ERR840969.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR840969.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6845457
Sequences flagged as poor quality	0
Sequence length	24-50
%GC	53

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCC	41332	0.6037873001028273	No Hit
CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGG	28743	0.41988431159526673	No Hit
CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGC	18025	0.26331331859947404	No Hit
TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	13751	0.20087775001727423	No Hit
TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10396	0.15186714342081178	No Hit
TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	7975	0.11650062223749269	No Hit
TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	7525	0.10992691941531442	No Hit
ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA	7291	0.10650859394778173	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTATCAT	3645	0.0	138.86647	44
TCATACG	100	0.0	105.01416	44
TAAGCCA	2145	0.0	100.85277	44
TAAACGT	165	0.0	95.46742	44
ACGACAC	320	0.0	91.8874	44
TCGAATC	50	9.0221874E-10	83.69358	43
AACGACA	440	0.0	76.08507	43
TCGCAAA	645	0.0	73.2203	43
CCTATCA	4035	0.0	71.55956	43
CCCATAC	635	0.0	71.11196	44
ACCGCAT	60	1.996714E-5	70.009445	44
TTAAGCC	1870	0.0	67.453575	43
TATAGCG	45	3.8800517E-6	66.42348	43
CGATACT	65	7.203198E-9	64.37968	43
TGATCGA	115	7.617928E-9	63.921665	44
ACTTCTA	1250	0.0	61.328274	44
AGGCCGA	14785	0.0	59.69002	42
GTGTTAG	1425	0.0	59.57137	43
CATGACG	145	0.0	57.71971	43
ATTAAGC	2195	0.0	56.56393	42