##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840967.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 13891577 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 37.37991273416978 39.0 37.0 39.0 35.0 39.0 2 37.86464978022293 39.0 38.0 39.0 35.0 39.0 3 38.065197133485995 39.0 38.0 39.0 35.0 40.0 4 38.72093038824894 39.0 38.0 41.0 35.0 41.0 5 39.26373917086591 40.0 39.0 41.0 35.0 41.0 6 39.22071792137063 40.0 38.0 41.0 35.0 41.0 7 39.21098007807177 40.0 38.0 41.0 35.0 41.0 8 39.12637643659895 40.0 38.0 41.0 35.0 41.0 9 39.007709707832305 40.0 38.0 41.0 35.0 41.0 10 38.90542369667605 40.0 38.0 41.0 35.0 41.0 11 38.7668090527087 40.0 38.0 41.0 35.0 41.0 12 38.721475394766195 40.0 38.0 41.0 35.0 41.0 13 38.62198114728083 40.0 38.0 41.0 35.0 41.0 14 38.57594238580688 40.0 38.0 41.0 35.0 41.0 15 38.586021083135485 40.0 38.0 41.0 35.0 41.0 16 38.54790942741778 40.0 38.0 41.0 35.0 41.0 17 38.55317484832715 40.0 38.0 41.0 35.0 41.0 18 38.61137407221657 40.0 38.0 41.0 35.0 41.0 19 38.72439975677347 40.0 38.0 41.0 35.0 41.0 20 38.68563223599452 40.0 38.0 41.0 35.0 41.0 21 38.636034051425554 40.0 38.0 41.0 35.0 41.0 22 38.53839697249636 40.0 37.0 41.0 35.0 41.0 23 38.423796736684395 40.0 37.0 41.0 34.0 41.0 24 38.22418916153292 40.0 37.0 41.0 34.0 41.0 25 38.163566804330316 40.0 37.0 41.0 34.0 41.0 26 38.08260706479912 40.0 36.0 41.0 33.0 41.0 27 37.994733781976336 40.0 36.0 41.0 33.0 41.0 28 37.908155341231584 40.0 35.0 41.0 33.0 41.0 29 37.755488202944804 39.0 35.0 41.0 33.0 41.0 30 37.63675314966142 39.0 35.0 41.0 33.0 41.0 31 37.47949859160779 39.0 35.0 41.0 33.0 41.0 32 37.34245556411604 39.0 35.0 41.0 33.0 41.0 33 37.22199764648199 39.0 35.0 41.0 33.0 41.0 34 37.13807069830046 38.0 35.0 41.0 33.0 41.0 35 36.980109725171495 38.0 35.0 40.0 33.0 41.0 36 36.88322444135279 38.0 35.0 40.0 32.0 41.0 37 36.78206779446149 38.0 35.0 40.0 32.0 41.0 38 36.72729385494905 37.0 35.0 40.0 32.0 41.0 39 36.670799517442795 37.0 35.0 40.0 32.0 41.0 40 36.5715368346299 37.0 35.0 40.0 32.0 41.0 41 36.45215003327724 37.0 35.0 40.0 32.0 41.0 42 36.338603067710075 36.0 35.0 40.0 32.0 41.0 43 36.209182936154846 36.0 35.0 40.0 32.0 41.0 44 36.053467346804645 36.0 35.0 40.0 31.0 41.0 45 35.882540687468904 35.0 34.0 40.0 31.0 41.0 46 35.64063339236496 35.0 34.0 39.0 31.0 41.0 47 35.462048045540705 35.0 34.0 39.0 30.0 41.0 48 35.531544679975966 35.0 34.0 39.0 30.0 41.0 49 35.511008980302236 35.0 34.0 39.0 30.0 41.0 50 36.11256643158055 37.0 34.0 39.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 10.0 20 35.0 21 88.0 22 198.0 23 489.0 24 1191.0 25 2531.0 26 5355.0 27 11302.0 28 24161.0 29 48824.0 30 95174.0 31 175609.0 32 299111.0 33 514767.0 34 919740.0 35 867424.0 36 1361396.0 37 2015832.0 38 2283152.0 39 2747807.0 40 2517380.