##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR840964.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6790252 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.1000317808529 39.0 35.0 39.0 31.0 39.0 2 36.91068063453315 39.0 35.0 39.0 33.0 39.0 3 36.93904659208524 39.0 35.0 39.0 33.0 39.0 4 37.56831940846967 39.0 35.0 40.0 34.0 41.0 5 38.24826781097373 40.0 35.0 41.0 34.0 41.0 6 38.27155104111011 40.0 36.0 41.0 34.0 41.0 7 38.22292324349671 40.0 35.0 41.0 34.0 41.0 8 38.146888804715935 40.0 35.0 41.0 34.0 41.0 9 38.106780131282314 40.0 35.0 41.0 34.0 41.0 10 38.04440556845313 40.0 35.0 41.0 34.0 41.0 11 37.93612298924988 40.0 35.0 41.0 34.0 41.0 12 37.836746559626945 40.0 35.0 41.0 33.0 41.0 13 37.70328361892902 39.0 35.0 41.0 33.0 41.0 14 37.65760077829218 39.0 35.0 41.0 33.0 41.0 15 37.66741558339808 39.0 35.0 41.0 33.0 41.0 16 37.567914121596665 39.0 35.0 41.0 33.0 41.0 17 37.62693652606708 39.0 35.0 41.0 33.0 41.0 18 37.67372227127947 39.0 35.0 41.0 33.0 41.0 19 37.78655136804937 39.0 35.0 41.0 33.0 41.0 20 37.80595300439512 39.0 35.0 41.0 34.0 41.0 21 37.70910564144011 39.0 35.0 41.0 33.0 41.0 22 37.60093160018214 39.0 35.0 41.0 33.0 41.0 23 37.49296226413983 39.0 35.0 41.0 33.0 41.0 24 37.35900817819427 39.0 35.0 41.0 33.0 41.0 25 37.272263683862676 39.0 35.0 41.0 33.0 41.0 26 37.17414007537576 38.0 35.0 41.0 33.0 41.0 27 37.11882329207072 38.0 35.0 41.0 33.0 41.0 28 37.00275550928231 38.0 35.0 41.0 33.0 41.0 29 36.87465224778221 38.0 35.0 41.0 33.0 41.0 30 36.74433309454425 37.0 35.0 40.0 33.0 41.0 31 36.58283427503565 37.0 35.0 40.0 33.0 41.0 32 36.46177909782407 36.0 35.0 40.0 32.0 41.0 33 36.38671511548315 36.0 35.0 40.0 32.0 41.0 34 36.303330730198304 36.0 35.0 40.0 32.0 41.0 35 36.17764272702658 35.0 35.0 40.0 32.0 41.0 36 36.079628816442636 35.0 35.0 40.0 32.0 41.0 37 36.037180992932164 35.0 35.0 40.0 32.0 41.0 38 36.00136769222517 35.0 35.0 40.0 32.0 41.0 39 35.918956303562865 35.0 35.0 40.0 32.0 41.0 40 35.82958513650872 35.0 35.0 39.0 32.0 41.0 41 35.76551309151044 35.0 35.0 39.0 32.0 41.0 42 35.667931649360746 35.0 34.0 39.0 32.0 41.0 43 35.57073052601154 35.0 34.0 39.0 32.0 41.0 44 35.40741520533854 35.0 34.0 39.0 31.0 41.0 45 35.248282973346114 35.0 34.0 39.0 31.0 41.0 46 35.02723990777198 35.0 34.0 38.0 30.0 41.0 47 34.83775343129103 35.0 34.0 38.0 30.0 40.0 48 34.87610637987483 35.0 34.0 38.0 30.0 40.0 49 34.90546755260303 35.0 33.0 37.0 30.0 40.0 50 35.320244450196945 35.0 34.0 38.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 2.0 20 37.0 21 104.0 22 312.0 23 793.0 24 1912.0 25 4154.0 26 7785.0 27 14823.0 28 28396.0 29 51457.0 30 90104.0 31 155126.0 32 256778.0 33 459237.0 34 880267.0 35 443208.0 36 680732.0 37 940050.0 38 937449.0 39 996532.0 40 840992.