##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840965.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4817027 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.2397343838845 39.0 35.0 39.0 31.0 39.0 2 36.87461581593792 39.0 35.0 39.0 33.0 39.0 3 37.05811925073287 39.0 35.0 39.0 33.0 39.0 4 37.6719902130505 39.0 35.0 40.0 34.0 41.0 5 38.30638918984677 40.0 35.0 41.0 35.0 41.0 6 38.33443325104883 40.0 35.0 41.0 35.0 41.0 7 38.30126673568572 40.0 35.0 41.0 35.0 41.0 8 38.205344084639755 40.0 35.0 41.0 34.0 41.0 9 38.11413865855433 40.0 35.0 41.0 34.0 41.0 10 37.99954743870026 40.0 35.0 41.0 34.0 41.0 11 37.920637978570596 40.0 35.0 41.0 34.0 41.0 12 37.91359068570718 40.0 35.0 41.0 34.0 41.0 13 37.805323906218504 39.0 35.0 41.0 34.0 41.0 14 37.82488368863201 39.0 35.0 41.0 34.0 41.0 15 37.792228276901916 39.0 35.0 41.0 34.0 41.0 16 37.750880989456775 39.0 35.0 41.0 34.0 41.0 17 37.76444184348562 39.0 35.0 41.0 34.0 41.0 18 37.802530066781856 39.0 35.0 41.0 34.0 41.0 19 37.86409168974971 40.0 35.0 41.0 34.0 41.0 20 37.89832213936106 40.0 35.0 41.0 34.0 41.0 21 37.83152533710108 40.0 35.0 41.0 34.0 41.0 22 37.76681654472769 40.0 35.0 41.0 34.0 41.0 23 37.65441962438658 39.0 35.0 41.0 33.0 41.0 24 37.54233098548129 39.0 35.0 41.0 33.0 41.0 25 37.46780953614358 39.0 35.0 41.0 33.0 41.0 26 37.399598281385344 39.0 35.0 41.0 33.0 41.0 27 37.35530733565072 39.0 35.0 41.0 33.0 41.0 28 37.285987693325474 38.0 35.0 41.0 33.0 41.0 29 37.1589331628582 38.0 35.0 41.0 33.0 41.0 30 37.06118583296783 38.0 35.0 41.0 33.0 41.0 31 36.95077391711322 38.0 35.0 41.0 33.0 41.0 32 36.84169215399016 37.0 35.0 41.0 33.0 41.0 33 36.749669743079494 37.0 35.0 40.0 33.0 41.0 34 36.71190169259213 37.0 35.0 40.0 33.0 41.0 35 36.56779591112688 36.0 35.0 40.0 33.0 41.0 36 36.529415250708524 36.0 35.0 40.0 33.0 41.0 37 36.49069646460283 36.0 35.0 40.0 33.0 41.0 38 36.41569249634137 36.0 35.0 40.0 33.0 41.0 39 36.33311313652904 35.0 35.0 40.0 33.0 41.0 40 36.230990225426474 35.0 35.0 40.0 33.0 41.0 41 36.14752555433533 35.0 35.0 40.0 33.0 41.0 42 36.08155293662488 35.0 35.0 40.0 33.0 41.0 43 35.96901728232082 35.0 35.0 39.0 32.0 41.0 44 35.79435086076106 35.0 35.0 39.0 32.0 41.0 45 35.6460696249299 35.0 34.0 39.0 31.0 41.0 46 35.38041656758776 35.0 34.0 39.0 31.0 41.0 47 35.25992781587884 35.0 34.0 39.0 31.0 41.0 48 35.281434889975486 35.0 34.0 39.0 31.0 41.0 49 35.306636854627016 35.0 34.0 39.0 31.0 41.0 50 35.5060072667514 36.0 34.0 39.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 7.0 20 22.0 21 69.0 22 231.0 23 545.0 24 1264.0 25 2629.0 26 4898.0 27 9561.0 28 17388.0 29 31186.0 30 54629.0 31 95351.0 32 159215.0 33 295764.0 34 727415.0 35 283973.0 36 366734.0 37 550435.0 38 654336.0 39 785707.0 40 775668.