##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840974.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 9792782 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.628994702424706 35.0 33.0 39.0 22.0 39.0 2 34.84980856308248 35.0 33.0 39.0 27.0 39.0 3 35.52632745219898 35.0 35.0 39.0 32.0 39.0 4 35.648558499515254 35.0 35.0 39.0 33.0 39.0 5 36.44646485544149 35.0 35.0 40.0 33.0 41.0 6 36.521010372741884 35.0 35.0 40.0 34.0 41.0 7 36.53272185575049 35.0 35.0 40.0 33.0 41.0 8 36.470928383783075 35.0 35.0 40.0 33.0 41.0 9 36.4747024900585 35.0 35.0 40.0 33.0 41.0 10 36.5040096879518 35.0 35.0 40.0 33.0 41.0 11 36.4394507097166 35.0 35.0 40.0 33.0 41.0 12 36.38268635000759 35.0 35.0 40.0 33.0 41.0 13 36.33240472421422 35.0 35.0 40.0 33.0 41.0 14 36.36194055989401 35.0 35.0 40.0 33.0 41.0 15 36.3928438313035 35.0 35.0 40.0 33.0 41.0 16 36.37081188981844 35.0 35.0 40.0 33.0 41.0 17 36.36701307146427 35.0 35.0 40.0 33.0 41.0 18 36.350319755918186 35.0 35.0 40.0 33.0 41.0 19 36.296150164478284 35.0 35.0 40.0 33.0 41.0 20 36.26563534243895 35.0 35.0 40.0 33.0 41.0 21 36.18079663164155 35.0 35.0 40.0 33.0 41.0 22 36.109369839949466 35.0 35.0 40.0 33.0 41.0 23 36.038566262375696 35.0 35.0 40.0 33.0 41.0 24 35.96004189616393 35.0 35.0 40.0 33.0 41.0 25 35.88230263066715 35.0 35.0 39.0 33.0 41.0 26 35.81541697342185 35.0 34.0 39.0 33.0 41.0 27 35.723204103601795 35.0 34.0 39.0 32.0 41.0 28 35.614369586875966 35.0 34.0 39.0 32.0 41.0 29 35.619905744252684 35.0 34.0 39.0 32.0 41.0 30 35.62227383088556 35.0 34.0 39.0 32.0 41.0 31 35.53091521744948 35.0 34.0 39.0 32.0 41.0 32 35.53044480896835 35.0 34.0 39.0 32.0 41.0 33 35.40597738796334 35.0 34.0 38.0 31.0 41.0 34 35.34245629508764 35.0 34.0 38.0 31.0 41.0 35 35.2977942888895 35.0 34.0 38.0 31.0 41.0 36 35.27686297584482 35.0 34.0 38.0 31.0 41.0 37 35.20925754371407 35.0 34.0 38.0 31.0 41.0 38 35.127914422710774 35.0 34.0 38.0 31.0 41.0 39 35.04797776961284 35.0 34.0 38.0 31.0 41.0 40 34.833141746470694 35.0 34.0 37.0 30.0 40.0 41 34.75405334259355 35.0 34.0 37.0 30.0 40.0 42 34.67219080539552 35.0 33.0 37.0 30.0 40.0 43 34.58653248994887 35.0 33.0 37.0 30.0 40.0 44 34.39574591226152 35.0 33.0 36.0 29.0 40.0 45 34.25347604299159 35.0 33.0 36.0 29.0 40.0 46 34.03805200769572 35.0 32.0 36.0 28.0 40.0 47 34.02298748644011 35.0 33.0 36.0 29.0 39.0 48 34.78020330456507 35.0 34.0 37.0 31.0 39.0 49 35.32474043557092 35.0 34.0 37.0 32.0 40.0 50 35.6815291027628 36.0 34.0 38.0 31.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 9.0 20 76.0 21 335.0 22 821.0 23 2076.0 24 5019.0 25 11001.0 26 19193.0 27 36114.0 28 65892.0 29 116329.0 30 202712.0 31 376114.0 32 711348.0 33 1389437.0 34 2497387.0 35 673390.0 36 450747.0 37 755308.0 38 768197.0 39 829497.0 40 881779.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 53.05613869480603 20.998711091495757 25.94515021369821 2 27.883588136650033 24.707391627833644 28.97860893870608 18.43041129681024 3 28.181399320438256 21.583835931403353 22.902531680987078 27.332233067171313 4 20.93736999353197 26.335049631453046 27.30985944545687 25.41772092955812 5 19.141445199127276 31.321926700706705 26.591034090210524 22.945594009955496 6 23.737963328500523 35.47935612168228 23.56628586238313 17.21639468743407 7 26.618697322170554 32.649108292209505 22.04299043928477 18.689203946335166 8 24.884236164963134 29.091008050623408 25.326265814964533 20.69848996944893 9 21.97582872773028 31.3550122937486 27.526304578208727 19.14285440031239 10 26.63346329980592 28.051150326842773 25.45740321800281 19.8579831553485 11 23.691357573363728 