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 46.02450689606218 18.634448323861914 35.34104478007591 2 30.339846002769853 18.475676602282213 30.05128528366841 21.133192111279524 3 25.665468674800284 18.986997831597414 29.119802917476406 26.227730576125897 4 22.81162760969696 19.545813616342958 30.64186719432504 27.00069157963504 5 21.89681620063585 21.35484809694839 30.37464588943091 26.373689812984853 6 25.644865610289575 24.30825836802522 25.859909175683022 24.186966846002182 7 29.155825144633805 20.833291606850526 23.979051145671765 26.0318321028439 8 29.05881843560445 20.6183511304146 24.565642040972854 25.757188393008096 9 29.759558260871614 21.509938070045116 23.95025987253492 24.780243796548344 10 30.034143062731694 18.71933471688532 23.545120269468644 27.701401950914338 11 29.98776775884017 20.18169576033408 25.035801322248425 24.794735158577325 12 31.097947469401728 20.5418296699445 23.281536532075688 25.078686328578087 13 27.528934124977983 20.27530053376517 24.348580877410736 27.847184463846116 14 24.136718342706573 22.659836483240976 25.330959734631353 27.8724854394211 15 28.60898240595489 23.919112280368974 21.76586377059349 25.70604154308264 16 26.10009171971821 24.881653876763338 22.599131814253727 26.419122589264727 17 29.871969405553727 25.36842520719408 19.518171048732803 25.241434338519397 18 28.639320013454583 22.372910460465974 20.60994201687949 28.377827509199953 19 28.47906086548776 22.345238438867952 21.53067367750122 27.64502701814307 20 28.58737790585681 22.13047468635921 21.93601945848254 27.34612794930144 21 28.198246545194493 27.338764452335496 19.625840101368844 24.837148901101166 22 29.561303468560517 25.319531587340204 20.762395858062412 24.356769086036866 23 28.400934162679086 26.01879871321418 21.231568430744545 24.348698693362188 24 29.343270323398897 26.419034227301136 21.985752516990534 22.251942932309436 25 28.455019203559512 27.442708057361475 20.637091834379635 23.465180904699377 26 28.683618347049872 28.125602967240994 21.4515508541451 21.73922783156403 27 28.56961016769028 27.591471926633925 20.234525620064954 23.604392285610842 28 27.947712509085132 26.65744993023282 20.698840394247235 24.695997166434815 29 28.314194489629653 27.769961319165652 21.10813038987449 22.807713801330205 30 29.4095677407687 26.97404155664366 21.04594205963076 22.57044864295688 31 27.03082547194168 27.294277079509765 21.900563202567806 23.774334245980754 32 26.085554832065327 27.30195489818837 23.25235330502667 23.360136964719633 33 25.34175581327127 25.306944634580407 23.13901394402832 26.212285608120002 34 25.99558875849383 27.363590888102202 23.02771518758973 23.613105165814236 35 25.446683378693947 26.363487864500375 21.921045205101574 26.268783551704107 36 26.226172569746836 27.175943590384882 23.35776590086484 23.24011793900344 37 24.91939274095563 29.230622491025677 21.822137424961983 24.02784734305671 38 26.608144347922753 27.055901502824753 21.511303149791956 24.82465099946054 39 26.151003896669252 27.92413133515031 21.42081822703591 24.504046541144533 40 24.350424904611824 27.849924905516872 22.535552428652835 25.26409776121847 41 25.533091633348352 26.76424020542893 22.332606926832135 25.37006123439058 42 25.04201382026282 27.552198137930723 21.967716957691476 25.438071084114977 43 24.642458847210733 