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 43.45617491808165 18.32803431892578 38.21579076299257 2 26.934436601402417 18.341409330272583 30.692267695741094 24.031886372583905 3 23.801566949526322 17.343948782776785 29.94115786854149 28.9133263991554 4 21.650788819728675 18.500923257309086 33.72674679051917 26.12154113244306 5 22.743285373575656 18.637624799545797 30.205764255562922 28.413325571315625 6 24.106780677240604 20.385633682914474 28.02790496716104 27.479680672683887 7 28.99074741478235 18.208011948535432 21.666345008921592 31.134895627760624 8 27.58989134207009 19.783894945836604 23.04179719840303 29.584416513690275 9 27.826387169721624 19.234590860346525 25.59464630977462 27.344375660157233 10 29.471470373737986 17.384520130435874 23.888266969257703 29.25574252656844 11 28.996923819376303 18.743307545284456 23.5271560601075 28.73261257523174 12 29.41131161710438 20.22395297524536 22.15302841426859 28.211706993381675 13 30.629445454608934 17.566846442272176 24.33748882506284 27.466219278056048 14 27.54477767354995 19.271836451685793 22.16588512592919 31.01750074883507 15 26.743047243664268 21.074741910151744 22.93411323998708 29.248097606196904 16 28.77946830658607 20.761969645346962 21.024654004365377 29.43390804370159 17 29.051568443237226 22.91991758747045 19.13600594086618 28.892508028426146 18 26.995451992239616 20.660476488738464 20.237745505783828 32.106326013238096 19 29.908886514468442 19.116987221825138 21.579047504829727 29.395078758876693 20 29.11087776427399 19.63596357706544 23.355181344781805 27.897977313878762 21 28.947397404916664 23.83039017096475 19.565741168191344 27.656471255927244 22 31.78015714126625 21.11727847745436 21.11655141817232 25.98601296310707 23 32.562638496694795 20.725811043627374 21.338837196093717 25.372713263584114 24 31.525002524911315 21.33684318202318 22.4265394778433 24.7116148152222 25 31.218963355167368 22.22054980021271 20.666154953774697 25.89433189084523 26 31.19261317238649 22.09807590995742 22.17905217546705 24.530258742189044 27 30.206734556039716 23.33134604447912 21.065829442675827 25.396089956805334 28 31.28093369214446 21.088695613864402 20.73921455608137 26.891156137909768 29 30.14508371287134 23.137321639769493 21.223459706930782 25.49413494042839 30 31.020039805525606 23.254567812192793 20.201144548132262 25.52424783414934 31 29.57866405881237 22.55018599412232 21.59329051199533 26.277859435069978 32 28.33646304111931 21.745357107079023 24.087508675387532 25.83067117641414 33 27.393627898164556 20.323384513384088 23.781055902388413 28.501931686062942 34 29.686434002510836 20.807239262387725 23.45133145773183 26.054995277369606 35 26.832456150138572 20.184829854419267 23.587187418118774 29.395526577323388 36 28.256342483666202 20.71357731640301 24.942077827765637 26.088002372165146 37 26.558289428990996 24.315286155496516 23.749467953970175 25.37695646154232 38 28.111528099178674 21.458229653693078 22.591554137257717 27.838688109870528 39 27.928831103163066 21.837513650780217 22.397575623012884 27.836079623043837 40 27.369666165491452 21.965246853893053 23.27048258651233 