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 43.39697493910663 19.561173312916868 37.0418517479765 2 27.21533427153304 20.122889076602643 29.082232671728846 23.579543980135465 3 24.142443046302212 18.835186101302735 27.28382049758077 29.738550354814286 4 20.95680593029684 20.028287157202982 31.428596933336685 27.5863099791635 5 21.771520068291082 21.036107956214487 30.59727504122356 26.595096934270867 6 25.844800122565225 22.859016567687913 25.907432115286046 25.388751194460816 7 29.9567554842437 20.741548677223523 21.537039339825164 27.76465649870761 8 26.82388950695107 20.88721944053874 24.216721226598896 28.072169825911292 9 26.568213132290936 22.27249297128706 24.808600823703085 26.35069307271892 10 28.552299997488078 19.24608269789644 23.903623542072737 28.297993762542745 11 29.78501054696185 21.56778444463774 22.999559686918925 25.647645321481487 12 28.420060755316506 20.63247725204779 23.81072391747026 27.13673807516545 13 27.040433860968598 20.3479449046061 24.949891291869445 27.66172994255586 14 25.50789107057112 22.035292723084176 21.940939919996296 30.515876286348405 15 25.36101624508229 23.19231343316116 23.526710562344782 27.91995975941177 16 28.06880675570222 23.644833213515305 21.399589414798793 26.886770615983675 17 27.533933274611083 24.326602279787927 19.523286873833175 28.616177571767814 18 26.272408271741053 21.817710384434218 20.5863907343679 31.323490609456826 19 27.41298730524035 22.237575168252118 22.550797410934173 27.79864011557336 20 29.165375240786485 20.46546552468981 22.841038673854225 27.52812056066948 21 29.5843058384352 25.191596393377075 19.36179722471973 25.862300543467992 22 28.901581826300742 24.233951771497235 20.89535724005699 25.96910916214503 23 30.895321948579486 23.827767625134758 20.3456820981074 24.931228328178356 24 30.75828721740609 22.815545771281748 20.85624597910703 25.569921032205134 25 28.907217227013188 24.552629682508016 21.776906502846554 24.76324658763224 26 29.915581540519266 24.82014448931789 21.72359675734986 23.540677212812987 27 27.837916246881278 26.015370738628874 20.67878110148169 25.46793191300816 28 29.16896020898447 23.112397002633507 22.199150152455186 25.519492635926838 29 30.8499078180448 24.459990302023314 21.854245466281192 22.83585641365069 30 29.42478232334845 25.965313858634104 20.204270513516594 24.405633304500853 31 27.342781989427117 24.039279962385642 23.0628530800426 25.55508496814464 32 27.1326820835906 22.251612422296535 24.634652719325185 25.981052774787685 33 26.233096024238765 23.16320111305286 24.378029818482958 26.225673044225413 34 28.042908675829274 23.42064032472383 23.769052954929585 24.76739804451731 35 25.66497405649918 23.617832276375893 23.144285777639805 27.572907889485123 36 27.453209162268617 23.129998424877225 24.37178333529017 25.04500907756399 37 25.337930855405034 25.24720560405826 22.261465115435737 27.153398425100967 38 26.848252705536847 24.915112248099565 21.624690575535134 26.61194447082846 39 26.014711955621735 26.223898919699074 21.034503615916968 26.726885508762226 40 25.884796510819584 25.55046078569465 21.994180748698692 26.57056195478707 41 27.07845906347906 23.833205393314554 21.604179598403014 27.48415594480337 