28.412855509292456 27.41897042127559 20.476816496068224 12 22.729955593824105 28.563752363730753 28.02588682153856 20.680405220906582 13 20.133216485366468 29.050345448310804 29.675264904293797 21.14117316202893 14 16.619781794386927 31.374179472186757 28.585901330183805 23.42013740324251 15 18.040603783480528 33.718365220424594 26.76834836106839 21.47268263502649 16 18.63977978882814 38.638090789726554 23.523100994181227 19.199028427264082 17 20.422582673646776 37.888334489627155 21.2149519921918 20.47413084453427 18 21.28416623590722 31.000363328827298 24.971739389276713 22.743731045988767 19 21.529397876926087 30.3019203327512 26.067699658789508 22.100982131533208 20 22.20743809062634 28.900296156904137 25.363742397206433 23.52852335526309 21 21.955425945354445 30.795692174093126 25.98029855050383 21.268583330048603 22 22.433451495193093 33.581008951286776 22.455386017987532 21.5301535355326 23 23.36085904904245 30.637105982753422 24.08601559801903 21.916019370185104 24 23.419534918677858 29.751657904771083 24.27121322623132 22.557593950319735 25 20.16258610149081 31.232885572215917 26.3961723431155 22.208355983177775 26 21.69081596154771 32.69402355260575 26.95494119897983 18.66021928686671 27 23.465226618549785 30.829987118664327 22.989428506927037 22.71535775585885 28 21.788192197167785 31.086739845186013 24.08322943085941 23.041838526786794 29 24.243370320899388 32.11599619182266 23.142285712366753 20.498347774911196 30 23.30124822522721 33.04947513968295 23.79196288394357 19.857313751146275 31 20.677482886781554 32.68491173866717 24.54213430641711 22.095471068134167 32 22.355558595239895 32.780919539293436 25.10996999074016 19.753551874726508 33 22.723761620625645 30.363240405717246 24.982527807748937 21.930470165908172 34 19.180974665939406 34.18728868534014 24.558547386165166 22.07318926255529 35 21.560286968134687 32.76688589570751 24.012315775775303 21.660511360382504 36 20.68946415171002 33.45811146136743 24.614397191104477 21.238027195818074 37 19.690951736451552 33.930488969616576 24.180472003191344 22.198087290740524 38 22.8847308862696 32.19419752140709 23.70340148742219 21.21767010490112 39 22.009632095004132 33.648525304754855 24.662402870005828 19.679439730235185 40 19.92594433057353 33.53266043316053 25.800536006721703 20.740859229544238 41 20.635945851475345 34.676407245891404 23.955149134925424 20.732497767707827 42 21.836703464102143 34.30788695485967 22.180763431776146 21.67464614926204 43 19.623157527482807 32.29470796987069 24.83043682061819 23.251697682028315 44 20.16393633800331 32.219805834300445 23.369674530620756 24.246583297075492 45 20.668168134629216 31.37823399031598 26.601459814884187 21.352138060170617 46 19.395438161728695 33.3452991472667 27.004487252163774 20.25477543884083 47 22.842887349992726 31.316131402184826 25.701699529605293 20.13928171821715 48 21.16614848123032 33.909901479436535 23.154084933465487 21.76986510586766 49 18.916495789614423 34.634779196859114 22.834484801001643 23.61424021252482 50 22.073672787648857 33.63261073443286 24.22016269100326 20.073553786915017 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 302434.0 1 240212.5 2 162713.5 3 135778.0 4 108073.5 5 82006.5 6 58831.0 7 44387.0 8 41118.0 9 38206.0 10 36088.5 11 33980.5 12 31971.5 13 31732.5 14 35308.0 15 39804.0 16 42321.0 17 43190.0 18 44864.0 19 51286.0 20 59761.5 21 69407.0 22 78975.5 23 89206.5 24 99895.5 25 111345.0 26 128195.5 27 149337.5 28 171585.0 29 193469.0 30 217929.0 31 249549.0 32 294982.5 33 342217.0 34 400020.5 35 448700.5 36 473492.5 37 502219.0 38 