ERR840965.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR840965.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4817027
Sequences flagged as poor quality	0
Sequence length	24-50
%GC	53

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	11487	0.23846658945444982	No Hit
TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGC	10616	0.2203848971575206	No Hit
CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGC	9061	0.1881035750889501	No Hit
TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAA	8924	0.1852594971960921	No Hit
ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC	7872	0.1634203005297666	No Hit
TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	6699	0.13906918105296068	No Hit
CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCT	5542	0.11505021665853234	No Hit
CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA	5352	0.11110587505529863	No Hit
TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4935	0.1024490832208331	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAAGCCA	3110	0.0	179.24721	44
CTATCAT	2150	0.0	168.79507	44
AATGCAC	30	1.0773001E-6	166.28152	44
ACGCACC	95	0.0	131.27489	44
CGCTATC	30	2.1336746E-9	122.25341	43
CCGACGA	45	1.8189894E-12	108.6697	43
GCTCGAC	35	6.2354957E-9	104.78863	43
TTAAGCC	2655	0.0	104.29528	43
ACGACAC	230	0.0	103.02224	44
CCGATTG	110	0.0	102.036385	44
ACTTCTA	765	0.0	97.81265	44
CCCGCAT	105	9.094947E-12	95.01801	44
TAACTTC	185	0.0	87.63486	44
AACGACA	535	0.0	86.83419	43
CGATTGC	130	0.0	86.338486	44
CCTATGG	75	1.0214935E-6	83.140755	44
GCGATAC	30	3.730812E-5	81.50227	43
ATGACCG	40	4.1836756E-11	79.9935	42
GTGTTAG	1240	0.0	78.87316	43
AGTTTCG	130	0.0	75.232864	43