27.394604394103165 41 27.054269127367604 22.190499235488208 21.98110723855266 28.774124398591532 42 26.364691243388584 23.067442096229808 22.22578805886687 28.342078601514743 43 26.7620010421312 21.71085709004376 22.873114239754514 28.654027628070526 44 26.472111487411436 23.054980681775973 21.73983417876962 28.733073652042968 45 27.38736570212022 20.36591772017443 24.95892539925495 27.287791178450398 46 27.37770045862421 22.659448668244746 22.882154830016812 27.080696043114227 47 26.423468713566205 21.851716722388083 23.858471116661814 27.8663434473839 48 25.57957231719109 22.69240235504405 21.55922415565933 30.168801172105532 49 26.103571859579116 24.410035883564973 20.833659027523282 28.65273322933263 50 21.916389623755443 26.09931054215002 26.918588885401384 25.065710948693148 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 102126.0 1 80844.0 2 67470.5 3 66349.0 4 50542.5 5 34928.0 6 23122.0 7 24049.0 8 31091.0 9 35433.5 10 37134.0 11 37204.0 12 35246.0 13 32747.5 14 32603.0 15 33835.0 16 34713.0 17 35136.5 18 34881.5 19 35202.5 20 36387.5 21 39700.0 22 43934.5 23 50515.5 24 58243.0 25 66079.5 26 76699.5 27 87281.5 28 95257.5 29 104779.0 30 119714.5 31 142463.5 32 174108.5 33 194992.5 34 212742.5 35 229320.0 36 231920.5 37 239712.0 38 253935.0 39 281873.0 40 318544.5 41 362790.0 42 410545.5 43 420176.0 44 406749.5 45 411055.0 46 460144.0 47 524515.0 48 584976.5 49 676238.0 50 783682.0 51 855812.0 52 894914.5 53 885955.0 54 867905.5 55 880460.5 56 889230.0 57 908228.5 58 936075.5 59 946427.5 60 955431.0 61 967725.0 62 941808.0 63 914831.0 64 893678.0 65 857320.0 66 808352.5 67 771888.5 68 755714.5 69 725665.0 70 666008.0 71 610328.0 72 566955.5 73 531651.5 74 490228.0 75 434966.0 76 377954.0 77 299356.0 78 242082.0 79 211599.0 80 173570.0 81 129210.0 82 95325.0 83 73052.0 84 57360.5 85 46151.0 86 33499.5 87 24208.5 88 15682.0 89 9120.0 90 6272.5 91 4112.5 92 3074.5 93 2503.0 94 1653.5 95 592.0 96 295.0 97 263.0 98 140.0 99 31.0 100 30.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 72630.0 25 70474.0 26 64839.0 27 64584.0 28 68804.0 29 87291.0 30 75704.0 31 91015.0 32 116817.0 33 94550.0 34 89674.0 35 78725.0 36 74536.0 37 88305.0 38 88602.0 39 81936.0 40 94075.0 41 99840.0 42 141198.0 43 212969.0 44 643541.0 45 1317207.0 46 1522791.0 47 1831256.0 48 2204219.0 49 2642639.0 50 1873356.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.252540414789603 #Duplication Level Percentage of deduplicated Percentage of total 1 73.02133456547557 12.598035257327403 2 12.563358172131425 4.334996892203493 3 4.227621547674584 2.188116348290734 4 1.9354339202530995 1.335646077172851 5 1.0387143525279119 0.8960230673204908 6 0.710140263432236 0.7351034157020393 7 0.5122905045897902 0.6186818844183821 8 0.38327715119720696 0.5290003632876191 9 0.2990385913326741 0.4643257844293841 >10 2.9292953380080258 12.078045215167418 >50 1.3660604217873042 17.075807962125204 >100 