27.478333553820228 21.996191548825053 25.883016050143986 44 25.217630093683486 27.822040335478544 21.887690976607956 25.072638594230018 45 26.49245669550751 25.986809114397758 22.805907230596592 24.714826959498136 46 25.211620763203985 27.55324342541193 22.13073134473116 25.10440446665292 47 25.580233376166056 26.992341374316688 22.477335921748733 24.95008932776853 48 24.887060168411285 27.376609198288627 20.510925688101917 27.22540494519817 49 24.464199031012658 27.606990316788423 21.29436066065946 26.634449991539462 50 23.102607515409318 30.0549033463231 23.948108554357635 22.894380583909943 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 133838.0 1 102175.5 2 73778.0 3 70083.0 4 56030.5 5 37761.5 6 21855.5 7 17572.0 8 19256.0 9 21891.5 10 23593.0 11 23845.0 12 23223.5 13 21333.0 14 20144.0 15 22062.0 16 25102.0 17 27631.0 18 31251.5 19 35700.5 20 39861.5 21 43711.0 22 46983.0 23 57687.5 24 71423.5 25 80462.5 26 95516.5 27 115674.0 28 125877.5 29 122665.0 30 116274.5 31 114362.5 32 116842.5 33 123452.5 34 137726.0 35 145794.0 36 145743.0 37 153111.5 38 163990.0 39 172707.5 40 180112.0 41 201099.5 42 226042.5 43 226145.0 44 219638.0 45 220492.5 46 230950.5 47 252682.5 48 272249.5 49 296625.5 50 336815.5 51 363374.5 52 371375.0 53 370408.5 54 372052.5 55 382186.0 56 394460.5 57 410813.0 58 417942.5 59 418732.0 60 427183.5 61 438410.5 62 433706.0 63 420207.5 64 403043.0 65 384657.5 66 369502.0 67 360130.5 68 343540.0 69 313872.0 70 289663.0 71 273704.5 72 247135.0 73 213468.5 74 187408.0 75 162700.5 76 136561.0 77 105952.0 78 82919.0 79 69690.0 80 55015.0 81 39972.0 82 29502.0 83 23308.0 84 18291.5 85 14522.5 86 11214.5 87 8426.0 88 5181.5 89 2789.0 90 1800.0 91 1006.5 92 700.5 93 693.0 94 492.5 95 195.5 96 95.5 97 70.0 98 89.5 99 109.0 100 109.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 52699.0 25 41501.0 26 34008.0 27 38586.0 28 41904.0 29 45800.0 30 48035.0 31 45184.0 32 50910.0 33 50553.0 34 47800.0 35 39870.0 36 36220.0 37 46203.0 38 49084.0 39 44884.0 40 56048.0 41 55664.0 42 76816.0 43 112972.0 44 281566.0 45 586109.0 46 752913.0 47 809779.0 48 1093515.0 49 1108165.0 50 1143464.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.911437598846163 #Duplication Level Percentage of deduplicated Percentage of total 1 76.51906290719782 14.470854832916554 2 10.340311957557814 3.911003286759148 3 3.518602318746296 1.9962548455837794 4 1.6496939302397589 1.2479233527569789 5 0.9693798837998732 0.9166183591029023 6 0.6772584112474498 0.7684758109559904 7 0.49954351819957177 0.6612960250637492 8 0.3790129894533473 0.5734144399359293 9 0.2950063634343497 0.5021094990016114 >10 2.9739507971592842 13.094509788463915 >50 1.2449940289003651 17.107545781954457 >100 0.865204236046751 27.674155855795778 >500 0.04383451396291586 5.506779032949282 >1k 0.021800052398669383 8.001945466017366 >5k 0.0021096824901938116 2.8543292522543386 >10k+ 2.3440916557709014E-4 0.712784370488251 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 16079 0.23679533543085 