526287.5 39 560540.5 40 602500.0 41 646879.0 42 710456.0 43 768535.5 44 779853.5 45 751452.0 46 723304.5 47 692105.5 48 683091.5 49 718956.0 50 775587.0 51 783534.5 52 732683.5 53 664915.5 54 578462.5 55 537875.0 56 519568.5 57 476936.5 58 406992.0 59 338582.5 60 316280.0 61 295916.0 62 263037.0 63 221767.0 64 172679.0 65 130733.0 66 98031.5 67 73777.5 68 55452.5 69 42003.5 70 33701.5 71 26368.5 72 21031.0 73 15802.0 74 9946.5 75 6097.0 76 4645.5 77 3378.5 78 2304.0 79 1798.0 80 1305.5 81 951.5 82 657.0 83 419.0 84 279.5 85 184.5 86 121.0 87 84.0 88 32.0 89 14.5 90 43.5 91 73.5 92 74.0 93 74.0 94 38.0 95 2.0 96 2.0 97 2.0 98 1.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 52097.0 25 50547.0 26 51386.0 27 59256.0 28 50528.0 29 46064.0 30 104335.0 31 50115.0 32 56578.0 33 51917.0 34 52530.0 35 51248.0 36 54166.0 37 54485.0 38 58698.0 39 90361.0 40 98417.0 41 101389.0 42 123056.0 43 217868.0 44 483186.0 45 884199.0 46 1086557.0 47 1042166.0 48 1620501.0 49 1436437.0 50 1764695.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.08263245104839 #Duplication Level Percentage of deduplicated Percentage of total 1 70.43386424775147 7.805926295648676 2 12.644441805321465 2.802674021540972 3 4.3245836724092905 1.4378331403535167 4 2.1116325994024185 0.9360979188331566 5 1.1525354552473497 0.6386563418654054 6 0.7813537499977273 0.5195673855283899 7 0.5993321928983409 0.46495248869812034 8 0.4487222537807 0.3978419049006046 9 0.3612090983514593 0.36028329075034315 >10 3.49246673040899 8.733581999822674 >50 1.673090168049075 13.863825725275692 >100 1.8616072086990545 34.2405121635788 >500 0.06306425730243713 4.803372935616645 >1k 0.04265215469730047 9.403198669810815 >5k 0.0047222028414868385 3.5230362220162013 >10k+ 0.0047222028414868385 10.068639495760033 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGGCAAGTTTGAATTTCGTGGAGGCTCGGG 51893 0.5299107036182363 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 49272 0.5031460927037894 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAA 38901 0.3972415601613515 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA 31589 0.3225743205556909 No Hit AAGCAGTGTGGATTCTTTACTGTGTTCTGACAGCCATGTGTCACTATACG 27057 0.27629533670819995 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAA 25004 0.25533091617887543 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 23978 0.2448538117156085 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 21604 0.2206114666904665 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATG 21081 0.21527079843092597 No Hit CACTTAGGAGATTTCAACTTAACTTGACCGCTCTGACCAAAAAAAAAAAA 20387 0.20818394609417426 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT 18625 0.19019110197694586 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 18569 0.1896192522206662 No Hit AAGCAGTGTGGATTCTTTACTGTGTTCTGACAGCCATGTGTCACTATA 17909 0.18287959437879858 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGAAG 16549 0.16899181458343504 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAA 15116 0.15435858778434974 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 15030 0.15348038994434882 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAG 14564 0.14872178304387865 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA 14228 0.14529068450620058 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 13783 0.14074652126433532 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 13569 0.1385612382671237 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 13265 0.1354569110187483 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGGTTGTGAGGG 13099 0.13376178495549068 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAAT 12886 0.13158671356106977 No Hit CACTTAGGAGATTTCAACTTAACTTGACCGCTCTGACCAAAAAAAAAA 12620 0.1288704272187413 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCG 12173 0.12430584077129461 No Hit ACTATGAGAATCGAACCCATCCCTGAGAATCCAAAATTCTCCGTGCCA 11904 0.12155891962059402 No Hit AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATGA 10995 0.11227657268384 No Hit ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCC 10610 0.10834510560941724 No Hit TTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 10062 0.10274914728010896 No Hit AAGCAGTGTGGATTCTTTACTGTGTTCTGACAGCCATGTGTCACTA 10050 0.10262660804662045 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 10038 0.10250406881313195 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.03271797534143005 0.0 0.0 0.0 0.0 2 0.05905369893866728 0.0 0.0 0.0 0.0 3 0.08081462448566709 0.0 0.0 0.0 0.0 4 0.1061598226122056 1.0211602790708503E-5 0.0 0.0 0.0 5 0.13372093854432784 1.0211602790708503E-5 0.0 0.0 0.0 6 0.17582337685041902 1.0211602790708503E-5 0.0 0.0 0.0 7 0.2027105269983545 1.0211602790708503E-5 0.0 0.0 0.0 8 0.2292504826514059 1.0211602790708503E-5 0.0 0.0 0.0 9 0.25466716199747935 1.0211602790708503E-5 0.0 0.0 0.0 10 0.27769432629052704 1.0211602790708503E-5 0.0 0.0 0.0 11 0.30112995469520304 1.0211602790708503E-5 0.0 0.0 0.0 12 0.3236771736570874 1.0211602790708503E-5 0.0 0.0 0.0 13 0.3458261401101342 1.0211602790708503E-5 0.0 0.0 0.0 14 0.36983361827108985 1.0211602790708503E-5 0.0 0.0 0.0 15 0.3925442228776256 1.0211602790708503E-5 0.0 0.0 0.0 16 0.41738905246741936 1.0211602790708503E-5 0.0 0.0 0.0 17 0.44391879651768007 1.0211602790708503E-5 0.0 0.0 0.0 18 0.46947843830282343 1.0211602790708503E-5 0.0 0.0 0.0 19 0.49544654419959516 1.0211602790708503E-5 0.0 0.0 0.0 20 0.5210776672042735 1.0211602790708503E-5 0.0 0.0 0.0 21 0.545268954215462 1.0211602790708503E-5 0.0 0.0 0.0 22 0.5706447871503726 1.0211602790708503E-5 0.0 0.0 0.0 23 0.5959797736741204 1.0211602790708503E-5 0.0 0.0 0.0 24 0.619885135807169 1.0211602790708503E-5 0.0 0.0 0.0 25 0.6456490096481265 1.0211602790708503E-5 0.0 0.0 0.0 26 0.6715149995169912 1.0211602790708503E-5 0.0 0.0 0.0 27 0.6960841158314358 1.0211602790708503E-5 0.0 0.0 0.0 28 0.72410475388914 1.0211602790708503E-5 0.0 0.0 0.0 29 0.753177187034287 1.0211602790708503E-5 0.0 0.0 0.0 30 0.7829746439775745 1.0211602790708503E-5 0.0 0.0 0.0 31 0.8133847970883045 1.0211602790708503E-5 0.0 0.0 0.0 32 0.8435396601292666 1.0211602790708503E-5 0.0 0.0 0.0 33 0.8724895540409252 2.0423205581417006E-5 0.0 0.0 0.0 34 0.9010207722381648 2.0423205581417006E-5 0.0 0.0 0.0 35 0.9277139019330768 2.0423205581417006E-5 0.0 0.0 0.0 36 0.94995477281124 2.0423205581417006E-5 0.0 0.0 0.0 37 0.9695814733749817 2.0423205581417006E-5 0.0 0.0 0.0 38 0.9831424818810426 2.0423205581417006E-5 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATACG 4355 0.0 137.83185 44 CTATGCG 675 0.0 135.67915 44 CTATCAT 5160 0.0 100.93251 44 CGTGCGC 1480 0.0 95.43047 44 TCGTGCG 2700 0.0 83.15354 43 CCTTAGC 8330 0.0 76.84028 43 GAACACA 4490 0.0 74.216324 44 CAATGAA 11135 0.0 67.10059 43 AACGCTT 1115 0.0 64.936714 43 TACGGGC 210 0.0 63.05228 44 CCAGAAT 5175 0.0 61.620655 44 ACCTTAG 7615 0.0 57.68576 42 ACGACGC 115 3.9616498E-7 57.569473 44 CCCTATC 5165 0.0 56.334076 42 CCTATCA 5215 0.0 55.535515 43 ACTATAC 6555 0.0 55.228397 43 AACCTTA 10720 0.0 54.459583 41 CTCGTGC 3460 0.0 53.72677 42 CACTATA 7390 0.0 52.93464 42 GCAATGA 11125 0.0 52.199432 42 >>END_MODULE