0.932318238007091 27.728339581129436 >500 0.04872460104493409 5.754652480342124 >1k 0.029806390024694318 9.515548789319574 >5k 0.0019054313257795454 2.247305019406648 >10k+ 6.805111877784091E-4 1.9003718623571826 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA 31958 0.23005307460772814 No Hit CTCTTTCCCTGCCGCCGCCGAGTCGCGCGGAGGCGGAGGCTTGGG 15276 0.10996591675660726 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.02862166044934999 0.0 0.0 0.0 0.0 2 0.04902251198694 0.0 0.0 0.0 0.0 3 0.06143291002886137 0.0 0.0 0.0 0.0 4 0.07581572632106491 0.0 0.0 0.0 0.0 5 0.08716792917031665 0.0 0.0 0.0 0.0 6 0.10492689202960902 0.0 0.0 0.0 0.0 7 0.11802835631980443 0.0 0.0 0.0 0.0 8 0.13010041984434165 0.0 0.0 0.0 0.0 9 0.1422948596836774 0.0 0.0 0.0 0.0 10 0.15330872801554496 0.0 0.0 0.0 0.0 11 0.16423621306637828 0.0 0.0 0.0 0.0 12 0.17643065290571402 0.0 0.0 0.0 0.0 13 0.18750930869835727 0.0 0.0 0.0 0.0 14 0.1983432118614035 0.0 0.0 0.0 0.0 15 0.21239489224297572 0.0 0.0 0.0 0.0 16 0.22379748533949745 0.0 0.0 0.0 0.0 17 0.23675497749463578 0.0 0.0 0.0 1.4397213505709251E-5 18 0.26239641474830394 0.0 0.0 0.0 1.4397213505709251E-5 19 0.2747348267226968 0.0 0.0 0.0 1.4397213505709251E-5 20 0.2863317822015456 0.0 0.0 0.0 1.4397213505709251E-5 21 0.2998939573239237 0.0 0.0 0.0 1.4397213505709251E-5 22 0.3125707038157007 0.0 0.0 0.0 1.4397213505709251E-5 23 0.3253914224425348 0.0 0.0 0.0 1.4397213505709251E-5 24 0.33782341630471474 0.0 0.0 0.0 1.4397213505709251E-5 25 0.35124161929203573 0.0 0.0 0.0 1.4397213505709251E-5 26 0.3686694462406968 0.0 0.0 0.0 1.4397213505709251E-5 27 0.38187169102543217 0.0 0.0 0.0 1.4397213505709251E-5 28 0.39546985918157457 0.0 0.0 0.0 1.4397213505709251E-5 29 0.4097734907994967 0.0 0.0 0.0 1.4397213505709251E-5 30 0.42445144996856726 0.0 0.0 0.0 1.4397213505709251E-5 31 0.43870469133921947 0.0 0.0 0.0 1.4397213505709251E-5 32 0.4536705947784042 0.0 0.0 0.0 1.4397213505709251E-5 33 0.4677294737667293 0.0 0.0 0.0 1.4397213505709251E-5 34 0.4792616417848024 0.0 0.0 0.0 1.4397213505709251E-5 35 0.4898651895317573 0.0 0.0 0.0 1.4397213505709251E-5 36 0.4997416779966738 0.0 0.0 0.0 1.4397213505709251E-5 37 0.5078545078071409 0.0 0.0 0.0 1.4397213505709251E-5 38 0.513253462871782 0.0 0.0 0.0 1.4397213505709251E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATCAT 13585 0.0 216.8068 44 ACATTGG 2025 0.0 103.52684 44 CCTATCA 13505 0.0 91.84999 43 ACTTCTA 3815 0.0 89.780716 44 AACGACA 1320 0.0 88.94304 43 CATGACC 2015 0.0 82.0602 44 ACCACTC 1345 0.0 76.83612 44 CCCTATC 17970 0.0 71.226974 42 ACGGACA 240 0.0 67.666084 44 GCTATAC 180 2.401066E-10 65.61561 44 CCCATAC 2420 0.0 62.83643 44 CCAGAAT 1450 0.0 62.108562 44 AATCGCA 1610 0.0 61.438217 44 TGTGTTA 3575 0.0 59.920933 42 CGGATAC 100 1.3083263E-7 59.05404 44 TGCACCG 2475 0.0 54.887012 43 TCGCAAA 1580 0.0 54.854794 43 TGGTCAT 2440 0.0 54.66665 43 AACCTTA 4090 0.0 52.94438 41 CTATACG 140 0.0 52.72682 44 >>END_MODULE