0.21471649885425736 No Hit CGCAATAGATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAG 1277 0.2047744354270998 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAA 1200 0.19242703407401704 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1168 0.18729564649870994 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAG 1161 0.1861731554666115 No Hit CAGAGTGTTGCTTAACACAAAGCACCCAACTTACACTTAGGAGATTTCAA 1143 0.18328674995550126 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCC 1077 0.1727032630814303 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1072 0.17190148377278858 No Hit AATGCCCCAACTAAATACTACCGTATGGCCCACCATAATTACCCCCATAC 1069 0.17142041618760354 No Hit AACACAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCG 1059 0.16981685757032006 No Hit CGACAAACCTACCGAGCCTGGTGATAGCTGGTTGTCCAAGATAGAATC 991 0.15891265897279241 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTT 988 0.15843159138760737 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCC 936 0.1500930865777333 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTC 930 0.14913095140736324 No Hit AAAAAAAAAAAAAAAAAAAAAAAAA 912 0.14624454589625296 No Hit ACAACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAG 910 0.14592383417279625 No Hit CCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCT 878 0.14079244659748916 No Hit CAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCGCTCT 837 0.13421785626662688 No Hit CTGATGTTCGCCGACCGTTGACTATTCTCTACAAACCACAAAGACATTGG 837 0.13421785626662688 No Hit CGCAATAGATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCA 793 0.1271621983505796 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAG 754 0.12090831974317405 No Hit ATGTTGGATCAGGACATCCCAATGGTGCAGCCGCTATTAAAGGTTCGTT 717 0.11497515285922519 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 705 0.11305088251848502 No Hit TAGAATCTTAGTTCAACTTTAAATTTGCCCACAGAACCCTCTAAATCCCC 700 0.11224910320984328 No Hit CACTTAGGAGATTTCAACTTAACTTGACCGCTCTGACCAAAAAAAAAAAA 699 0.11208874734811494 No Hit CAGAGTGTTGCTTAACACAAAGCACCCAACTTACACTTAGGAGATTTC 679 0.10888163011354798 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 663 0.10631593632589444 No Hit AAAAAAAAAAAAAAAAAAAAAAAA 656 0.105193445293796 No Hit AATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATG 649 0.10407095426169756 No Hit ATGGCCCACCATAATTACCCCCATACTCCTTACACTATTCCTCATCACCC 633 0.101505260474044 No Hit ATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGC 631 0.1011845487505873 No Hit AACACAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGAC 627 0.10054312530367392 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.05436063712590982 0.0 0.0 0.0 0.0 2 0.12331365766909927 0.0 0.0 0.0 0.0 3 0.1746275334221705 0.0 0.0 0.0 0.0 4 0.22305500366413145 0.0 0.0 0.0 0.0 5 0.2604179194468364 0.0 0.0 0.0 0.0 6 0.32905022826656916 0.0 0.0 0.0 0.0 7 0.3922304377875381 0.0 0.0 0.0 0.0 8 0.4478739218072747 0.0 0.0 0.0 0.0 9 0.4918114279208419 0.0 0.0 0.0 0.0 10 0.5387956954072478 0.0 0.0 0.0 0.0 11 0.5857799628936536 0.0 0.0 0.0 0.0 12 0.6346885007207996 0.0 0.0 0.0 0.0 13 0.6720514165035045 0.0 0.0 0.0 0.0 14 0.7079711295306544 0.0 0.0 0.0 0.0 15 0.7475790273775563 0.0 0.0 0.0 0.0 16 0.7860644341923597 0.0 0.0 0.0 0.0 17 0.8335297692639505 0.0 0.0 0.0 0.0 18 0.8829193746762816 0.0 0.0 0.0 0.0 19 0.9223669166614551 0.0 0.0 0.0 0.0 20 0.9605316117528018 0.0 0.0 0.0 0.0 21 0.9940459868540265 0.0 0.0 0.0 0.0 22 1.0180993661132787 0.0 0.0 0.0 0.0 23 1.0463219977774678 0.0 0.0 0.0 0.0 24 1.074544629441657 0.0 0.0 0.0 0.0 25 1.1050122431700429 0.0 0.0 0.0 0.0 26 1.1402905327502795 0.0 0.0 0.0 0.0 27 1.1715599257873073 0.0 0.0 0.0 0.0 28 1.2050743008885318 0.0 0.0 0.0 0.0 29 1.2397111670218548 0.0 0.0 0.0 0.0 30 1.2680941545477724 0.0 0.0 0.0 0.0 31 1.3033724441280088 0.0 0.0 0.0 0.0 32 1.3322364992391114 0.0 0.0 0.0 0.0 33 1.3575727253921903 0.0 0.0 0.0 0.0 34 1.3865971363650214 0.0 0.0 0.0 0.0 35 1.414178344582297 0.0 0.0 0.0 0.0 36 1.4388731472884626 0.0 0.0 0.0 0.0 37 1.4595590534514193 0.0 0.0 0.0 0.0 38 1.4743117927304275 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACATC 10 0.003472777 184.02968 44 GCATTCT 10 0.003472777 184.02968 44 CCATCCA 20 6.48095E-7 184.02968 44 GTCAAGC 10 0.003472777 184.02968 44 CGATCAC 10 0.003472777 184.02968 44 CGTAGTG 15 4.7481226E-5 184.02966 44 TGGTCGA 15 4.7481226E-5 184.02966 44 AGAACCG 60 0.0 168.69386 44 GGCCGTG 30 2.6433554E-8 153.35806 44 TGAGTAC 30 2.6433554E-8 153.35806 44 TATAACT 25 1.9689141E-6 147.22372 44 CCTTGAA 25 1.9689141E-6 147.22372 44 GTCGCGC 40 9.113137E-10 138.02225 44 CCCGCCT 20 1.4941453E-4 138.02225 44 GTCAGTA 30 4.877209E-6 122.68645 44 GCTTATG 45 2.068191E-9 122.68644 44 TTTAACG 55 6.184564E-11 117.10979 44 GCCTTGA 20 6.3659572E-6 116.3178 43 GAGTCTT 15 2.9549468E-4 116.31779 43 CGACGAC 35 6.548362E-11 116.31779 43 >>END_MODULE