42 26.313234433888915 25.75572182772689 22.06534193983103 25.865701798553157 43 26.919271537362327 23.99736908937489 23.268087217964155 25.81527215529863 44 26.057416549031988 24.016435978515542 22.296561660352882 27.629585812099588 45 27.91136028733763 22.67805571091331 24.928793314307985 24.48179068744108 46 25.472532513124147 25.9295102242396 23.683568472787186 24.914388789849067 47 28.160771119153782 22.708907251301845 21.557666822062576 27.572654807481793 48 25.245547638950583 24.060251577463873 21.329870177494374 29.364330606091166 49 25.463880153572564 24.433324080446877 20.98478597313114 29.11800979284942 50 22.83082335117924 29.147504782446816 22.28247891229827 25.739192954075673 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 91779.0 1 69672.0 2 43366.0 3 33585.5 4 23445.5 5 15914.0 6 10906.0 7 9022.5 8 9217.5 9 10600.0 10 12376.5 11 12565.0 12 11990.5 13 10823.5 14 9434.5 15 8969.5 16 9132.5 17 9852.0 18 11423.0 19 13115.0 20 15178.5 21 17646.0 22 19999.5 23 23577.0 24 27111.0 25 30133.0 26 34200.5 27 38899.0 28 41051.5 29 41856.0 30 45016.0 31 51185.0 32 63177.0 33 75511.0 34 83255.5 35 87953.5 36 92866.5 37 95522.5 38 95410.0 39 105847.5 40 125720.0 41 146087.5 42 165978.0 43 192543.5 44 202893.0 45 184858.5 46 184750.0 47 204020.5 48 223005.0 49 245735.0 50 273670.5 51 291767.5 52 296236.0 53 298658.5 54 296098.5 55 293823.5 56 303452.0 57 316762.5 58 321539.5 59 319967.5 60 319990.0 61 319949.5 62 311705.5 63 299006.0 64 282401.5 65 267518.0 66 249104.0 67 227229.0 68 214809.5 69 207082.0 70 194377.0 71 182989.0 72 174071.5 73 158514.5 74 138781.5 75 123174.0 76 109967.5 77 89425.5 78 70714.0 79 59372.5 80 46936.5 81 34069.0 82 26138.0 83 21733.5 84 18513.5 85 14742.5 86 9447.0 87 5602.0 88 3434.0 89 2376.0 90 1712.0 91 1305.5 92 1125.0 93 895.0 94 701.5 95 399.5 96 275.0 97 275.0 98 139.0 99 3.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 29662.0 25 26321.0 26 21519.0 27 23385.0 28 26502.0 29 31697.0 30 27794.0 31 28840.0 32 34408.0 33 28889.0 34 28210.0 35 21261.0 36 21205.0 37 24408.0 38 28693.0 39 26727.0 40 31298.0 41 34512.0 42 49411.0 43 84886.0 44 212702.0 45 421132.0 46 552628.0 47 601199.0 48 821852.0 49 798996.0 50 778890.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.12079488892838 #Duplication Level Percentage of deduplicated Percentage of total 1 79.47901881824 12.812649603421258 2 9.20242874548165 2.967009325717763 3 2.839173426700183 1.373091973977887 4 1.3348383470465668 0.860746208104556 5 0.7798393953617575 0.6285815469466408 6 0.5409260131373541 0.5232094384723839 7 0.36984526353143854 0.41735397438223887 8 0.2736482213028363 0.35291414778744845 9 0.22658926364966248 0.3287519138996572 >10 2.3009467936972188 8.800800654601703 >50 1.2188126809819595 14.409717756314327 >100 1.3454406218168615 37.999220613725896 >500 0.054163457264900745 6.044056963131271 >1k 0.03229464353353237 9.794659945549675 >5k 0.0015257311905605845 1.781160302821851 >10k+ 5.085770635201948E-4 