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 9147 0.13470781349499253 No Hit AGTGCAGTGCTGCTGTGGGGAAAAAAAAAAAAAAAAAAAAAAAAA 8584 0.1264165159113388 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 8330 0.12267585945263887 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA 7496 0.11039354651344309 No Hit TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 7087 0.10437020599530031 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0343875308309618 0.0 0.0 0.0 0.0 2 0.053930251778579054 0.0 0.0 0.0 0.0 3 0.06663964754179963 0.0 0.0 0.0 0.0 4 0.07967303717152176 0.0 0.0 0.0 0.0 5 0.09286842373449468 0.0 0.0 0.0 0.0 6 0.12115897907765426 0.0 0.0 0.0 0.0 7 0.13323511410180358 0.0 0.0 0.0 0.0 8 0.1475202982157363 0.0 0.0 0.0 0.0 9 0.15962588722774942 0.0 0.0 0.0 0.0 10 0.16909534432595433 0.0 0.0 0.0 0.0 11 0.18130402229549064 0.0 0.0 0.0 0.0 12 0.19393978308905177 0.0 0.0 0.0 1.472699393188942E-5 13 0.20522066044087908 0.0 0.0 0.0 1.472699393188942E-5 14 0.21670771570775282 0.0 0.0 0.0 1.472699393188942E-5 15 0.22865130778651513 0.0 0.0 0.0 1.472699393188942E-5 16 0.24047708391382233 0.0 0.0 0.0 1.472699393188942E-5 17 0.25538080177289446 0.0 0.0 0.0 1.472699393188942E-5 18 0.27389263314527945 0.0 0.0 0.0 1.472699393188942E-5 19 0.29110848905165815 0.0 0.0 0.0 1.472699393188942E-5 20 0.30490768236583854 0.0 0.0 0.0 1.472699393188942E-5 21 0.3274988910573569 0.0 0.0 0.0 1.472699393188942E-5 22 0.34533328070887503 0.0 0.0 0.0 1.472699393188942E-5 23 0.3621662347730246 0.0 0.0 0.0 1.472699393188942E-5 24 0.38010371338206594 0.0 0.0 0.0 1.472699393188942E-5 25 0.3971575723551939 0.0 0.0 0.0 1.472699393188942E-5 26 0.4238576123537094 0.0 0.0 0.0 1.472699393188942E-5 27 0.43982167377587755 0.0 0.0 0.0 1.472699393188942E-5 28 0.4571406186397795 0.0 0.0 0.0 1.472699393188942E-5 29 0.47624152976944006 0.0 0.0 0.0 1.472699393188942E-5 30 0.4954160758687601 0.0 0.0 0.0 1.472699393188942E-5 31 0.514752618901331 0.0 0.0 0.0 1.472699393188942E-5 32 0.5339713459824466 0.0 0.0 0.0 1.472699393188942E-5 33 0.5503477632347077 0.0 0.0 0.0 1.472699393188942E-5 34 0.5641764105367518 0.0 0.0 0.0 1.472699393188942E-5 35 0.5762230915730373 0.0 0.0 0.0 1.472699393188942E-5 36 0.5883728615668461 0.0 0.0 0.0 1.472699393188942E-5 37 0.5955890885934719 0.0 0.0 0.0 1.472699393188942E-5 38 0.6015535211358871 0.0 0.0 0.0 1.472699393188942E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTACGTT 205 0.0 190.05676 44 CTATCAT 3760 0.0 145.69794 44 CGGTTAT 15 2.6383443E-4 119.71555 43 TCGTACA 40 1.5279511E-10 104.75111 43 AATCGCA 340 0.0 104.1755 44 TCATACG 120 0.0 98.38798 44 GTTAAGC 120 4.7293724E-11 78.71038 44 TTGACGC 225 0.0 78.71037 44 ACTTCTA 1375 0.0 74.7033 44 CGTATAT 125 0.0 74.11606 42 AGTAACG 55 0.0 73.23721 42 CCTATCA 4045 0.0 70.142365 43 GTCGGTA 110 7.221388E-10 64.3994 44 CCCTATC 4765 0.0 64.0768 42 ATAAGAT 870 0.0 58.48173 43 TGCATAC 230 0.0 56.04239 42 AATGTCG 25 1.19873785E-5 54.91729 40 TCGCAAA 1050 0.0 54.72711 43 ACCTTAG 1520 0.0 54.590633 42 TAATGCG 130 1.8189894E-12 54.491802 44 >>END_MODULE