0.9060756311454862 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 11487 0.23846658945444982 No Hit TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGC 10616 0.2203848971575206 No Hit CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGC 9061 0.1881035750889501 No Hit TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAA 8924 0.1852594971960921 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC 7872 0.1634203005297666 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 6699 0.13906918105296068 No Hit CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCT 5542 0.11505021665853234 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA 5352 0.11110587505529863 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4935 0.1024490832208331 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.02370756900469937 0.0 0.0 0.0 0.0 2 0.043844470873839816 0.0 0.0 0.0 0.0 3 0.05630028646299886 0.0 0.0 0.0 0.0 4 0.06815407096534855 0.0 0.0 0.0 0.0 5 0.08135723548985713 0.0 0.0 0.0 0.0 6 0.10193009090461815 0.0 0.0 0.0 0.0 7 0.11444818557172297 0.0 0.0 0.0 0.0 8 0.1285855362654185 0.0 0.0 0.0 0.0 9 0.1412697084737121 0.0 0.0 0.0 0.0 10 0.15252146188925245 0.0 0.0 0.0 0.0 11 0.1647281611666283 0.0 0.0 0.0 0.0 12 0.17593839519687143 0.0 0.0 0.0 0.0 13 0.18741850523154635 0.0 0.0 0.0 0.0 14 0.1996044448162736 0.0 0.0 0.0 0.0 15 0.2126207721069448 0.0 0.0 0.0 0.0 16 0.22362340921070195 0.0 0.0 0.0 0.0 17 0.2386534266882872 0.0 0.0 0.0 0.0 18 0.25746170822791736 0.0 0.0 0.0 0.0 19 0.26927397334496983 0.0 0.0 0.0 0.0 20 0.28021433137078117 0.0 0.0 0.0 0.0 21 0.2938949688262075 0.0 0.0 0.0 0.0 22 0.3060393890256376 0.0 0.0 0.0 0.0 23 0.31992762340754993 0.0 0.0 0.0 0.0 24 0.3312831752863333 0.0 0.0 0.0 0.0 25 0.34450709950349045 0.0 0.0 0.0 0.0 26 0.3608242179252888 0.0 0.0 0.0 0.0 27 0.37257420396439545 0.0 0.0 0.0 0.0 28 0.38675307404338816 0.0 0.0 0.0 0.0 29 0.4007035875032463 0.0 0.0 0.0 0.0 30 0.4174358997780166 0.0 0.0 0.0 0.0 31 0.43381529727776075 0.0 0.0 0.0 0.0 32 0.4478696092008619 0.0 0.0 0.0 0.0 33 0.4641244485447144 0.0 0.0 0.0 0.0 34 0.4768916595236024 0.0 0.0 0.0 0.0 35 0.48851708740681754 0.0 0.0 0.0 0.0 36 0.49860629803403633 0.0 0.0 0.0 0.0 37 0.5062458649287206 0.0 0.0 0.0 0.0 38 0.512369974260057 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAGCCA 3110 0.0 179.24721 44 CTATCAT 2150 0.0 168.79507 44 AATGCAC 30 1.0773001E-6 166.28152 44 ACGCACC 95 0.0 131.27489 44 CGCTATC 30 2.1336746E-9 122.25341 43 CCGACGA 45 1.8189894E-12 108.6697 43 GCTCGAC 35 6.2354957E-9 104.78863 43 TTAAGCC 2655 0.0 104.29528 43 ACGACAC 230 0.0 103.02224 44 CCGATTG 110 0.0 102.036385 44 ACTTCTA 765 0.0 97.81265 44 CCCGCAT 105 9.094947E-12 95.01801 44 TAACTTC 185 0.0 87.63486 44 AACGACA 535 0.0 86.83419 43 CGATTGC 130 0.0 86.338486 44 CCTATGG 75 1.0214935E-6 83.140755 44 GCGATAC 30 3.730812E-5 81.50227 43 ATGACCG 40 4.1836756E-11 79.9935 42 GTGTTAG 1240 0.0 78.87316 43 AGTTTCG 130 0.0 75.232864 43 >>END_MODULE